RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 MAGEE1Q9HCI5 957 aa15.3■□□□□ 0.04
SDC3-203ENST00000471567 UBP1Q9NZI7 540 aa15.3■□□□□ 0.04
SDC3-203ENST00000471567 AAR2Q9Y312 384 aaKnown RBP15.3■□□□□ 0.04
SDC3-203ENST00000471567 CABIN1Q9Y6J0 2220 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 LRRK1Q38SD2 2015 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 ENC1O14682 589 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 GCATO75600 419 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 FGGP02679 453 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 STC1P52823 247 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 THOP1P52888 689 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 PDE1CQ14123 709 aaPredicted RBP15.29■□□□□ 0.04
SDC3-203ENST00000471567 GALNT3Q14435 633 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 INPP5AQ14642 412 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 PTPRRQ15256 657 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 SIX1Q15475 284 aaPredicted RBP15.29■□□□□ 0.04
SDC3-203ENST00000471567 OASLQ15646 514 aaKnown RBP15.29■□□□□ 0.04
SDC3-203ENST00000471567 CCNG2Q16589 344 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 CDKN3Q16667 212 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 PRAMEF14Q5SWL7 426 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 DENND2CQ68D51 928 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 ESRP1Q6NXG1 681 aaKnown RBP15.29■□□□□ 0.04
SDC3-203ENST00000471567 DRICH1Q6PGQ1 229 aaPredicted RBP15.29■□□□□ 0.04
SDC3-203ENST00000471567 KDELC2Q7Z4H8 507 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 PIP4P1Q86T03 277 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 NLRP8Q86W28 1048 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 NRSN1Q8IZ57 195 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 FAM71DQ8N9W8 422 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 CCDC110Q8TBZ0 833 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 ATG4AQ8WYN0 398 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 RTP4Q96DX8 246 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 MRGPRX2Q96LB1 330 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 SMIM14Q96QK8 99 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 TMEM121Q9BTD3 319 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 HOMER3Q9NSC5 361 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 PYCARDQ9ULZ3 195 aa15.29■□□□□ 0.04
SDC3-203ENST00000471567 SPTBN4Q9H254 2564 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 C1orf232A0A0U1RR37 186 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 RGSL1A5PLK6 1076 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 USP27XA6NNY8 438 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 FLRT2O43155 660 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 CLDN7O95471 211 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 PCCBP05166 539 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 HOXC4P09017 264 aaPredicted RBP15.28■□□□□ 0.04
SDC3-203ENST00000471567 HLA-DPA1P20036 260 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 PSMB4P28070 264 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 TEAD1P28347 426 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 CXCR5P32302 372 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 TRIM23P36406 574 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 ETV3P41162 512 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 DPTQ07507 201 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 FZD2Q14332 565 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 SHBQ15464 509 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 PARP6Q2NL67 630 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 P3H1Q32P28 736 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 PNCKQ6P2M8 343 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 ARHGEF18Q6ZSZ5 1173 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 Q6ZVL8 140 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 ZNF765Q7L2R6 523 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 PARGQ86W56 976 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 KLHDC8BQ8IXV7 354 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 RASGEF1CQ8N431 466 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 CCHCR1Q8TD31 782 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 C1orf54Q8WWF1 131 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 APOOQ9BUR5 198 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 SLC32A1Q9H598 525 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 TTC7AQ9ULT0 858 aaPredicted RBP15.28■□□□□ 0.04
SDC3-203ENST00000471567 ZNF148Q9UQR1 794 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 DRG1Q9Y295 367 aaKnown RBP15.28■□□□□ 0.04
SDC3-203ENST00000471567 LAMA1P25391 3075 aa15.28■□□□□ 0.04
SDC3-203ENST00000471567 TMEM131Q92545 1883 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 DCDC2BA2VCK2 349 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 GOLGA6CA6NDK9 693 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 GOLGA6BA6NDN3 693 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 FGF1P05230 155 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 PYGLP06737 847 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 ITGAVP06756 1048 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 C1SP09871 688 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 ATXN1LP0C7T5 689 aaKnown RBP15.27■□□□□ 0.04
SDC3-203ENST00000471567 GOLGA6DP0CG33 693 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 TSHRP16473 764 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 HTR1BP28222 390 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 EPHA8P29322 1005 aaPredicted RBP15.27■□□□□ 0.04
SDC3-203ENST00000471567 NFATC4Q14934 902 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 SLC1A5Q15758 541 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 LONRF2Q1L5Z9 754 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 INAVAQ3KP66 663 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 MACC1Q6ZN28 852 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 NAXDQ8IW45 347 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 PLA2G15Q8NCC3 412 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 IPMKQ8NFU5 416 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 ATL2Q8NHH9 583 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 SAP25Q8TEE9 199 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 LRRC45Q96CN5 670 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 GORASP1Q9BQQ3 440 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 FSD1LQ9BXM9 530 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 TRABDQ9H4I3 376 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 ZFYVE1Q9HBF4 777 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 KCND1Q9NSA2 647 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 GOLGA6AQ9NYA3 693 aa15.27■□□□□ 0.04
SDC3-203ENST00000471567 PKD2L2Q9NZM6 624 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms