RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 PABPC1P11940 636 aaKnown RBP18.01■□□□□ 0.47
VARS2-206ENST00000473916 LPOP22079 712 aaPredicted RBP18.01■□□□□ 0.47
VARS2-206ENST00000473916 STC1P52823 247 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 SLC12A2P55011 1212 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 CSHL1Q14406 222 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 LACTB2Q53H82 288 aaPredicted RBP18.01■□□□□ 0.47
VARS2-206ENST00000473916 ARMC12Q5T9G4 340 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 PSAPL1Q6NUJ1 521 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 GALNT7Q86SF2 657 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 ADIPOR2Q86V24 386 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 PIANPQ8IYJ0 282 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 RAB3IL1Q8TBN0 382 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 ASIC4Q96FT7 647 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 SORT1Q99523 831 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 VWA7Q9Y334 891 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 ZNF711Q9Y462 761 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 A8MX80 341 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 CRABP2P29373 138 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 CCR10P46092 362 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 SCTRP47872 440 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 SLC1A6P48664 564 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 POLD2P49005 469 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 BCL2L1Q07817 233 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 DUSP6Q16828 381 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 PDE12Q6L8Q7 609 aaKnown RBP18.01■□□□□ 0.47
VARS2-206ENST00000473916 MRNIPQ6NTE8 343 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 C22orf39Q6P5X5 142 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 OR2AP1Q8NGE2 309 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 ERP27Q96DN0 273 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 SGF29Q96ES7 293 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 PRR11Q96HE9 360 aaPredicted RBP18.01■□□□□ 0.47
VARS2-206ENST00000473916 HS3ST2Q9Y278 367 aa18.01■□□□□ 0.47
VARS2-206ENST00000473916 TARM1B6A8C7 271 aa18■□□□□ 0.47
VARS2-206ENST00000473916 ZNF197O14709 1029 aa18■□□□□ 0.47
VARS2-206ENST00000473916 HTRA2O43464 458 aaPredicted RBP18■□□□□ 0.47
VARS2-206ENST00000473916 KLHL2O95198 593 aa18■□□□□ 0.47
VARS2-206ENST00000473916 IGSF6O95976 241 aa18■□□□□ 0.47
VARS2-206ENST00000473916 SERPINE1P05121 402 aa18■□□□□ 0.47
VARS2-206ENST00000473916 PEX6Q13608 980 aa18■□□□□ 0.47
VARS2-206ENST00000473916 TYSND1Q2T9J0 566 aa18■□□□□ 0.47
VARS2-206ENST00000473916 GALNTL6Q49A17 601 aa18■□□□□ 0.47
VARS2-206ENST00000473916 ACCSLQ4AC99 568 aa18■□□□□ 0.47
VARS2-206ENST00000473916 AFTPHQ6ULP2 937 aa18■□□□□ 0.47
VARS2-206ENST00000473916 CNPY4Q8N129 248 aa18■□□□□ 0.47
VARS2-206ENST00000473916 OR6Y1Q8NGX8 325 aa18■□□□□ 0.47
VARS2-206ENST00000473916 ZFYVE19Q96K21 471 aa18■□□□□ 0.47
VARS2-206ENST00000473916 SAMD11Q96NU1 681 aa18■□□□□ 0.47
VARS2-206ENST00000473916 ZMYND15Q9H091 742 aa18■□□□□ 0.47
VARS2-206ENST00000473916 THAP1Q9NVV9 213 aa18■□□□□ 0.47
VARS2-206ENST00000473916 SLC12A4Q9UP95 1085 aa18■□□□□ 0.47
VARS2-206ENST00000473916 STX7O15400 261 aaKnown RBP17.99■□□□□ 0.47
VARS2-206ENST00000473916 TGDSO95455 350 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 MYL2P10916 166 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 PSMA3P25788 255 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 PMLP29590 882 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 MC4RP32245 332 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 GRIA4P48058 902 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 DBN1Q16643 649 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 GEN1Q17RS7 908 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 RALGPS1Q5JS13 557 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 Q6ZVU0 165 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 GABPB2Q8TAK5 448 aaPredicted RBP17.99■□□□□ 0.47
VARS2-206ENST00000473916 CYB5D2Q8WUJ1 264 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 IGFLR1Q9H665 355 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 GPAMQ9HCL2 828 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 TBC1D14Q9P2M4 693 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 HECAQ9UBI9 543 aaPredicted RBP17.99■□□□□ 0.47
VARS2-206ENST00000473916 ZNF106Q9H2Y7 1883 aaKnown RBP17.99■□□□□ 0.47
VARS2-206ENST00000473916 UBA6A0AVT1 1052 aaPredicted RBP17.99■□□□□ 0.47
VARS2-206ENST00000473916 OR1I1O60431 355 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 WISP3O95389 354 aaPredicted RBP17.99■□□□□ 0.47
VARS2-206ENST00000473916 CCDC166P0CW27 439 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 OGNP20774 298 aaKnown RBP17.99■□□□□ 0.47
VARS2-206ENST00000473916 CA5AP35218 305 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 ARFIP2P53365 341 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 MESP2Q0VG99 397 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 PPP2R2DQ66LE6 453 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 ZYG11AQ6WRX3 759 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 MTDHQ86UE4 582 aaKnown RBP17.99■□□□□ 0.47
VARS2-206ENST00000473916 C12orf40Q86WS4 652 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 LMNTD2Q8IXW0 634 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 PAF1Q8N7H5 531 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 CCDC97Q96F63 343 aaPredicted RBP17.99■□□□□ 0.47
VARS2-206ENST00000473916 TSNARE1Q96NA8 513 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 PLCD4Q9BRC7 762 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 PNPOQ9NVS9 261 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 IL17CQ9P0M4 197 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 DNAJC16Q9Y2G8 782 aa17.99■□□□□ 0.47
VARS2-206ENST00000473916 A0A087X1B8 175 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 NEMP2A6NFY4 417 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 CYP17A1P05093 508 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 COL6A2P12110 1019 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 FDXRP22570 491 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 CSNK1DP48730 415 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 ECT2LQ008S8 904 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 ACTN3Q08043 901 aaPredicted RBP17.98■□□□□ 0.47
VARS2-206ENST00000473916 KCNC3Q14003 757 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 DHCR24Q15392 516 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 LRRC73Q5JTD7 316 aa17.98■□□□□ 0.47
VARS2-206ENST00000473916 FAM78AQ5JUQ0 283 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms