RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 SNX13Q9Y5W8 968 aa10.97□□□□□ -0.65
C9orf3-214ENST00000473778 HEATR9A2RTY3 570 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 H3BMM5 538 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 H3BSA7 217 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 M0QZQ0 153 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 MRASO14807 208 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 LDB2O43679 373 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 NRP2O60462 931 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 TIPRLO75663 272 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 SNRPB2P08579 225 aaKnown RBP10.96□□□□□ -0.65
C9orf3-214ENST00000473778 UGT1A6P19224 532 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 IMPDH1P20839 514 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 ATP6V1B2P21281 511 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 CD52P31358 61 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 SLC5A2P31639 672 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 GRIK1P39086 918 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 SLC7A2P52569 658 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 USP46P62068 366 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 ITKQ08881 620 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 STX5Q13190 355 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 CYTH1Q15438 398 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 SIRPB2Q5JXA9 342 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 OVOS1Q6IE37 1185 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 TAF2Q6P1X5 1199 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 CATSPER1Q8NEC5 780 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 OR6P1Q8NGX9 317 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 CANT1Q8WVQ1 401 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 PABPC5Q96DU9 382 aaKnown RBP10.96□□□□□ -0.65
C9orf3-214ENST00000473778 MYEOVQ96EZ4 313 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 KCNA7Q96RP8 456 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 MRPS26Q9BYN8 205 aaKnown RBP10.96□□□□□ -0.65
C9orf3-214ENST00000473778 PRKD2Q9BZL6 878 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 Q9H521 79 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 VPS45Q9NRW7 570 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 TBC1D13Q9NVG8 400 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 DUS2Q9NX74 493 aaKnown RBP10.96□□□□□ -0.65
C9orf3-214ENST00000473778 MAP10Q9P2G4 905 aa10.96□□□□□ -0.65
C9orf3-214ENST00000473778 CNOT6Q9ULM6 557 aaKnown RBP10.96□□□□□ -0.65
C9orf3-214ENST00000473778 ZNF839A8K0R7 811 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 NME4O00746 187 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 SOCS2O14508 198 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 MUSKO15146 869 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 TMCC1O94876 653 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 TBX18O95935 607 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 SLC4A1P02730 911 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 ASLP04424 464 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 ATXN1LP0C7T5 689 aaKnown RBP10.96□□□□□ -0.66
C9orf3-214ENST00000473778 MTHFD2P13995 350 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 GPX3P22352 226 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 RGS2P41220 211 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 CLCN5P51795 746 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 GRB7Q14451 532 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 OR4D1Q15615 310 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 PSMD5Q16401 504 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 SPRYD7Q5W111 196 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 TIGD7Q6NT04 549 aaPredicted RBP10.96□□□□□ -0.66
C9orf3-214ENST00000473778 BEND5Q7L4P6 421 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 CARM1Q86X55 608 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 CIR1Q86X95 450 aaPredicted RBP10.96□□□□□ -0.66
C9orf3-214ENST00000473778 NUP93Q8N1F7 819 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 TRPV1Q8NER1 839 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 ARRDC2Q8TBH0 407 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 C19orf60Q96EN9 201 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 RPL10LQ96L21 214 aaKnown RBP10.96□□□□□ -0.66
C9orf3-214ENST00000473778 TBATAQ96M53 351 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 AP5M1Q9H0R1 490 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 TUBB1Q9H4B7 451 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 AKTIPQ9H8T0 292 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 IL1RL2Q9HB29 575 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 OLAHQ9NV23 265 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 CNOT11Q9UKZ1 510 aaKnown RBP10.96□□□□□ -0.66
C9orf3-214ENST00000473778 DSEQ9UL01 958 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 PADI3Q9ULW8 664 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 ARL5AQ9Y689 179 aa10.96□□□□□ -0.66
C9orf3-214ENST00000473778 ZFC3H1O60293 1989 aaKnown RBP10.96□□□□□ -0.66
C9orf3-214ENST00000473778 DLGAP1O14490 977 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 CDK14O94921 469 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 PIRTP0C851 137 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 PSMC3P17980 439 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 CAPN3P20807 821 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 APLP1P51693 650 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 SH3BGRP55822 239 aaPredicted RBP10.95□□□□□ -0.66
C9orf3-214ENST00000473778 TXNL4AP83876 142 aaKnown RBP10.95□□□□□ -0.66
C9orf3-214ENST00000473778 MGAT3Q09327 533 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 GALNT1Q10472 559 aaPredicted RBP10.95□□□□□ -0.66
C9orf3-214ENST00000473778 MS4A13Q5J8X5 152 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 MRPL10Q7Z7H8 261 aaKnown RBP10.95□□□□□ -0.66
C9orf3-214ENST00000473778 PHYKPLQ8IUZ5 450 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 RNF168Q8IYW5 571 aaPredicted RBP10.95□□□□□ -0.66
C9orf3-214ENST00000473778 TTC9BQ8N6N2 239 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 GPR152Q8TDT2 470 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 IGSF8Q969P0 613 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 L3HYPDHQ96EM0 354 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 SLC39A13Q96H72 371 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 UHRF1Q96T88 793 aaPredicted RBP10.95□□□□□ -0.66
C9orf3-214ENST00000473778 KATNAL1Q9BW62 490 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 EML4Q9HC35 981 aaKnown RBP10.95□□□□□ -0.66
C9orf3-214ENST00000473778 PRDM5Q9NQX1 630 aaPredicted RBP10.95□□□□□ -0.66
C9orf3-214ENST00000473778 PTTG2Q9NZH5 202 aa10.95□□□□□ -0.66
C9orf3-214ENST00000473778 UXTQ9UBK9 157 aaPredicted RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms