RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 ZNF501Q96CX3 271 aaPredicted RBP1.95□□□□□ -2.1
COMMD3-209ENST00000471350 LGALS12Q96DT0 336 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP1.95□□□□□ -2.1
COMMD3-209ENST00000471350 BPIFA1Q9NP55 256 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 RASSF1Q9NS23 344 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 C1RLQ9NZP8 487 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 RALYQ9UKM9 306 aaKnown RBP1.95□□□□□ -2.1
COMMD3-209ENST00000471350 TTC7AQ9ULT0 858 aaPredicted RBP1.95□□□□□ -2.1
COMMD3-209ENST00000471350 DNAJC16Q9Y2G8 782 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 DDX52Q9Y2R4 599 aaKnown RBP eCLIP1.95□□□□□ -2.1
COMMD3-209ENST00000471350 FAM96BQ9Y3D0 163 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 SMAD5-AS1Q9Y6J3 95 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 PDS5AQ29RF7 1337 aaKnown RBP1.94□□□□□ -2.1
COMMD3-209ENST00000471350 A0A0G2JLW4 131 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 PABPN1LA6NDY0 278 aaKnown RBP1.94□□□□□ -2.1
COMMD3-209ENST00000471350 CBY3A6NI87 242 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 BLOC1S5-TXNDC5H3BN57 136 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 PER2O15055 1255 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 IRAK2O43187 625 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 GUCY1B2O75343 617 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 MMP2P08253 660 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 PAX1P15863 534 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 EFNA5P52803 228 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 LINC01547P58512 204 aaPredicted RBP1.94□□□□□ -2.1
COMMD3-209ENST00000471350 BRWD1-AS2P59051 145 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 CHRNDQ07001 517 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 TRIM14Q14142 442 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 HIST2H2ACQ16777 129 aaPredicted RBP1.94□□□□□ -2.1
COMMD3-209ENST00000471350 MMEL1Q495T6 779 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 MAP9Q49MG5 647 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 PAPPA-AS1Q5QFB9 102 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 SFMBT2Q5VUG0 894 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 METTL2BQ6P1Q9 378 aaKnown RBP1.94□□□□□ -2.1
COMMD3-209ENST00000471350 LCTLQ6UWM7 567 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 C17orf99Q6UX52 265 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 GFRALQ6UXV0 394 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 ZNF852Q6ZMS4 543 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 LINGO2Q7L985 606 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 ADGRG6Q86SQ4 1221 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 TADA2BQ86TJ2 420 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 GPAT4Q86UL3 456 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 TMEM219Q86XT9 240 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 KRTAP7-1Q8IUC3 87 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 CIARTQ8N365 385 aaPredicted RBP1.94□□□□□ -2.1
COMMD3-209ENST00000471350 C11orf65Q8NCR3 313 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 TNIP2Q8NFZ5 429 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 SPATA22Q8NHS9 363 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 SLC20A1Q8WUM9 679 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 STAMQ92783 540 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 ABTB1Q969K4 478 aaPredicted RBP1.94□□□□□ -2.1
COMMD3-209ENST00000471350 STAMBPL1Q96FJ0 436 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 METTL2AQ96IZ6 378 aaKnown RBP1.94□□□□□ -2.1
COMMD3-209ENST00000471350 BBS4Q96RK4 519 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 NUF2Q9BZD4 464 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 UBXN6Q9BZV1 441 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 LMAN2LQ9H0V9 348 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 TAOK3Q9H2K8 898 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 NDST4Q9H3R1 872 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 MROH8Q9H579 483 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 TMEM30AQ9NV96 361 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 PEMTQ9UBM1 199 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 GRHPRQ9UBQ7 328 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 KCNK7Q9Y2U2 307 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 LOXL2Q9Y4K0 774 aa1.94□□□□□ -2.1
COMMD3-209ENST00000471350 TTC36A6NLP5 189 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 BCAT2O15382 392 aaPredicted RBP1.93□□□□□ -2.1
COMMD3-209ENST00000471350 EXTL3O43909 919 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 KLK8O60259 260 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 MT-CYBP00156 380 aaPredicted RBP1.93□□□□□ -2.1
COMMD3-209ENST00000471350 G6PDP11413 515 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 FGF5P12034 268 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 HLA-DOBP13765 273 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 ITGAXP20702 1163 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 S1PR1P21453 382 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 SERPINB3P29508 390 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 BDKRB2P30411 391 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 CHRNB4P30926 498 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 NOVP48745 357 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 AMPHP49418 695 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 METAP2P50579 478 aaKnown RBP eCLIP1.93□□□□□ -2.1
COMMD3-209ENST00000471350 HNRNPH2P55795 449 aaKnown RBP1.93□□□□□ -2.1
COMMD3-209ENST00000471350 GTF2H2Q13888 395 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 PPP2R5BQ15173 497 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 TMEM35AQ53FP2 167 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 GGNBP1Q5YKI7 109 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 JMJD6Q6NYC1 403 aaPredicted RBP1.93□□□□□ -2.1
COMMD3-209ENST00000471350 GTF2H2CQ6P1K8 395 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 MTSS1LQ765P7 747 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 RRM2BQ7LG56 351 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 C2CD5Q86YS7 1000 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 CHERPQ8IWX8 916 aaKnown RBP1.93□□□□□ -2.1
COMMD3-209ENST00000471350 FTSJ3Q8IY81 847 aaKnown RBP1.93□□□□□ -2.1
COMMD3-209ENST00000471350 SRBD1Q8N5C6 995 aaKnown RBP1.93□□□□□ -2.1
COMMD3-209ENST00000471350 SPPL3Q8TCT6 385 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 TM9SF4Q92544 642 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 RND1Q92730 232 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 TRIM63Q969Q1 353 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 SCRN2Q96FV2 425 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 ST6GAL2Q96JF0 529 aa1.93□□□□□ -2.1
COMMD3-209ENST00000471350 ZNF354BQ96LW1 612 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms