RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 FAM110CQ1W6H9 321 aa21.14■□□□□ 0.98
COL18A1-207ENST00000473212 KDELC1Q6UW63 502 aa21.14■□□□□ 0.98
COL18A1-207ENST00000473212 KIAA0408Q6ZU52 694 aa21.14■□□□□ 0.98
COL18A1-207ENST00000473212 OR52K2Q8NGK3 314 aa21.14■□□□□ 0.98
COL18A1-207ENST00000473212 OR6P1Q8NGX9 317 aa21.14■□□□□ 0.98
COL18A1-207ENST00000473212 TFAP2CQ92754 450 aa21.14■□□□□ 0.98
COL18A1-207ENST00000473212 UBXN10Q96LJ8 280 aa21.14■□□□□ 0.98
COL18A1-207ENST00000473212 PKMYT1Q99640 499 aa21.14■□□□□ 0.98
COL18A1-207ENST00000473212 PRKD2Q9BZL6 878 aa21.14■□□□□ 0.98
COL18A1-207ENST00000473212 ANKRD12Q6UB98 2062 aa21.14■□□□□ 0.98
COL18A1-207ENST00000473212 FAM155AB1AL88 458 aaPredicted RBP21.14■□□□□ 0.97
COL18A1-207ENST00000473212 CNTN5O94779 1100 aa21.14■□□□□ 0.97
COL18A1-207ENST00000473212 PEX11BO96011 259 aa21.14■□□□□ 0.97
COL18A1-207ENST00000473212 GNAO1P09471 354 aa21.14■□□□□ 0.97
COL18A1-207ENST00000473212 BMP2P12643 396 aa21.14■□□□□ 0.97
COL18A1-207ENST00000473212 IMPDH1P20839 514 aa21.14■□□□□ 0.97
COL18A1-207ENST00000473212 LEPRP48357 1165 aaKnown RBP21.14■□□□□ 0.97
COL18A1-207ENST00000473212 CLCN5P51795 746 aa21.14■□□□□ 0.97
COL18A1-207ENST00000473212 STX1BP61266 288 aa21.14■□□□□ 0.97
COL18A1-207ENST00000473212 MRPS6P82932 125 aaKnown RBP21.14■□□□□ 0.97
COL18A1-207ENST00000473212 PURAQ00577 322 aaKnown RBP21.14■□□□□ 0.97
COL18A1-207ENST00000473212 KIF19Q2TAC6 998 aa21.14■□□□□ 0.97
COL18A1-207ENST00000473212 HACD2Q6Y1H2 254 aa21.14■□□□□ 0.97
COL18A1-207ENST00000473212 ERMP1Q7Z2K6 904 aa21.14■□□□□ 0.97
COL18A1-207ENST00000473212 SLC22A9Q8IVM8 553 aa21.14■□□□□ 0.97
COL18A1-207ENST00000473212 RYBPQ8N488 228 aaPredicted RBP21.14■□□□□ 0.97
COL18A1-207ENST00000473212 PTERQ96BW5 349 aa21.14■□□□□ 0.97
COL18A1-207ENST00000473212 PABPC5Q96DU9 382 aaKnown RBP21.14■□□□□ 0.97
COL18A1-207ENST00000473212 C19orf60Q96EN9 201 aa21.14■□□□□ 0.97
COL18A1-207ENST00000473212 TCF12Q99081 682 aa21.14■□□□□ 0.97
COL18A1-207ENST00000473212 SLC8A2Q9UPR5 921 aa21.14■□□□□ 0.97
COL18A1-207ENST00000473212 FAM149AA5PLN7 773 aa21.13■□□□□ 0.97
COL18A1-207ENST00000473212 NR5A2O00482 541 aa21.13■□□□□ 0.97
COL18A1-207ENST00000473212 SIX3O95343 332 aaPredicted RBP21.13■□□□□ 0.97
COL18A1-207ENST00000473212 GPX3P22352 226 aa21.13■□□□□ 0.97
COL18A1-207ENST00000473212 CCR1P32246 355 aa21.13■□□□□ 0.97
COL18A1-207ENST00000473212 GPR15P49685 360 aa21.13■□□□□ 0.97
COL18A1-207ENST00000473212 PIK3R6Q5UE93 754 aa21.13■□□□□ 0.97
COL18A1-207ENST00000473212 CBR4Q8N4T8 237 aa21.13■□□□□ 0.97
COL18A1-207ENST00000473212 HM13Q8TCT9 377 aa21.13■□□□□ 0.97
COL18A1-207ENST00000473212 ARMC1Q9NVT9 282 aa21.13■□□□□ 0.97
COL18A1-207ENST00000473212 CLEC11AQ9Y240 323 aa21.13■□□□□ 0.97
COL18A1-207ENST00000473212 A0A1W2PQH9 124 aa21.13■□□□□ 0.97
COL18A1-207ENST00000473212 NME4O00746 187 aa21.13■□□□□ 0.97
COL18A1-207ENST00000473212 TUBA4AP68366 448 aa21.13■□□□□ 0.97
COL18A1-207ENST00000473212 GALNT1Q10472 559 aaPredicted RBP21.13■□□□□ 0.97
COL18A1-207ENST00000473212 TMED1Q13445 227 aa21.13■□□□□ 0.97
COL18A1-207ENST00000473212 FSCN1Q16658 493 aaKnown RBP21.13■□□□□ 0.97
COL18A1-207ENST00000473212 ZNF678Q5SXM1 525 aa21.13■□□□□ 0.97
COL18A1-207ENST00000473212 ANKRD23Q86SG2 305 aa21.13■□□□□ 0.97
COL18A1-207ENST00000473212 ZC3H15Q8WU90 426 aaKnown RBP21.13■□□□□ 0.97
COL18A1-207ENST00000473212 HDAC10Q969S8 669 aa21.13■□□□□ 0.97
COL18A1-207ENST00000473212 HMCESQ96FZ2 354 aa21.13■□□□□ 0.97
COL18A1-207ENST00000473212 AKTIPQ9H8T0 292 aa21.13■□□□□ 0.97
COL18A1-207ENST00000473212 EGFL7Q9UHF1 273 aa21.13■□□□□ 0.97
COL18A1-207ENST00000473212 DSEQ9UL01 958 aa21.13■□□□□ 0.97
COL18A1-207ENST00000473212 VWA7Q9Y334 891 aa21.13■□□□□ 0.97
COL18A1-207ENST00000473212 A0A0J9YYE9 177 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 PIRTP0C851 137 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 PRSS56P0CW18 603 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 ETFBP38117 255 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 GRIK1P39086 918 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 ACADVLP49748 655 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 FOXA1P55317 472 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 ALFQ53S48 1182 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 TBCELQ5QJ74 424 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 GDF6Q6KF10 455 aaPredicted RBP21.12■□□□□ 0.97
COL18A1-207ENST00000473212 CXCL17Q6UXB2 119 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 SPPL2CQ8IUH8 684 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 PCYOX1LQ8NBM8 494 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 GPR152Q8TDT2 470 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 ABTB1Q969K4 478 aaPredicted RBP21.12■□□□□ 0.97
COL18A1-207ENST00000473212 TSPAN17Q96FV3 270 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 DNAAF2Q9NVR5 837 aaKnown RBP21.12■□□□□ 0.97
COL18A1-207ENST00000473212 MAP10Q9P2G4 905 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 TPST1O60507 370 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 BMP10O95393 424 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 ODC1P11926 461 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 CHRM3P20309 590 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 HOXC13P31276 330 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 CPT1AP50416 773 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 VPS26BQ4G0F5 336 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 UNC50Q53HI1 259 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 CIR1Q86X95 450 aaPredicted RBP21.12■□□□□ 0.97
COL18A1-207ENST00000473212 SCN4BQ8IWT1 228 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 ZNF786Q8N393 782 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 CALML6Q8TD86 181 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 ROPN1LQ96C74 230 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 RPL10LQ96L21 214 aaKnown RBP21.12■□□□□ 0.97
COL18A1-207ENST00000473212 KCNA7Q96RP8 456 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 ACBD6Q9BR61 282 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 CATSPERBQ9H7T0 1116 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 SMOXQ9NWM0 555 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 GMEB1Q9Y692 573 aa21.12■□□□□ 0.97
COL18A1-207ENST00000473212 A0A1B0GTL3 188 aa21.11■□□□□ 0.97
COL18A1-207ENST00000473212 DLGAP1O14490 977 aa21.11■□□□□ 0.97
COL18A1-207ENST00000473212 MMP2P08253 660 aa21.11■□□□□ 0.97
COL18A1-207ENST00000473212 SOX11P35716 441 aa21.11■□□□□ 0.97
COL18A1-207ENST00000473212 SCNN1BP51168 640 aa21.11■□□□□ 0.97
COL18A1-207ENST00000473212 ZNF354CQ86Y25 554 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms