RNA–Protein interactions for RNA: ENST00000470495.1

HOXB3-205, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 4,208 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-205ENST00000470495 TNFRSF10AO00220 468 aa16.57■□□□□ 0.24
HOXB3-205ENST00000470495 DCXO43602 365 aa16.57■□□□□ 0.24
HOXB3-205ENST00000470495 CKBP12277 381 aa16.57■□□□□ 0.24
HOXB3-205ENST00000470495 RPL17P18621 184 aaKnown RBP16.57■□□□□ 0.24
HOXB3-205ENST00000470495 CXCR3P49682 368 aa16.57■□□□□ 0.24
HOXB3-205ENST00000470495 GSTM4Q03013 218 aa16.57■□□□□ 0.24
HOXB3-205ENST00000470495 NAB1Q13506 487 aa16.57■□□□□ 0.24
HOXB3-205ENST00000470495 KLHL35Q6PF15 583 aa16.57■□□□□ 0.24
HOXB3-205ENST00000470495 PPP1R2P1Q96PQ5 205 aa16.57■□□□□ 0.24
HOXB3-205ENST00000470495 PCDHB8Q9UN66 801 aa16.57■□□□□ 0.24
HOXB3-205ENST00000470495 SF3B1O75533 1304 aaKnown RBP eCLIP16.57■□□□□ 0.24
HOXB3-205ENST00000470495 ENO3P13929 434 aaPredicted RBP16.57■□□□□ 0.24
HOXB3-205ENST00000470495 MLLT3P42568 568 aaPredicted RBP16.57■□□□□ 0.24
HOXB3-205ENST00000470495 CDK7P50613 346 aa16.57■□□□□ 0.24
HOXB3-205ENST00000470495 COPAP53621 1224 aa16.57■□□□□ 0.24
HOXB3-205ENST00000470495 KIF19Q2TAC6 998 aa16.57■□□□□ 0.24
HOXB3-205ENST00000470495 ESRP1Q6NXG1 681 aaKnown RBP16.57■□□□□ 0.24
HOXB3-205ENST00000470495 C16orf59Q7L2K0 433 aa16.57■□□□□ 0.24
HOXB3-205ENST00000470495 WDR83Q9BRX9 315 aaKnown RBP16.57■□□□□ 0.24
HOXB3-205ENST00000470495 TAGLN3Q9UI15 199 aa16.57■□□□□ 0.24
HOXB3-205ENST00000470495 ADAM28Q9UKQ2 775 aa16.57■□□□□ 0.24
HOXB3-205ENST00000470495 FAM32AQ9Y421 112 aaKnown RBP16.57■□□□□ 0.24
HOXB3-205ENST00000470495 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.57■□□□□ 0.24
HOXB3-205ENST00000470495 ICMTO60725 284 aa16.57■□□□□ 0.24
HOXB3-205ENST00000470495 GATMP50440 423 aa16.57■□□□□ 0.24
HOXB3-205ENST00000470495 MPP1Q00013 466 aa16.57■□□□□ 0.24
HOXB3-205ENST00000470495 ZNF177Q13360 481 aaPredicted RBP16.57■□□□□ 0.24
HOXB3-205ENST00000470495 CLPPQ16740 277 aaPredicted RBP16.57■□□□□ 0.24
HOXB3-205ENST00000470495 DNAL1Q4LDG9 190 aa16.57■□□□□ 0.24
HOXB3-205ENST00000470495 LRRC8DQ7L1W4 858 aa16.57■□□□□ 0.24
HOXB3-205ENST00000470495 SAR1AQ9NR31 198 aa16.57■□□□□ 0.24
HOXB3-205ENST00000470495 KIF13BQ9NQT8 1826 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 TNFRSF21O75509 655 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 CASP2P42575 452 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 ABCE1P61221 599 aaKnown RBP16.56■□□□□ 0.24
HOXB3-205ENST00000470495 PRKD1Q15139 912 aaPredicted RBP16.56■□□□□ 0.24
HOXB3-205ENST00000470495 PLEKHM3Q6ZWE6 761 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 DENND6AQ8IWF6 608 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 RAD54BQ9Y620 910 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 SYNCRIPO60506 623 aaKnown RBP16.56■□□□□ 0.24
HOXB3-205ENST00000470495 RFPL1O75677 317 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 ZMPSTE24O75844 475 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 INHAP05111 366 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 RPL5P46777 297 aaKnown RBP16.56■□□□□ 0.24
HOXB3-205ENST00000470495 SLC18A1P54219 525 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 COPZ1P61923 177 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 SLC18A2Q05940 514 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 ZNF460Q14592 562 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 GRM3Q14832 879 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 VWA5B1Q5TIE3 1220 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 ZNF398Q8TD17 642 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 SEMA3CQ99985 751 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 C17orf80Q9BSJ5 609 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 PTTG2Q9NZH5 202 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 AK5Q9Y6K8 562 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 E2F3O00716 465 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 DCLK1O15075 740 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 PLIN3O60664 434 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 NDUFS3O75489 264 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 SUPT7LO94864 414 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 PGGT1BP53609 377 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 RFWD3Q6PCD5 774 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 CORO6Q6QEF8 472 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 LDB1Q86U70 411 aaPredicted RBP16.56■□□□□ 0.24
HOXB3-205ENST00000470495 TSPAN17Q96FV3 270 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 ACE2Q9BYF1 805 aaPredicted RBP16.56■□□□□ 0.24
HOXB3-205ENST00000470495 EIF2B3Q9NR50 452 aaKnown RBP16.56■□□□□ 0.24
HOXB3-205ENST00000470495 TRPM5Q9NZQ8 1165 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 E5RI56 91 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 H0Y626 953 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 RGS5O15539 181 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 OR1D2P34982 312 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 NEK3P51956 506 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 ELAVL2Q12926 359 aaKnown RBP16.56■□□□□ 0.24
HOXB3-205ENST00000470495 SPIDRQ14159 915 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 PRSS55Q6UWB4 352 aaPredicted RBP16.56■□□□□ 0.24
HOXB3-205ENST00000470495 RTP4Q96DX8 246 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 CMTM5Q96DZ9 223 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 SCLYQ96I15 445 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 RNF208Q9H0X6 261 aa16.56■□□□□ 0.24
HOXB3-205ENST00000470495 UXTQ9UBK9 157 aaPredicted RBP16.56■□□□□ 0.24
HOXB3-205ENST00000470495 HEATR9A2RTY3 570 aa16.55■□□□□ 0.24
HOXB3-205ENST00000470495 PRR23AA6NEV1 266 aa16.55■□□□□ 0.24
HOXB3-205ENST00000470495 PIGNO95427 931 aa16.55■□□□□ 0.24
HOXB3-205ENST00000470495 LSAMPQ13449 338 aa16.55■□□□□ 0.24
HOXB3-205ENST00000470495 DPYSQ14117 519 aa16.55■□□□□ 0.24
HOXB3-205ENST00000470495 SEL1L3Q68CR1 1132 aa16.55■□□□□ 0.24
HOXB3-205ENST00000470495 ARCQ7LC44 396 aa16.55■□□□□ 0.24
HOXB3-205ENST00000470495 DDIASQ8IXT1 998 aa16.55■□□□□ 0.24
HOXB3-205ENST00000470495 TMA16Q96EY4 203 aaKnown RBP16.55■□□□□ 0.24
HOXB3-205ENST00000470495 RBBP8Q99708 897 aa16.55■□□□□ 0.24
HOXB3-205ENST00000470495 SERHL2Q9H4I8 314 aa16.55■□□□□ 0.24
HOXB3-205ENST00000470495 PNPLA8Q9NP80 782 aa16.55■□□□□ 0.24
HOXB3-205ENST00000470495 ADA2Q9NZK5 511 aa16.55■□□□□ 0.24
HOXB3-205ENST00000470495 AFF4Q9UHB7 1163 aaKnown RBP16.55■□□□□ 0.24
HOXB3-205ENST00000470495 EDARQ9UNE0 448 aa16.55■□□□□ 0.24
HOXB3-205ENST00000470495 CDYLQ9Y232 598 aa16.55■□□□□ 0.24
HOXB3-205ENST00000470495 PRR5-ARHGAP8B1AHC4 643 aa16.55■□□□□ 0.24
HOXB3-205ENST00000470495 FAM47E-STBD1D6RA91 191 aa16.55■□□□□ 0.24
HOXB3-205ENST00000470495 RHOCP08134 193 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms