RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 SAP25Q8TEE9 199 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 IFT43Q96FT9 208 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 OXNAD1Q96HP4 312 aaPredicted RBP16.24■□□□□ 0.19
SRM-204ENST00000475189 CAMK1GQ96NX5 476 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 LYSMD1Q96S90 227 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 FERMT1Q9BQL6 677 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 MLPHQ9BV36 600 aaPredicted RBP16.24■□□□□ 0.19
SRM-204ENST00000475189 ADGRE3Q9BY15 652 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 CAAP1Q9H8G2 361 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 FAM153AQ9UHL3 310 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 BTBD3Q9Y2F9 522 aa16.24■□□□□ 0.19
SRM-204ENST00000475189 FLRT2O43155 660 aa16.23■□□□□ 0.19
SRM-204ENST00000475189 CBFA2T3O75081 653 aa16.23■□□□□ 0.19
SRM-204ENST00000475189 CLDN7O95471 211 aa16.23■□□□□ 0.19
SRM-204ENST00000475189 CEACAM1P13688 526 aa16.23■□□□□ 0.19
SRM-204ENST00000475189 ZNF30P17039 623 aa16.23■□□□□ 0.19
SRM-204ENST00000475189 ETV3P41162 512 aa16.23■□□□□ 0.19
SRM-204ENST00000475189 NOVA1P51513 510 aaKnown RBP16.23■□□□□ 0.19
SRM-204ENST00000475189 MTM1Q13496 603 aa16.23■□□□□ 0.19
SRM-204ENST00000475189 CDKN3Q16667 212 aa16.23■□□□□ 0.19
SRM-204ENST00000475189 ANKRD20A2Q5SQ80 823 aa16.23■□□□□ 0.19
SRM-204ENST00000475189 ANKRD20A1Q5TYW2 823 aa16.23■□□□□ 0.19
SRM-204ENST00000475189 ANKRD20A3Q5VUR7 823 aa16.23■□□□□ 0.19
SRM-204ENST00000475189 Q6ZVL8 140 aa16.23■□□□□ 0.19
SRM-204ENST00000475189 KANSL1Q7Z3B3 1105 aa16.23■□□□□ 0.19
SRM-204ENST00000475189 GATAD2AQ86YP4 633 aa16.23■□□□□ 0.19
SRM-204ENST00000475189 SETD7Q8WTS6 366 aaKnown RBP16.23■□□□□ 0.19
SRM-204ENST00000475189 NUS1Q96E22 293 aa16.23■□□□□ 0.19
SRM-204ENST00000475189 DTD2Q96FN9 168 aa16.23■□□□□ 0.19
SRM-204ENST00000475189 GORASP1Q9BQQ3 440 aa16.23■□□□□ 0.19
SRM-204ENST00000475189 APOOQ9BUR5 198 aa16.23■□□□□ 0.19
SRM-204ENST00000475189 GBA3Q9H227 469 aa16.23■□□□□ 0.19
SRM-204ENST00000475189 SLC32A1Q9H598 525 aa16.23■□□□□ 0.19
SRM-204ENST00000475189 KCTD5Q9NXV2 234 aa16.23■□□□□ 0.19
SRM-204ENST00000475189 RSPH14Q9UHP6 348 aa16.23■□□□□ 0.19
SRM-204ENST00000475189 DNPEPQ9ULA0 475 aa16.23■□□□□ 0.19
SRM-204ENST00000475189 LOC285095A0A1B0GVY8 99 aa16.22■□□□□ 0.19
SRM-204ENST00000475189 ZNF189O75820 626 aaPredicted RBP16.22■□□□□ 0.19
SRM-204ENST00000475189 STK10O94804 968 aaKnown RBP16.22■□□□□ 0.19
SRM-204ENST00000475189 NDST3O95803 873 aa16.22■□□□□ 0.19
SRM-204ENST00000475189 ITGAVP06756 1048 aa16.22■□□□□ 0.19
SRM-204ENST00000475189 C1SP09871 688 aa16.22■□□□□ 0.19
SRM-204ENST00000475189 TRIM23P36406 574 aa16.22■□□□□ 0.19
SRM-204ENST00000475189 STC1P52823 247 aa16.22■□□□□ 0.19
SRM-204ENST00000475189 THOP1P52888 689 aa16.22■□□□□ 0.19
SRM-204ENST00000475189 WNT3AP56704 352 aa16.22■□□□□ 0.19
SRM-204ENST00000475189 EIF2B5Q13144 721 aaKnown RBP16.22■□□□□ 0.19
SRM-204ENST00000475189 PTK2BQ14289 1009 aa16.22■□□□□ 0.19
SRM-204ENST00000475189 ZNF542PQ5EBM4 170 aa16.22■□□□□ 0.19
SRM-204ENST00000475189 ITPRIPL1Q6GPH6 555 aa16.22■□□□□ 0.19
SRM-204ENST00000475189 PSAPL1Q6NUJ1 521 aa16.22■□□□□ 0.19
SRM-204ENST00000475189 ESRP1Q6NXG1 681 aaKnown RBP16.22■□□□□ 0.19
SRM-204ENST00000475189 PNCKQ6P2M8 343 aa16.22■□□□□ 0.19
SRM-204ENST00000475189 RFLNAQ6ZTI6 216 aa16.22■□□□□ 0.19
SRM-204ENST00000475189 ERMP1Q7Z2K6 904 aa16.22■□□□□ 0.19
SRM-204ENST00000475189 PARGQ86W56 976 aa16.22■□□□□ 0.19
SRM-204ENST00000475189 CCDC110Q8TBZ0 833 aa16.22■□□□□ 0.19
SRM-204ENST00000475189 ATG4AQ8WYN0 398 aa16.22■□□□□ 0.19
SRM-204ENST00000475189 MRGPRX2Q96LB1 330 aa16.22■□□□□ 0.19
SRM-204ENST00000475189 DNAJC28Q9NX36 388 aa16.22■□□□□ 0.19
SRM-204ENST00000475189 TRMT1Q9NXH9 659 aaKnown RBP16.22■□□□□ 0.19
SRM-204ENST00000475189 PCOLCE2Q9UKZ9 415 aa16.22■□□□□ 0.19
SRM-204ENST00000475189 PNMA8BQ9ULN7 279 aaPredicted RBP16.22■□□□□ 0.19
SRM-204ENST00000475189 OR1A2Q9Y585 309 aa16.22■□□□□ 0.19
SRM-204ENST00000475189 SCN8AQ9UQD0 1980 aa16.21■□□□□ 0.19
SRM-204ENST00000475189 C1orf232A0A0U1RR37 186 aa16.21■□□□□ 0.19
SRM-204ENST00000475189 C5orf60A6NFR6 353 aa16.21■□□□□ 0.19
SRM-204ENST00000475189 K7ESM1 405 aa16.21■□□□□ 0.19
SRM-204ENST00000475189 ENC1O14682 589 aa16.21■□□□□ 0.19
SRM-204ENST00000475189 SDC3O75056 442 aa16.21■□□□□ 0.19
SRM-204ENST00000475189 CSF2P04141 144 aa16.21■□□□□ 0.19
SRM-204ENST00000475189 GRK6P43250 576 aa16.21■□□□□ 0.19
SRM-204ENST00000475189 MPP3Q13368 585 aa16.21■□□□□ 0.19
SRM-204ENST00000475189 SIX1Q15475 284 aaPredicted RBP16.21■□□□□ 0.19
SRM-204ENST00000475189 MACC1Q6ZN28 852 aa16.21■□□□□ 0.19
SRM-204ENST00000475189 BAHD1Q8TBE0 780 aaPredicted RBP16.21■□□□□ 0.19
SRM-204ENST00000475189 RHBDD1Q8TEB9 315 aa16.21■□□□□ 0.19
SRM-204ENST00000475189 SPATA13Q96N96 652 aa16.21■□□□□ 0.19
SRM-204ENST00000475189 TMEM121Q9BTD3 319 aa16.21■□□□□ 0.19
SRM-204ENST00000475189 ABCG8Q9H221 673 aa16.21■□□□□ 0.19
SRM-204ENST00000475189 MAGEE1Q9HCI5 957 aa16.21■□□□□ 0.19
SRM-204ENST00000475189 KLF15Q9UIH9 416 aa16.21■□□□□ 0.19
SRM-204ENST00000475189 JRKLQ9Y4A0 524 aa16.21■□□□□ 0.19
SRM-204ENST00000475189 COL5A1P20908 1838 aaPredicted RBP16.21■□□□□ 0.19
SRM-204ENST00000475189 LIASO43766 372 aa16.2■□□□□ 0.18
SRM-204ENST00000475189 PIAS2O75928 621 aa16.2■□□□□ 0.18
SRM-204ENST00000475189 ANXA9O76027 345 aa16.2■□□□□ 0.18
SRM-204ENST00000475189 EPOP01588 193 aa16.2■□□□□ 0.18
SRM-204ENST00000475189 HOXC4P09017 264 aaPredicted RBP16.2■□□□□ 0.18
SRM-204ENST00000475189 ATXN1LP0C7T5 689 aaKnown RBP16.2■□□□□ 0.18
SRM-204ENST00000475189 PIRTP0C851 137 aa16.2■□□□□ 0.18
SRM-204ENST00000475189 NME1P15531 152 aaKnown RBP16.2■□□□□ 0.18
SRM-204ENST00000475189 DGKAP23743 735 aa16.2■□□□□ 0.18
SRM-204ENST00000475189 PSMB4P28070 264 aa16.2■□□□□ 0.18
SRM-204ENST00000475189 CXCR5P32302 372 aa16.2■□□□□ 0.18
SRM-204ENST00000475189 GEMP55040 296 aa16.2■□□□□ 0.18
SRM-204ENST00000475189 GDF10P55107 478 aa16.2■□□□□ 0.18
SRM-204ENST00000475189 DPTQ07507 201 aa16.2■□□□□ 0.18
SRM-204ENST00000475189 NFATC4Q14934 902 aa16.2■□□□□ 0.18
SRM-204ENST00000475189 OASLQ15646 514 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms