RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 LMO7DNF2Z398 122 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 OPA1O60313 960 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 PGLSO95336 258 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 MT-CO3P00414 261 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 TNFP01375 233 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 GP1BAP07359 652 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 CELA2BP08218 269 aaPredicted RBP9.44□□□□□ -0.9
PDPN-204ENST00000475043 PDHA1P08559 390 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 ALPIP09923 528 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 KRT10P13645 584 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 CCNB1P14635 433 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 CTPS1P17812 591 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 MX2P20592 715 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 KDELR1P24390 212 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 ARHGAP25P42331 645 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 EPHB1P54762 984 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 DSC2Q02487 901 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 PTPRRQ15256 657 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 NR0B2Q15466 257 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 CNGA3Q16281 694 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 ESRP1Q6NXG1 681 aaKnown RBP9.44□□□□□ -0.9
PDPN-204ENST00000475043 PNCKQ6P2M8 343 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 GUSBP11Q6P575 273 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 CRTC1Q6UUV9 634 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 USP45Q70EL2 814 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 EFL1Q7Z2Z2 1120 aaKnown RBP9.44□□□□□ -0.9
PDPN-204ENST00000475043 GKN2Q86XP6 184 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 NDUFAF2Q8N183 169 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 FSTL5Q8N475 847 aaPredicted RBP9.44□□□□□ -0.9
PDPN-204ENST00000475043 TEX26Q8N6G2 289 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 PQLC3Q8N755 202 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 OR56A4Q8NGH8 313 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 RFFLQ8WZ73 363 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 RAPGEF5Q92565 580 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 FUBP1Q96AE4 644 aaKnown RBP9.44□□□□□ -0.9
PDPN-204ENST00000475043 FAF2Q96CS3 445 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 NUS1Q96E22 293 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 PDXPQ96GD0 296 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 TBATAQ96M53 351 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 RNF157Q96PX1 679 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 MAK16Q9BXY0 300 aaKnown RBP9.44□□□□□ -0.9
PDPN-204ENST00000475043 CLPBQ9H078 707 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 WDR26Q9H7D7 661 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 SUDS3Q9H7L9 328 aaPredicted RBP9.44□□□□□ -0.9
PDPN-204ENST00000475043 SYNDIG1Q9H7V2 258 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 DTLQ9NZJ0 730 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 SIRPGQ9P1W8 387 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 GULP1Q9UBP9 304 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 RALYQ9UKM9 306 aaKnown RBP9.44□□□□□ -0.9
PDPN-204ENST00000475043 HYOU1Q9Y4L1 999 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 HEY1Q9Y5J3 304 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 RAI2Q9Y5P3 530 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 U3KQA8 63 aa9.44□□□□□ -0.9
PDPN-204ENST00000475043 A0A0U1RQS6 177 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 EME2A4GXA9 379 aaPredicted RBP9.43□□□□□ -0.9
PDPN-204ENST00000475043 TMEM202A6NGA9 273 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 PDE2AO00408 941 aaPredicted RBP9.43□□□□□ -0.9
PDPN-204ENST00000475043 SPOPO43791 374 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 HEXIM1O94992 359 aaKnown RBP9.43□□□□□ -0.9
PDPN-204ENST00000475043 KRT1P04264 644 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 GM2AP17900 193 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 CA4P22748 312 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 LHCGRP22888 699 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 KELP23276 732 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 ETV3P41162 512 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 NOP2P46087 812 aaKnown RBP9.43□□□□□ -0.9
PDPN-204ENST00000475043 KIAA1024LP59773 190 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 DYNLT1P63172 113 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 AP1B1Q10567 949 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 SLC10A2Q12908 348 aaPredicted RBP9.43□□□□□ -0.9
PDPN-204ENST00000475043 TBX2Q13207 712 aaPredicted RBP9.43□□□□□ -0.9
PDPN-204ENST00000475043 BRICD5Q6PL45 260 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 C19orf48Q6RUI8 117 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 SARM1Q6SZW1 724 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 HSD11B1LQ7Z5J1 315 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 TSPAN33Q86UF1 283 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 RFX6Q8HWS3 928 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 RHOT1Q8IXI2 618 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 SLC35F3Q8IY50 421 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 CCDC13Q8IYE1 715 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 DCBLD1Q8N8Z6 715 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 TPCN2Q8NHX9 752 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 HNRNPLLQ8WVV9 542 aaKnown RBP9.43□□□□□ -0.9
PDPN-204ENST00000475043 PIH1D2Q8WWB5 315 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 OR1E3Q8WZA6 343 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 MAML1Q92585 1016 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 HDAC11Q96DB2 347 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 SCRN2Q96FV2 425 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 COQ10AQ96MF6 247 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 TSGA13Q96PP4 275 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 DEPDC7Q96QD5 511 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 LGMNQ99538 433 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 BOCQ9BWV1 1114 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 LGR4Q9BXB1 951 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 NRSN2Q9GZP1 204 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 CYP4F12Q9HCS2 524 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 FGF22Q9HCT0 170 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 MRPL40Q9NQ50 206 aaKnown RBP9.43□□□□□ -0.9
PDPN-204ENST00000475043 KCTD5Q9NXV2 234 aa9.43□□□□□ -0.9
PDPN-204ENST00000475043 DKK4Q9UBT3 224 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms