RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 BRAT1Q6PJG6 821 aa12.63□□□□□ -0.39
TRAF4-209ENST00000473421 SLC30A9Q6PML9 568 aa12.63□□□□□ -0.39
TRAF4-209ENST00000473421 SRLQ86TD4 932 aa12.63□□□□□ -0.39
TRAF4-209ENST00000473421 IL22RA1Q8N6P7 574 aa12.63□□□□□ -0.39
TRAF4-209ENST00000473421 BMPERQ8N8U9 685 aa12.63□□□□□ -0.39
TRAF4-209ENST00000473421 COQ10AQ96MF6 247 aa12.63□□□□□ -0.39
TRAF4-209ENST00000473421 ZNF641Q96N77 438 aaPredicted RBP12.63□□□□□ -0.39
TRAF4-209ENST00000473421 SMIM14Q96QK8 99 aa12.63□□□□□ -0.39
TRAF4-209ENST00000473421 CTRCQ99895 268 aa12.63□□□□□ -0.39
TRAF4-209ENST00000473421 STK33Q9BYT3 514 aa12.63□□□□□ -0.39
TRAF4-209ENST00000473421 ADNPQ9H2P0 1102 aa12.63□□□□□ -0.39
TRAF4-209ENST00000473421 SAMSN1Q9NSI8 373 aaKnown RBP12.63□□□□□ -0.39
TRAF4-209ENST00000473421 GTF3C3Q9Y5Q9 886 aa12.63□□□□□ -0.39
TRAF4-209ENST00000473421 ICE1Q9Y2F5 2266 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 IGHV1OR21-1A0A087WYE8 117 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 RHPN2P1A8MT19 583 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 RAD1O60671 282 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 EML2O95834 649 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 HOXC4P09017 264 aaPredicted RBP12.62□□□□□ -0.39
TRAF4-209ENST00000473421 ELFN1P0C7U0 828 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 KRT3P12035 628 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 GPD1P21695 349 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 CD82P27701 267 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 OAS2P29728 719 aaKnown RBP12.62□□□□□ -0.39
TRAF4-209ENST00000473421 GNPDA1P46926 289 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 CTBSQ01459 385 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 ACOX1Q15067 660 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 PARP15Q460N3 678 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 TMEM164Q5U3C3 297 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 DPPA4Q7L190 304 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 HEATR4Q86WZ0 1026 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 ARHGAP12Q8IWW6 846 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 CACNA2D3Q8IZS8 1091 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 ATL2Q8NHH9 583 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 FNIP1Q8TF40 1166 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 FRMD8Q9BZ67 464 aaPredicted RBP12.62□□□□□ -0.39
TRAF4-209ENST00000473421 B3GNT4Q9C0J1 378 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 WDR26Q9H7D7 661 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 TMEM51Q9NW97 253 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 SLC39A1Q9NY26 324 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 B4GALT6Q9UBX8 382 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 PILRAQ9UKJ1 303 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 SUFUQ9UMX1 484 aa12.62□□□□□ -0.39
TRAF4-209ENST00000473421 PCYT1BQ9Y5K3 369 aaPredicted RBP12.62□□□□□ -0.39
TRAF4-209ENST00000473421 BLACEA4D250 179 aa12.61□□□□□ -0.39
TRAF4-209ENST00000473421 EFCAB7A8K855 629 aa12.61□□□□□ -0.39
TRAF4-209ENST00000473421 HGSO14964 777 aaPredicted RBP12.61□□□□□ -0.39
TRAF4-209ENST00000473421 THRAP10827 490 aa12.61□□□□□ -0.39
TRAF4-209ENST00000473421 STAT1P42224 750 aa12.61□□□□□ -0.39
TRAF4-209ENST00000473421 CCR10P46092 362 aa12.61□□□□□ -0.39
TRAF4-209ENST00000473421 ATP1A2P50993 1020 aa12.61□□□□□ -0.39
TRAF4-209ENST00000473421 CNGA3Q16281 694 aa12.61□□□□□ -0.39
TRAF4-209ENST00000473421 DPCR1Q3MIW9 517 aa12.61□□□□□ -0.39
TRAF4-209ENST00000473421 CFAP58Q5T655 872 aa12.61□□□□□ -0.39
TRAF4-209ENST00000473421 DENND2CQ68D51 928 aa12.61□□□□□ -0.39
TRAF4-209ENST00000473421 SMYD5Q6GMV2 418 aa12.61□□□□□ -0.39
TRAF4-209ENST00000473421 HSD11B1LQ7Z5J1 315 aa12.61□□□□□ -0.39
TRAF4-209ENST00000473421 CBARPQ8N350 705 aaPredicted RBP12.61□□□□□ -0.39
TRAF4-209ENST00000473421 ARFGAP1Q8N6T3 406 aa12.61□□□□□ -0.39
TRAF4-209ENST00000473421 NPWQ8N729 165 aa12.61□□□□□ -0.39
TRAF4-209ENST00000473421 ABHD17AQ96GS6 310 aa12.61□□□□□ -0.39
TRAF4-209ENST00000473421 TUBGCP5Q96RT8 1024 aa12.61□□□□□ -0.39
TRAF4-209ENST00000473421 TEX101Q9BY14 249 aa12.61□□□□□ -0.39
TRAF4-209ENST00000473421 CDH19Q9H159 772 aa12.61□□□□□ -0.39
TRAF4-209ENST00000473421 APMAPQ9HDC9 416 aa12.61□□□□□ -0.39
TRAF4-209ENST00000473421 SEPT3Q9UH03 358 aa12.61□□□□□ -0.39
TRAF4-209ENST00000473421 MRPS18BQ9Y676 258 aaKnown RBP12.61□□□□□ -0.39
TRAF4-209ENST00000473421 SPTAN1Q13813 2472 aaKnown RBP12.61□□□□□ -0.39
TRAF4-209ENST00000473421 NOTCH2Q04721 2471 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 CFAP69A5D8W1 941 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 A8MU76 341 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 PES1O00541 588 aaKnown RBP12.6□□□□□ -0.39
TRAF4-209ENST00000473421 MTSS1O43312 755 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 PALMO75781 387 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 SOD1P00441 154 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 MYCLP1P12525 358 aaPredicted RBP12.6□□□□□ -0.39
TRAF4-209ENST00000473421 LHCGRP22888 699 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 F8A1P23610 371 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 ADCY8P40145 1251 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 ETV3P41162 512 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 JAM2P57087 298 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 DEFB109BQ30KR1 87 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 TRIM74Q86UV6 250 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 FAM129CQ86XR2 697 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 PGBD5Q8N414 524 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 MSANTD4Q8NCY6 345 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 AGBL5Q8NDL9 886 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 OR4D9Q8NGE8 314 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 KIAA1524Q8TCG1 905 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 RTP4Q96DX8 246 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 SLC45A3Q96JT2 553 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 PEBP4Q96S96 227 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 DDA1Q9BW61 102 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 VPS16Q9H269 839 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 ATP13A3Q9H7F0 1226 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 NLRC4Q9NPP4 1024 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 TAB2Q9NYJ8 693 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 ADAM22Q9P0K1 906 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 TMEM98Q9Y2Y6 226 aa12.6□□□□□ -0.39
TRAF4-209ENST00000473421 PCDHGC4Q9Y5F7 938 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms