RNA–Protein interactions for RNA: ENST00000470243.5

SRRM1-208, Transcript of serine and arginine repetitive matrix 1, human

TSL 5

Gene SRRM1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM1-208	ENST00000470243	GFPT2	O94808	682 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	SEC31A	O94979	1220 aa	Known RBP	4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	MLYCD	O95822	493 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	SCGB1D1	O95968	90 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	SPARC	P09486	303 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	UNG	P13051	313 aa	Predicted RBP	4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	YWHAQ	P27348	245 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	BSG	P35613	385 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	SLC16A2	P36021	539 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	TMPO	P42166	694 aa	Known RBP	4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	DRG2	P55039	364 aa	Known RBP	4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	EIF3B	P55884	814 aa	Known RBP	4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	NUCB2	P80303	420 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	CYP4A11	Q02928	519 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	FOXD4	Q12950	439 aa	Predicted RBP	4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	HNRNPA0	Q13151	305 aa	Known RBP	4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	DAZAP2	Q15038	168 aa	Predicted RBP	4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	RABEP1	Q15276	862 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	SMTNL2	Q2TAL5	461 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	FAM205BP	Q63HN1	556 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	SLC46A3	Q7Z3Q1	461 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	ADSSL1	Q8N142	457 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	SLC25A41	Q8N5S1	370 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	DPP10	Q8N608	796 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	C11orf65	Q8NCR3	313 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	OR4N2	Q8NGD1	307 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	RASSF8	Q8NHQ8	419 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	CREB3L4	Q8TEY5	395 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	PLEKHF1	Q96S99	279 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	WDR6	Q9NNW5	1121 aa	Known RBP	4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	PNRC2	Q9NPJ4	139 aa	Known RBP	4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	THSD1	Q9NS62	852 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	FLRT1	Q9NZU1	646 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	AGO2	Q9UKV8	859 aa	Known RBP	4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	RAP2C	Q9Y3L5	183 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	PCDHGB5	Q9Y5G0	923 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	SCIN	Q9Y6U3	715 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	CAPN7	Q9Y6W3	813 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	ABCC4	O15439	1325 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243		A0A1W2PP64	1363 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	CD163L1	Q9NR16	1453 aa		4.36	□□□□□ -1.71
SRRM1-208	ENST00000470243	MYH15	Q9Y2K3	1946 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	ANKRD18B	A2A2Z9	1011 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	DYTN	A2CJ06	578 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	FAM157A	C9JC47	383 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243		E5RJQ4	531 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	MASP2	O00187	686 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	PTP4A3	O75365	173 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	LCK	P06239	509 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	ACADM	P11310	421 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	MSN	P26038	577 aa	Known RBP	4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	CLDN2	P57739	230 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	ARF3	P61204	181 aa	Predicted RBP	4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	YWHAZ	P63104	245 aa	Known RBP	4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	ARF1	P84077	181 aa	Known RBP	4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	ID2	Q02363	134 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	GAD2	Q05329	585 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	TMEM115	Q12893	351 aa	Predicted RBP	4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	TAF11	Q15544	211 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243		Q4G0T1	1027 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	C6orf10	Q5SRN2	563 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	CDC73	Q6P1J9	531 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	CFAP161	Q6P656	301 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	FASTKD5	Q7L8L6	764 aa	Known RBP	4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	UBE2Q1	Q7Z7E8	422 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	GPSM1	Q86YR5	675 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	DNAJC10	Q8IXB1	793 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	CADM3	Q8N126	398 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	ZG16B	Q96DA0	208 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	SDF4	Q9BRK5	362 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	TUBB6	Q9BUF5	446 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	SCPEP1	Q9HB40	452 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	DIAPH3	Q9NSV4	1193 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	MSRB1	Q9NZV6	116 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	TNN	Q9UQP3	1299 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	WDFY4	Q6ZS81	3184 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	REV3L	O60673	3130 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	PCSK5	Q92824	1860 aa		4.35	□□□□□ -1.71
SRRM1-208	ENST00000470243	BDP1	A6H8Y1	2624 aa		4.34	□□□□□ -1.71
SRRM1-208	ENST00000470243		A6NCN8	305 aa		4.34	□□□□□ -1.71
SRRM1-208	ENST00000470243	CGB1	A6NKQ9	187 aa		4.34	□□□□□ -1.71
SRRM1-208	ENST00000470243	DYNC1I1	O14576	645 aa		4.34	□□□□□ -1.71
SRRM1-208	ENST00000470243	SEC14L2	O76054	403 aa		4.34	□□□□□ -1.71
SRRM1-208	ENST00000470243	DDN	O94850	711 aa	Predicted RBP	4.34	□□□□□ -1.71
SRRM1-208	ENST00000470243	BAG4	O95429	457 aa	Known RBP	4.34	□□□□□ -1.71
SRRM1-208	ENST00000470243	MBD3	O95983	291 aa		4.34	□□□□□ -1.71
SRRM1-208	ENST00000470243	HEXA	P06865	529 aa		4.34	□□□□□ -1.71
SRRM1-208	ENST00000470243	CHRNB1	P11230	501 aa		4.34	□□□□□ -1.71
SRRM1-208	ENST00000470243	LAMP2	P13473	410 aa		4.34	□□□□□ -1.71
SRRM1-208	ENST00000470243	SLC2A4	P14672	509 aa		4.34	□□□□□ -1.71
SRRM1-208	ENST00000470243	CTPS1	P17812	591 aa		4.34	□□□□□ -1.71
SRRM1-208	ENST00000470243	TNFSF8	P32971	234 aa		4.34	□□□□□ -1.71
SRRM1-208	ENST00000470243	ARL3	P36405	182 aa		4.34	□□□□□ -1.71
SRRM1-208	ENST00000470243	CPOX	P36551	454 aa		4.34	□□□□□ -1.71
SRRM1-208	ENST00000470243	MLH1	P40692	756 aa		4.34	□□□□□ -1.71
SRRM1-208	ENST00000470243	RPL7A	P62424	266 aa	Known RBP	4.34	□□□□□ -1.71
SRRM1-208	ENST00000470243	CEBPZ	Q03701	1054 aa	Known RBP	4.34	□□□□□ -1.71
SRRM1-208	ENST00000470243	EIF4A2	Q14240	407 aa	Known RBP	4.34	□□□□□ -1.71
SRRM1-208	ENST00000470243	VEPH1	Q14D04	833 aa		4.34	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms