RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 ALG3Q92685 438 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 TSACCQ96A04 125 aaPredicted RBP9.16□□□□□ -0.94
SYN3-211ENST00000472027 FUBP1Q96AE4 644 aaKnown RBP9.16□□□□□ -0.94
SYN3-211ENST00000472027 TADA1Q96BN2 335 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 NUS1Q96E22 293 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 DTD2Q96FN9 168 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 IMP4Q96G21 291 aaKnown RBP9.16□□□□□ -0.94
SYN3-211ENST00000472027 MLPHQ9BV36 600 aaPredicted RBP9.16□□□□□ -0.94
SYN3-211ENST00000472027 OSBPL8Q9BZF1 889 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 SLC25A51Q9H1U9 297 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 GLOD4Q9HC38 313 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 KCTD5Q9NXV2 234 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 SPASTQ9UBP0 616 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 PACSIN2Q9UNF0 486 aaPredicted RBP9.16□□□□□ -0.94
SYN3-211ENST00000472027 RPL26L1Q9UNX3 145 aaKnown RBP9.16□□□□□ -0.94
SYN3-211ENST00000472027 CSNK1G3Q9Y6M4 447 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 CACNA1EQ15878 2313 aa9.16□□□□□ -0.94
SYN3-211ENST00000472027 CEP250Q9BV73 2442 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 FAM221BA6H8Z2 402 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 TMEM202A6NGA9 273 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 MIF4GDA9UHW6 222 aaKnown RBP9.15□□□□□ -0.94
SYN3-211ENST00000472027 HACD1B0YJ81 288 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 H7C0C1 242 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 K7ESM1 405 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 CACNB4O00305 520 aaPredicted RBP9.15□□□□□ -0.94
SYN3-211ENST00000472027 DDX3YO15523 660 aaKnown RBP9.15□□□□□ -0.94
SYN3-211ENST00000472027 MTSS1O43312 755 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 AQP9O43315 295 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 KRT86O43790 486 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 TJP3O95049 919 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 CLDN7O95471 211 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 FTCDO95954 541 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 MT-CYBP00156 380 aaPredicted RBP9.15□□□□□ -0.94
SYN3-211ENST00000472027 TNFP01375 233 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 HOXC4P09017 264 aaPredicted RBP9.15□□□□□ -0.94
SYN3-211ENST00000472027 C1SP09871 688 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 ALPPL2P10696 532 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 ZNF30P17039 623 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 RBL1P28749 1068 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 CD68P34810 354 aaPredicted RBP9.15□□□□□ -0.94
SYN3-211ENST00000472027 PTPN7P35236 360 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 ATP5OP48047 213 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 ACADVLP49748 655 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 BLKP51451 505 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 HK3P52790 923 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 SRP54P61011 504 aaKnown RBP9.15□□□□□ -0.94
SYN3-211ENST00000472027 OTUD4Q01804 1114 aaKnown RBP9.15□□□□□ -0.94
SYN3-211ENST00000472027 XRCC4Q13426 336 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 GALNT3Q14435 633 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 NOMO1Q15155 1222 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 PCSK7Q16549 785 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 CDKN3Q16667 212 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 ALG11Q2TAA5 492 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 PROX2Q3B8N5 592 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 PRRT3Q5FWE3 981 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 CCDC181Q5TID7 509 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 NYAP1Q6ZVC0 841 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 RD3Q7Z3Z2 195 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 HID1Q8IV36 788 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 ZNF567Q8N184 647 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 UBL4BQ8N7F7 174 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 CCDC112Q8NEF3 446 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 ATL2Q8NHH9 583 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 TBATAQ96M53 351 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 WDR92Q96MX6 357 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 CNTNAP3BQ96NU0 1288 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 TRIB3Q96RU7 358 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 LYSMD1Q96S90 227 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 VAT1Q99536 393 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 DUSP23Q9BVJ7 150 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 LGR4Q9BXB1 951 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 ADGRE3Q9BY15 652 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 CNTNAP3Q9BZ76 1288 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 SLC13A1Q9BZW2 595 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 TSGA10Q9BZW7 698 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 CLPBQ9H078 707 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 ABCG8Q9H221 673 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 C10orf88Q9H8K7 445 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 NLGN3Q9NZ94 848 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 UBP1Q9NZI7 540 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 KLHL8Q9P2G9 620 aaPredicted RBP9.15□□□□□ -0.94
SYN3-211ENST00000472027 APOBEC3BQ9UH17 382 aaKnown RBP9.15□□□□□ -0.94
SYN3-211ENST00000472027 CD84Q9UIB8 345 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 KLK13Q9UKR3 277 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 DNPEPQ9ULA0 475 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 GUCA1BQ9UMX6 200 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 NEUROG3Q9Y4Z2 214 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 PCDHGA1Q9Y5H4 931 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 CAPN6Q9Y6Q1 641 aa9.15□□□□□ -0.94
SYN3-211ENST00000472027 SHROOM3Q8TF72 1996 aa9.15□□□□□ -0.95
SYN3-211ENST00000472027 GOLGA6CA6NDK9 693 aa9.14□□□□□ -0.95
SYN3-211ENST00000472027 GOLGA6BA6NDN3 693 aa9.14□□□□□ -0.95
SYN3-211ENST00000472027 CAPN8A6NHC0 703 aa9.14□□□□□ -0.95
SYN3-211ENST00000472027 PDE2AO00408 941 aaPredicted RBP9.14□□□□□ -0.95
SYN3-211ENST00000472027 TPP1O14773 563 aa9.14□□□□□ -0.95
SYN3-211ENST00000472027 YY2O15391 372 aa9.14□□□□□ -0.95
SYN3-211ENST00000472027 PMPCBO75439 489 aa9.14□□□□□ -0.95
SYN3-211ENST00000472027 GCATO75600 419 aa9.14□□□□□ -0.95
SYN3-211ENST00000472027 RASGRP1O95267 797 aa9.14□□□□□ -0.95
SYN3-211ENST00000472027 GOLGA6DP0CG33 693 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms