RNA–Protein interactions for RNA: ENST00000474805.5

TRIM13-207, Transcript of tripartite motif containing 13, humanhuman

TSL 5

Gene TRIM13, Length 403 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-207ENST00000474805 ELFN1P0C7U0 828 aa12.42□□□□□ -0.42
TRIM13-207ENST00000474805 CYP11B1P15538 503 aa12.42□□□□□ -0.42
TRIM13-207ENST00000474805 TCN2P20062 427 aa12.42□□□□□ -0.42
TRIM13-207ENST00000474805 GNLYP22749 145 aa12.42□□□□□ -0.42
TRIM13-207ENST00000474805 GNPDA1P46926 289 aa12.42□□□□□ -0.42
TRIM13-207ENST00000474805 RAB15P59190 212 aa12.42□□□□□ -0.42
TRIM13-207ENST00000474805 BPIFB4P59827 614 aa12.42□□□□□ -0.42
TRIM13-207ENST00000474805 ILF3Q12906 894 aaKnown RBP eCLIP12.42□□□□□ -0.42
TRIM13-207ENST00000474805 PAK1Q13153 545 aa12.42□□□□□ -0.42
TRIM13-207ENST00000474805 SQSTM1Q13501 440 aa12.42□□□□□ -0.42
TRIM13-207ENST00000474805 ESPL1Q14674 2120 aa12.42□□□□□ -0.42
TRIM13-207ENST00000474805 GRM3Q14832 879 aa12.42□□□□□ -0.42
TRIM13-207ENST00000474805 SNAP47Q5SQN1 464 aa12.42□□□□□ -0.42
TRIM13-207ENST00000474805 FHL5Q5TD97 284 aa12.42□□□□□ -0.42
TRIM13-207ENST00000474805 TMEM71Q6P5X7 295 aa12.42□□□□□ -0.42
TRIM13-207ENST00000474805 BRAT1Q6PJG6 821 aa12.42□□□□□ -0.42
TRIM13-207ENST00000474805 KDELC2Q7Z4H8 507 aa12.42□□□□□ -0.42
TRIM13-207ENST00000474805 FAM71AQ8IYT1 594 aa12.42□□□□□ -0.42
TRIM13-207ENST00000474805 PYROXD2Q8N2H3 581 aa12.42□□□□□ -0.42
TRIM13-207ENST00000474805 GPT2Q8TD30 523 aa12.42□□□□□ -0.42
TRIM13-207ENST00000474805 PTCD2Q8WV60 388 aaKnown RBP12.42□□□□□ -0.42
TRIM13-207ENST00000474805 STARD8Q92502 1023 aa12.42□□□□□ -0.42
TRIM13-207ENST00000474805 TIGD1Q96MW7 591 aa12.42□□□□□ -0.42
TRIM13-207ENST00000474805 EFHD1Q9BUP0 239 aa12.42□□□□□ -0.42
TRIM13-207ENST00000474805 WDR26Q9H7D7 661 aa12.42□□□□□ -0.42
TRIM13-207ENST00000474805 MRPS18BQ9Y676 258 aaKnown RBP12.42□□□□□ -0.42
TRIM13-207ENST00000474805 MED13Q9UHV7 2174 aa12.42□□□□□ -0.42
TRIM13-207ENST00000474805 PDE2AO00408 941 aaPredicted RBP12.41□□□□□ -0.42
TRIM13-207ENST00000474805 VPS4BO75351 444 aa12.41□□□□□ -0.42
TRIM13-207ENST00000474805 FGFR1OPO95684 399 aaKnown RBP12.41□□□□□ -0.42
TRIM13-207ENST00000474805 CEACAM5P06731 702 aa12.41□□□□□ -0.42
TRIM13-207ENST00000474805 SDC4P31431 198 aa12.41□□□□□ -0.42
TRIM13-207ENST00000474805 RGRP47804 291 aa12.41□□□□□ -0.42
TRIM13-207ENST00000474805 PPM1FP49593 454 aaPredicted RBP12.41□□□□□ -0.42
TRIM13-207ENST00000474805 CTBSQ01459 385 aa12.41□□□□□ -0.42
TRIM13-207ENST00000474805 MC2RQ01718 297 aa12.41□□□□□ -0.42
TRIM13-207ENST00000474805 MC1RQ01726 317 aa12.41□□□□□ -0.42
TRIM13-207ENST00000474805 ABHD18Q0P651 414 aa12.41□□□□□ -0.42
TRIM13-207ENST00000474805 ACOX1Q15067 660 aa12.41□□□□□ -0.42
TRIM13-207ENST00000474805 CAPRIN2Q6IMN6 1127 aaKnown RBP12.41□□□□□ -0.42
TRIM13-207ENST00000474805 ARCQ7LC44 396 aa12.41□□□□□ -0.42
TRIM13-207ENST00000474805 ZNF761Q86XN6 746 aaPredicted RBP12.41□□□□□ -0.42
TRIM13-207ENST00000474805 RTL3Q8N8U3 475 aaKnown RBP12.41□□□□□ -0.42
TRIM13-207ENST00000474805 TEFMQ96QE5 360 aaKnown RBP12.41□□□□□ -0.42
TRIM13-207ENST00000474805 ZMYND15Q9H091 742 aa12.41□□□□□ -0.42
TRIM13-207ENST00000474805 APMAPQ9HDC9 416 aa12.41□□□□□ -0.42
TRIM13-207ENST00000474805 PRDM8Q9NQV8 689 aa12.41□□□□□ -0.42
TRIM13-207ENST00000474805 TRNAU1APQ9NX07 287 aaKnown RBP12.41□□□□□ -0.42
TRIM13-207ENST00000474805 UBA2Q9UBT2 640 aaPredicted RBP12.41□□□□□ -0.42
TRIM13-207ENST00000474805 SUFUQ9UMX1 484 aa12.41□□□□□ -0.42
TRIM13-207ENST00000474805 VPS4AQ9UN37 437 aa12.41□□□□□ -0.42
TRIM13-207ENST00000474805 PLEKHM1Q9Y4G2 1056 aa12.41□□□□□ -0.42
TRIM13-207ENST00000474805 KCNMB2Q9Y691 235 aa12.41□□□□□ -0.42
TRIM13-207ENST00000474805 TRBV23OR9-2A0A075B6M9 112 aa12.4□□□□□ -0.42
TRIM13-207ENST00000474805 A1L4Q6 167 aa12.4□□□□□ -0.42
TRIM13-207ENST00000474805 GTPBP10A4D1E9 387 aaKnown RBP12.4□□□□□ -0.42
TRIM13-207ENST00000474805 J3KR12 359 aa12.4□□□□□ -0.42
TRIM13-207ENST00000474805 SEMA7AO75326 666 aa12.4□□□□□ -0.42
TRIM13-207ENST00000474805 STK17BO94768 372 aa12.4□□□□□ -0.42
TRIM13-207ENST00000474805 RNF224P0DH78 156 aa12.4□□□□□ -0.42
TRIM13-207ENST00000474805 MYCLP1P12525 358 aaPredicted RBP12.4□□□□□ -0.42
TRIM13-207ENST00000474805 F8A1P23610 371 aa12.4□□□□□ -0.42
TRIM13-207ENST00000474805 EPHB2P29323 1055 aa12.4□□□□□ -0.42
TRIM13-207ENST00000474805 POLD2P49005 469 aa12.4□□□□□ -0.42
TRIM13-207ENST00000474805 HDAC4P56524 1084 aa12.4□□□□□ -0.42
TRIM13-207ENST00000474805 YBEYP58557 167 aaPredicted RBP12.4□□□□□ -0.42
TRIM13-207ENST00000474805 NAA35Q5VZE5 725 aa12.4□□□□□ -0.42
TRIM13-207ENST00000474805 AFMIDQ63HM1 303 aa12.4□□□□□ -0.42
TRIM13-207ENST00000474805 TCTN3Q6NUS6 607 aa12.4□□□□□ -0.42
TRIM13-207ENST00000474805 CEACAM20Q6UY09 585 aa12.4□□□□□ -0.42
TRIM13-207ENST00000474805 ASB18Q6ZVZ8 466 aa12.4□□□□□ -0.42
TRIM13-207ENST00000474805 SRLQ86TD4 932 aa12.4□□□□□ -0.42
TRIM13-207ENST00000474805 PAF1Q8N7H5 531 aa12.4□□□□□ -0.42
TRIM13-207ENST00000474805 JOSD2Q8TAC2 188 aa12.4□□□□□ -0.42
TRIM13-207ENST00000474805 SSC4DQ8WTU2 575 aa12.4□□□□□ -0.42
TRIM13-207ENST00000474805 RNF31Q96EP0 1072 aa12.4□□□□□ -0.42
TRIM13-207ENST00000474805 TUBGCP5Q96RT8 1024 aa12.4□□□□□ -0.42
TRIM13-207ENST00000474805 DPYSL5Q9BPU6 564 aa12.4□□□□□ -0.42
TRIM13-207ENST00000474805 SHANK1Q9Y566 2161 aa12.4□□□□□ -0.42
TRIM13-207ENST00000474805 MKRN2OSH3BPM6 223 aa12.39□□□□□ -0.43
TRIM13-207ENST00000474805 MMEP08473 750 aa12.39□□□□□ -0.43
TRIM13-207ENST00000474805 SERPINA4P29622 427 aa12.39□□□□□ -0.43
TRIM13-207ENST00000474805 ADCY8P40145 1251 aa12.39□□□□□ -0.43
TRIM13-207ENST00000474805 NOMO3P69849 1222 aa12.39□□□□□ -0.43
TRIM13-207ENST00000474805 RAPGEF1Q13905 1077 aa12.39□□□□□ -0.43
TRIM13-207ENST00000474805 PARP15Q460N3 678 aa12.39□□□□□ -0.43
TRIM13-207ENST00000474805 ZNF787Q6DD87 383 aa12.39□□□□□ -0.43
TRIM13-207ENST00000474805 SMYD5Q6GMV2 418 aa12.39□□□□□ -0.43
TRIM13-207ENST00000474805 DPPA4Q7L190 304 aa12.39□□□□□ -0.43
TRIM13-207ENST00000474805 STRADAQ7RTN6 431 aa12.39□□□□□ -0.43
TRIM13-207ENST00000474805 NOP9Q86U38 636 aaKnown RBP12.39□□□□□ -0.43
TRIM13-207ENST00000474805 HEATR4Q86WZ0 1026 aa12.39□□□□□ -0.43
TRIM13-207ENST00000474805 CCDC13Q8IYE1 715 aa12.39□□□□□ -0.43
TRIM13-207ENST00000474805 TSEN2Q8NCE0 465 aaKnown RBP12.39□□□□□ -0.43
TRIM13-207ENST00000474805 MSANTD4Q8NCY6 345 aa12.39□□□□□ -0.43
TRIM13-207ENST00000474805 FAM172AQ8WUF8 416 aa12.39□□□□□ -0.43
TRIM13-207ENST00000474805 CENPIQ92674 756 aaPredicted RBP12.39□□□□□ -0.43
TRIM13-207ENST00000474805 AHCYL2Q96HN2 611 aaKnown RBP12.39□□□□□ -0.43
TRIM13-207ENST00000474805 TEX101Q9BY14 249 aa12.39□□□□□ -0.43
TRIM13-207ENST00000474805 FRMD8Q9BZ67 464 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms