RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 RUNX3Q13761 415 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 FASTKD1Q53R41 847 aaKnown RBP9.39□□□□□ -0.91
VPS52-216ENST00000471309 TAF1BQ53T94 588 aaPredicted RBP9.39□□□□□ -0.91
VPS52-216ENST00000471309 AARS2Q5JTZ9 985 aaKnown RBP9.39□□□□□ -0.91
VPS52-216ENST00000471309 GDPD4Q6W3E5 623 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 USP45Q70EL2 814 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 MTSS1LQ765P7 747 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 LYSMD3Q7Z3D4 306 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 CCDC91Q7Z6B0 441 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 CMC1Q7Z7K0 106 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 ZSWIM9Q86XI8 627 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 PAF1Q8N7H5 531 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 TERB1Q8NA31 727 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 SMRP1Q8NCR6 262 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 ACVR1CQ8NER5 493 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 ZNF473Q8WTR7 871 aaKnown RBP9.39□□□□□ -0.91
VPS52-216ENST00000471309 CYB5D2Q8WUJ1 264 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 SORCS1Q8WY21 1168 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 NXPE3Q969Y0 559 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 TSPAN17Q96FV3 270 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 SMIM14Q96QK8 99 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 CCT8L2Q96SF2 557 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 PAIP2Q9BPZ3 127 aaKnown RBP9.39□□□□□ -0.91
VPS52-216ENST00000471309 KXD1Q9BQD3 176 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 HEPHQ9BQS7 1158 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 OSBPL1AQ9BXW6 950 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 GPR63Q9BZJ6 419 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 PLA2G2FQ9BZM2 168 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 SLC13A1Q9BZW2 595 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 NSRP1Q9H0G5 558 aaKnown RBP9.39□□□□□ -0.91
VPS52-216ENST00000471309 TTYH1Q9H313 450 aaPredicted RBP9.39□□□□□ -0.91
VPS52-216ENST00000471309 POMKQ9H5K3 350 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 SUDS3Q9H7L9 328 aaPredicted RBP9.39□□□□□ -0.91
VPS52-216ENST00000471309 CAB39LQ9H9S4 337 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 FBXO6Q9NRD1 293 aaPredicted RBP9.39□□□□□ -0.91
VPS52-216ENST00000471309 ELOVL2Q9NXB9 296 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 IL17CQ9P0M4 197 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 SLC39A10Q9ULF5 831 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 PHTF1Q9UMS5 762 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 PPIL1Q9Y3C6 166 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 PKP3Q9Y446 797 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 DOCK8Q8NF50 2099 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 MYOFQ9NZM1 2061 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 COL4A2P08572 1712 aa9.39□□□□□ -0.91
VPS52-216ENST00000471309 TTC34A8MYJ7 566 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 TCP11X1B4DZS4 312 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 PRRT4C9JH25 899 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 ARNTLO00327 626 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 BIRC5O15392 142 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 BNIP3LO60238 219 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 PLIN3O60664 434 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 SLC4A1P02730 911 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 UGT2B4P06133 528 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 C2P06681 752 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 SLC35E2BP0CK96 405 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 COL6A2P12110 1019 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 TAC1P20366 129 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 DRD4P21917 467 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 CRABP2P29373 138 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 MC4RP32245 332 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 FOXN2P32314 431 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 GJA4P35212 333 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 HNF1BP35680 557 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 OPRD1P41143 372 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 SLC6A11P48066 632 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 RAB10P61026 200 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 POLR2LP62875 67 aaKnown RBP9.38□□□□□ -0.91
VPS52-216ENST00000471309 GRM2Q14416 872 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 SEMA3AQ14563 771 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 USP10Q14694 798 aaKnown RBP9.38□□□□□ -0.91
VPS52-216ENST00000471309 CDKN3Q16667 212 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 ZNF789Q5FWF6 425 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 RNF187Q5TA31 235 aaPredicted RBP9.38□□□□□ -0.91
VPS52-216ENST00000471309 BRAT1Q6PJG6 821 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 CNSTQ6PJW8 725 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 PARM1Q6UWI2 310 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 MICALCLQ6ZW33 695 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 SDCCAG8Q86SQ7 713 aaPredicted RBP9.38□□□□□ -0.91
VPS52-216ENST00000471309 SLC41A1Q8IVJ1 513 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 LRRC34Q8IZ02 419 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 CHST14Q8NCH0 376 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 RAB3IL1Q8TBN0 382 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 HCAR2Q8TDS4 363 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 LRRC8CQ8TDW0 803 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 FGF14Q92915 247 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 SCRN2Q96FV2 425 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 ELMO2Q96JJ3 720 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 TCF12Q99081 682 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 OMDQ99983 421 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 C12orf65Q9H3J6 166 aaKnown RBP9.38□□□□□ -0.91
VPS52-216ENST00000471309 ZFYVE1Q9HBF4 777 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 EPS15L1Q9UBC2 864 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 IL36AQ9UHA7 158 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 FKBPLQ9UIM3 349 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 TLK1Q9UKI8 766 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 EMCNQ9ULC0 261 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 VPS9D1Q9Y2B5 631 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 WASF2Q9Y6W5 498 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 CHD7Q9P2D1 2997 aa9.38□□□□□ -0.91
VPS52-216ENST00000471309 A0A087X1B8 175 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms