RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 EXOC3L1Q86VI1 746 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 NDUFAF2Q8N183 169 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 PPM1NQ8N819 430 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 TTC8Q8TAM2 541 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 STYXQ8WUJ0 223 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 ZNF669Q96BR6 464 aaPredicted RBP9.19□□□□□ -0.94
PTPRE-207ENST00000471218 ZNF641Q96N77 438 aaPredicted RBP9.19□□□□□ -0.94
PTPRE-207ENST00000471218 LRRC3BQ96PB8 259 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 LYSMD1Q96S90 227 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 CAPS2Q9BXY5 557 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 EBF3Q9H4W6 596 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 SLC32A1Q9H598 525 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 NOD2Q9HC29 1040 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 DUS2Q9NX74 493 aaKnown RBP9.19□□□□□ -0.94
PTPRE-207ENST00000471218 NKIRAS1Q9NYS0 192 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 LHX3Q9UBR4 397 aa9.19□□□□□ -0.94
PTPRE-207ENST00000471218 NUP210Q8TEM1 1887 aaPredicted RBP9.19□□□□□ -0.94
PTPRE-207ENST00000471218 NYNRINQ9P2P1 1898 aaKnown RBP9.19□□□□□ -0.94
PTPRE-207ENST00000471218 CEP295Q9C0D2 2601 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 USP24Q9UPU5 2620 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 CCDC189A1A4V9 331 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 MUSKO15146 869 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 PFDN6O15212 129 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 POP4O95707 220 aaKnown RBP9.18□□□□□ -0.94
PTPRE-207ENST00000471218 GSTA1P08263 222 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 BRAFP15056 766 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 SERPINA4P29622 427 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 HLA-FP30511 346 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 GJA4P35212 333 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 NNMTP40261 264 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 ATRXP46100 2492 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 ARCN1P48444 511 aaKnown RBP9.18□□□□□ -0.94
PTPRE-207ENST00000471218 NOVA1P51513 510 aaKnown RBP9.18□□□□□ -0.94
PTPRE-207ENST00000471218 SUOXP51687 545 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 DGKEP52429 567 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 LIMK2P53671 638 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 ECT2LQ008S8 904 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 SPARCL1Q14515 664 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 DHCR24Q15392 516 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 TERF2Q15554 542 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 TAF1AQ15573 450 aaPredicted RBP9.18□□□□□ -0.94
PTPRE-207ENST00000471218 KCTD19Q17RG1 926 aaPredicted RBP9.18□□□□□ -0.94
PTPRE-207ENST00000471218 INSCQ1MX18 579 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 SIRPB2Q5JXA9 342 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 LY6G5CQ5SRR4 150 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 CERCAMQ5T4B2 595 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 UBAP2Q5T6F2 1119 aaKnown RBP9.18□□□□□ -0.94
PTPRE-207ENST00000471218 FSTL4Q6MZW2 842 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 PSAPL1Q6NUJ1 521 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 PACS1Q6VY07 963 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 RGS9BPQ6ZS82 235 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 RABEPKQ7Z6M1 372 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 SRLQ86TD4 932 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 KCNMB4Q86W47 210 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 RASSF3Q86WH2 238 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 TMEM25Q86YD3 366 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 CTAGE3PQ8IX95 158 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 ETFBKMTQ8IXQ9 262 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 KDF1Q8NAX2 398 aaPredicted RBP9.18□□□□□ -0.94
PTPRE-207ENST00000471218 TSTD1Q8NFU3 115 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 OR2AP1Q8NGE2 309 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 GPR150Q8NGU9 434 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 UHMK1Q8TAS1 419 aaKnown RBP9.18□□□□□ -0.94
PTPRE-207ENST00000471218 NUP205Q92621 2012 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 SPACA7Q96KW9 195 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 TCF12Q99081 682 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 MCMBPQ9BTE3 642 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 EDEM2Q9BV94 578 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 NUSAP1Q9BXS6 441 aaKnown RBP9.18□□□□□ -0.94
PTPRE-207ENST00000471218 OSBPL1AQ9BXW6 950 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 DUSP15Q9H1R2 295 aaPredicted RBP9.18□□□□□ -0.94
PTPRE-207ENST00000471218 RHOJQ9H4E5 214 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 ECT2Q9H8V3 914 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 MAGEE1Q9HCI5 957 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 TMEM9BQ9NQ34 198 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 INTS9Q9NV88 658 aaKnown RBP9.18□□□□□ -0.94
PTPRE-207ENST00000471218 UBP1Q9NZI7 540 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.18□□□□□ -0.94
PTPRE-207ENST00000471218 PPIL1Q9Y3C6 166 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 RAI2Q9Y5P3 530 aa9.18□□□□□ -0.94
PTPRE-207ENST00000471218 COL4A3Q01955 1670 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 TMEM120BA0PK00 339 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 SMIM23A6NLE4 172 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 C2orf81A6NN90 581 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 ANKRD66B4E2M5 251 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 NEDD8-MDP1E9PL57 170 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 H7C0S8 307 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 TYROBPO43914 113 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 SNAP91O60641 907 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 USP12O75317 370 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 PGLSO95336 258 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 TRIM16O95361 564 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 EGFP01133 1207 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 CYP17A1P05093 508 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 DLDP09622 509 aaKnown RBP9.17□□□□□ -0.94
PTPRE-207ENST00000471218 COL6A2P12110 1019 aa9.17□□□□□ -0.94
PTPRE-207ENST00000471218 POLR2EP19388 210 aaKnown RBP9.17□□□□□ -0.94
PTPRE-207ENST00000471218 OGNP20774 298 aaKnown RBP9.17□□□□□ -0.94
PTPRE-207ENST00000471218 HPDP32754 393 aaPredicted RBP9.17□□□□□ -0.94
PTPRE-207ENST00000471218 HOXD12P35452 270 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms