RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 FAM90A13PP0C7W8 464 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 FAM90A24PP0C7X0 464 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 CBSLP0DN79 551 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 SELLP14151 372 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 HOXC9P31274 260 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 SHMT1P34896 483 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 CBSP35520 551 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 ARSEP51690 589 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 CDH12P55289 794 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 CFHR1Q03591 330 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 GAD2Q05329 585 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 FAM27E3Q08E93 113 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 CAPSQ13938 189 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 NEDD9Q14511 834 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 MIDNQ504T8 468 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 PMS2CLQ68D20 193 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 METTL2BQ6P1Q9 378 aaKnown RBP4.34□□□□□ -1.71
BRCA1-212ENST00000473961 FBXO42Q6P3S6 717 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 TRILQ7L0X0 811 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 TRIM74Q86UV6 250 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 TRIM73Q86UV7 250 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 KBTBD6Q86V97 674 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 WDR63Q8IWG1 891 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 RBFAQ8N0V3 343 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 GALNT16Q8N428 558 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 ZBTB2Q8N680 514 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 IL17RCQ8NAC3 791 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 TMEM163Q8TC26 289 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 SLC35F5Q8WV83 523 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 ZNF622Q969S3 477 aaKnown RBP eCLIP4.34□□□□□ -1.71
BRCA1-212ENST00000473961 ZG16BQ96DA0 208 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 PGAP3Q96FM1 320 aaPredicted RBP4.34□□□□□ -1.71
BRCA1-212ENST00000473961 METTL2AQ96IZ6 378 aaKnown RBP4.34□□□□□ -1.71
BRCA1-212ENST00000473961 SLC41A2Q96JW4 573 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 GBP5Q96PP8 586 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 PCGF1Q9BSM1 259 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 NDST4Q9H3R1 872 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 AAMDCQ9H7C9 122 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 MVB12BQ9H7P6 319 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 SLC28A3Q9HAS3 691 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 SPAG4Q9NPE6 437 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 THSD1Q9NS62 852 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 SETD4Q9NVD3 440 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 KLHL13Q9P2N7 655 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 PLEKHB1Q9UF11 243 aaPredicted RBP4.34□□□□□ -1.71
BRCA1-212ENST00000473961 AMACRQ9UHK6 382 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 ANAPC5Q9UJX4 755 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 BTBD3Q9Y2F9 522 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 R3HDM2Q9Y2K5 976 aaKnown RBP4.34□□□□□ -1.71
BRCA1-212ENST00000473961 PAM16Q9Y3D7 125 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 CCL27Q9Y4X3 112 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 TRPV2Q9Y5S1 764 aa4.34□□□□□ -1.71
BRCA1-212ENST00000473961 TCRBV21S2A2A0A5A6 115 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 KANSL1LA0AUZ9 987 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 TMEM202A6NGA9 273 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 A8MXE2 369 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 OGG1O15527 345 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 KLKB1P03952 638 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 TNFSF8P32971 234 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 AVPR1AP37288 418 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 TAS2R40P59535 323 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 KRT83P78385 493 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 ST3GAL1Q11201 340 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 TFCP2Q12800 502 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 SNTB1Q13884 538 aaKnown RBP4.33□□□□□ -1.72
BRCA1-212ENST00000473961 LPIN1Q14693 890 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 COG2Q14746 738 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 RARS2Q5T160 578 aaKnown RBP4.33□□□□□ -1.72
BRCA1-212ENST00000473961 GGNBP1Q5YKI7 109 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 DEF8Q6ZN54 512 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 CFAP77Q6ZQR2 320 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 TRAPPC11Q7Z392 1133 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 GALNTL5Q7Z4T8 443 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 GALNT13Q8IUC8 556 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 LINC00346Q8IVM7 164 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 CCDC13Q8IYE1 715 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 THNSL1Q8IYQ7 743 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 DUSP19Q8WTR2 217 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 LRRC59Q96AG4 307 aaKnown RBP4.33□□□□□ -1.72
BRCA1-212ENST00000473961 TMEM18Q96B42 140 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 DGAT2Q96PD7 388 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 SPAG5Q96R06 1193 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 GFM1Q96RP9 751 aaKnown RBP4.33□□□□□ -1.72
BRCA1-212ENST00000473961 ABHD1Q96SE0 405 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 SRSF8Q9BRL6 282 aaKnown RBP4.33□□□□□ -1.72
BRCA1-212ENST00000473961 MMTAG2Q9BU76 263 aaKnown RBP4.33□□□□□ -1.72
BRCA1-212ENST00000473961 CCDC106Q9BWC9 280 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 C1QTNF5Q9BXJ0 243 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 LHPPQ9H008 270 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 ALDH8A1Q9H2A2 487 aaPredicted RBP4.33□□□□□ -1.72
BRCA1-212ENST00000473961 LTB4R2Q9NPC1 389 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 CYSLTR2Q9NS75 346 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 ANAPC2Q9UJX6 822 aa4.33□□□□□ -1.72
BRCA1-212ENST00000473961 SRPRBQ9Y5M8 271 aaKnown RBP4.33□□□□□ -1.72
BRCA1-212ENST00000473961 TRBV5-3A0A0A0MS03 114 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 TRBC2A0A5B9 178 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 CHL1O00533 1208 aa4.32□□□□□ -1.72
BRCA1-212ENST00000473961 WDR46O15213 610 aaKnown RBP4.32□□□□□ -1.72
BRCA1-212ENST00000473961 ZC3H11AO75152 810 aaKnown RBP eCLIP4.32□□□□□ -1.72
BRCA1-212ENST00000473961 TBX10O75333 385 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms