RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 CABS1Q96KC9 395 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 C19orf43Q9BQ61 176 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 CCDC134Q9H6E4 229 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 SUDS3Q9H7L9 328 aaPredicted RBP13.75□□□□□ -0.21
TRAF4-210ENST00000475329 BRD9Q9H8M2 597 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 MLXIPLQ9NP71 852 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 FBXO6Q9NRD1 293 aaPredicted RBP13.75□□□□□ -0.21
TRAF4-210ENST00000475329 SNX15Q9NRS6 342 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 IL36AQ9UHA7 158 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 PPIL1Q9Y3C6 166 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 NUMBLQ9Y6R0 609 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 PLXNA2O75051 1894 aa13.75□□□□□ -0.21
TRAF4-210ENST00000475329 CKAP5Q14008 2032 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 C1orf232A0A0U1RR37 186 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 EDDM13A0A1B0GTR0 161 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 FAM95CA0A1B0GW59 222 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 TSPAN11A1L157 253 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 ANHXE9PGG2 379 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 ARNTLO00327 626 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 GLRA3O75311 464 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 APODP05090 189 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 MPOP05164 745 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 NFKBIAP25963 317 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 GABRB3P28472 473 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 TYK2P29597 1187 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 HNF1BP35680 557 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 HMGCLP35914 325 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 LEPRP48357 1165 aaKnown RBP13.74□□□□□ -0.21
TRAF4-210ENST00000475329 CCT5P48643 541 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 POLR2LP62875 67 aaKnown RBP13.74□□□□□ -0.21
TRAF4-210ENST00000475329 IL9RQ01113 521 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 PTPRRQ15256 657 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 FASTKD1Q53R41 847 aaKnown RBP13.74□□□□□ -0.21
TRAF4-210ENST00000475329 BRAT1Q6PJG6 821 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 LVRNQ6Q4G3 990 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 NUDT18Q6ZVK8 323 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 MICALCLQ6ZW33 695 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 SDCCAG8Q86SQ7 713 aaPredicted RBP13.74□□□□□ -0.21
TRAF4-210ENST00000475329 ZSWIM9Q86XI8 627 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 GDAP1Q8TB36 358 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 CSGALNACT1Q8TDX6 532 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 KLHL32Q96NJ5 620 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 LYSMD1Q96S90 227 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 PAIP2Q9BPZ3 127 aaKnown RBP13.74□□□□□ -0.21
TRAF4-210ENST00000475329 RPP25Q9BUL9 199 aaKnown RBP13.74□□□□□ -0.21
TRAF4-210ENST00000475329 ZFYVE1Q9HBF4 777 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.74□□□□□ -0.21
TRAF4-210ENST00000475329 IL17CQ9P0M4 197 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 MARCH4Q9P2E8 410 aaPredicted RBP13.74□□□□□ -0.21
TRAF4-210ENST00000475329 FKBPLQ9UIM3 349 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 SLC39A10Q9ULF5 831 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 CORO1CQ9ULV4 474 aaPredicted RBP13.74□□□□□ -0.21
TRAF4-210ENST00000475329 WASF2Q9Y6W5 498 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 BRWD1Q9NSI6 2320 aa13.74□□□□□ -0.21
TRAF4-210ENST00000475329 TBC1D3BA6NDS4 549 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 GRXCR2A6NFK2 248 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 H3BQ06 376 aaPredicted RBP13.73□□□□□ -0.21
TRAF4-210ENST00000475329 H7C0S8 307 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 LEFTY1O75610 366 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 KAT7O95251 611 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 ASMTLO95671 621 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 MC4RP32245 332 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 CRHR1P34998 444 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 GRIA2P42262 883 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 WDR4P57081 412 aaKnown RBP13.73□□□□□ -0.21
TRAF4-210ENST00000475329 SMAD4Q13485 552 aaKnown RBP13.73□□□□□ -0.21
TRAF4-210ENST00000475329 PDE1CQ14123 709 aaPredicted RBP13.73□□□□□ -0.21
TRAF4-210ENST00000475329 ZNF234Q14588 700 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 USP10Q14694 798 aaKnown RBP13.73□□□□□ -0.21
TRAF4-210ENST00000475329 TYSND1Q2T9J0 566 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 HNRNPA1L2Q32P51 320 aaKnown RBP13.73□□□□□ -0.21
TRAF4-210ENST00000475329 TAF1BQ53T94 588 aaPredicted RBP13.73□□□□□ -0.21
TRAF4-210ENST00000475329 ARSIQ5FYB1 569 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 NAIF1Q69YI7 327 aaPredicted RBP13.73□□□□□ -0.21
TRAF4-210ENST00000475329 CNSTQ6PJW8 725 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 TPRG1Q6ZUI0 275 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 CMC1Q7Z7K0 106 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 SLC41A1Q8IVJ1 513 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 GPATCH11Q8N954 259 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 CKAP2Q8WWK9 683 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 SCRN2Q96FV2 425 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 ELMO2Q96JJ3 720 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 FAM161BQ96MY7 647 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 MCCC1Q96RQ3 725 aaPredicted RBP13.73□□□□□ -0.21
TRAF4-210ENST00000475329 SLC13A1Q9BZW2 595 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 EPN3Q9H201 632 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 MTG2Q9H4K7 406 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 BPIFA1Q9NP55 256 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 INTS10Q9NVR2 710 aaKnown RBP13.73□□□□□ -0.21
TRAF4-210ENST00000475329 SLC17A7Q9P2U7 560 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 ANKRD6Q9Y2G4 727 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 REV3LO60673 3130 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 LRRK1Q38SD2 2015 aa13.73□□□□□ -0.21
TRAF4-210ENST00000475329 NPIPB15A6NHN6 443 aaPredicted RBP13.72□□□□□ -0.21
TRAF4-210ENST00000475329 UPK3BL1B0FP48 263 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 UPK3BL2E5RIL1 263 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 SOX1O00570 391 aaPredicted RBP13.72□□□□□ -0.21
TRAF4-210ENST00000475329 PFDN6O15212 129 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 HAUS5O94927 633 aa13.72□□□□□ -0.21
TRAF4-210ENST00000475329 S1PR4O95977 384 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms