RNA–Protein interactions for RNA: ENST00000474006.1

CCDC93-207, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-207ENST00000474006 NPY2RP49146 381 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 DGKEP52429 567 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 METAP1P53582 386 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 EPHB1P54762 984 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 RPL26P61254 145 aaKnown RBP7.62□□□□□ -1.19
CCDC93-207ENST00000474006 CDH17Q12864 832 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 MTAPQ13126 283 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 MTM1Q13496 603 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 CUL1Q13616 776 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 GALNT3Q14435 633 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 PTPRRQ15256 657 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 CST6Q15828 149 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 FNBP1LQ5T0N5 605 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 CERCAMQ5T4B2 595 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 CFAP58Q5T655 872 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 ZNF776Q68DI1 518 aaPredicted RBP7.62□□□□□ -1.19
CCDC93-207ENST00000474006 NAPEPLDQ6IQ20 393 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 BRAT1Q6PJG6 821 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.62□□□□□ -1.19
CCDC93-207ENST00000474006 ZSWIM9Q86XI8 627 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 GALNT12Q8IXK2 581 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 SPEM1Q8N4L4 309 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 HDDC3Q8N4P3 179 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 PAF1Q8N7H5 531 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 DNAAF3Q8N9W5 541 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 LPCAT1Q8NF37 534 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 MYRIPQ8NFW9 859 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 FBXO25Q8TCJ0 367 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 ARRDC3Q96B67 414 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 ECHDC3Q96DC8 303 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 SIPA1Q96FS4 1042 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 MRGPRX1Q96LB2 322 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 SMIM14Q96QK8 99 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 HDAC8Q9BY41 377 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 SLC6A17Q9H1V8 727 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 FBRSQ9HAH7 460 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 CASS4Q9NQ75 786 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 ZDHHC18Q9NUE0 388 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 PIH1D1Q9NWS0 290 aaKnown RBP7.62□□□□□ -1.19
CCDC93-207ENST00000474006 DLGAP2Q9P1A6 1054 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 DKK3Q9UBP4 350 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 VTI1BQ9UEU0 232 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 ATXN7L1Q9ULK2 861 aaPredicted RBP7.62□□□□□ -1.19
CCDC93-207ENST00000474006 NFU1Q9UMS0 254 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 RPL26L1Q9UNX3 145 aaKnown RBP7.62□□□□□ -1.19
CCDC93-207ENST00000474006 PPIL1Q9Y3C6 166 aa7.62□□□□□ -1.19
CCDC93-207ENST00000474006 HELZP42694 1942 aaKnown RBP7.62□□□□□ -1.19
CCDC93-207ENST00000474006 COL4A3Q01955 1670 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 A0A1W2PQ67 120 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 TCRBV21S2A2A0A5A6 115 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 TSPAN11A1L157 253 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 SDR42E2A6NKP2 422 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 A8MX80 341 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 C1QTNF3-AMACRE9PGA6 284 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 AP3B1O00203 1094 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 CTIFO43310 598 aaKnown RBP7.61□□□□□ -1.19
CCDC93-207ENST00000474006 DNTTP04053 509 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 PIRTP0C851 137 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 MLNP12872 115 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 GABRG2P18507 467 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 AOC1P19801 751 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 HLA-DPA1P20036 260 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 ITGB7P26010 798 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 CXCL12P48061 93 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 CLCN5P51795 746 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 SESN2P58004 480 aaPredicted RBP7.61□□□□□ -1.19
CCDC93-207ENST00000474006 ZBTB16Q05516 673 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 CNTN1Q12860 1018 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 MSLNQ13421 630 aaPredicted RBP7.61□□□□□ -1.19
CCDC93-207ENST00000474006 HLTFQ14527 1009 aaKnown RBP eCLIP7.61□□□□□ -1.19
CCDC93-207ENST00000474006 UGP2Q16851 508 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.61□□□□□ -1.19
CCDC93-207ENST00000474006 HP1BP3Q5SSJ5 553 aaPredicted RBP7.61□□□□□ -1.19
CCDC93-207ENST00000474006 DENND2CQ68D51 928 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 CWF19L1Q69YN2 538 aaKnown RBP7.61□□□□□ -1.19
CCDC93-207ENST00000474006 FBXL19Q6PCT2 694 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 ZNF534Q76KX8 674 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 ERN2Q76MJ5 926 aaKnown RBP7.61□□□□□ -1.19
CCDC93-207ENST00000474006 PDIK1LQ8N165 341 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 NDUFAF2Q8N183 169 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 ZCCHC9Q8N567 271 aaKnown RBP7.61□□□□□ -1.19
CCDC93-207ENST00000474006 AADATQ8N5Z0 425 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 TSTD1Q8NFU3 115 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 OR13H1Q8NG92 308 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 BRSK1Q8TDC3 778 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 GANCQ8TET4 914 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 HMGB4Q8WW32 186 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 SCRN2Q96FV2 425 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 CRELD1Q96HD1 420 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 PPP1R16AQ96I34 528 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 SERPINB12Q96P63 405 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 OMDQ99983 421 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 FRMD8Q9BZ67 464 aaPredicted RBP7.61□□□□□ -1.19
CCDC93-207ENST00000474006 NEUROG2Q9H2A3 272 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 PABPC3Q9H361 631 aaKnown RBP7.61□□□□□ -1.19
CCDC93-207ENST00000474006 EPHX3Q9H6B9 360 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 MAGEE1Q9HCI5 957 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 XAB2Q9HCS7 855 aaKnown RBP7.61□□□□□ -1.19
CCDC93-207ENST00000474006 DYRK4Q9NR20 520 aa7.61□□□□□ -1.19
CCDC93-207ENST00000474006 FBXL12Q9NXK8 326 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms