RNA–Protein interactions for RNA: ENST00000470094.1

BRCA2-202, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 5

Gene BRCA2, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-202ENST00000470094 CLGNO14967 610 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 EPB41L2O43491 1005 aaKnown RBP3.96□□□□□ -1.78
BRCA2-202ENST00000470094 PLRG1O43660 514 aaKnown RBP3.96□□□□□ -1.78
BRCA2-202ENST00000470094 SEC31AO94979 1220 aaKnown RBP3.96□□□□□ -1.78
BRCA2-202ENST00000470094 CLDN14O95500 239 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 PMS2P2O95744 297 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 G6PDP11413 515 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 SRCP12931 536 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 DDX5P17844 614 aaKnown RBP3.96□□□□□ -1.78
BRCA2-202ENST00000470094 EPHA8P29322 1005 aaPredicted RBP3.96□□□□□ -1.78
BRCA2-202ENST00000470094 HARS2P49590 506 aaKnown RBP3.96□□□□□ -1.78
BRCA2-202ENST00000470094 METAP2P50579 478 aaKnown RBP eCLIP3.96□□□□□ -1.78
BRCA2-202ENST00000470094 NAE1Q13564 534 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 OASLQ15646 514 aaKnown RBP3.96□□□□□ -1.78
BRCA2-202ENST00000470094 CTF1Q16619 201 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 SLC45A4Q5BKX6 768 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 INTS11Q5TA45 600 aaKnown RBP3.96□□□□□ -1.78
BRCA2-202ENST00000470094 WDR78Q5VTH9 848 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 METTL2BQ6P1Q9 378 aaKnown RBP3.96□□□□□ -1.78
BRCA2-202ENST00000470094 WDR73Q6P4I2 378 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 INO80CQ6PI98 192 aaPredicted RBP3.96□□□□□ -1.78
BRCA2-202ENST00000470094 CCNI2Q6ZMN8 369 aaPredicted RBP3.96□□□□□ -1.78
BRCA2-202ENST00000470094 KRBA2Q6ZNG9 492 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 NR2C2APQ86WQ0 139 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 TANKQ92844 425 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 SKA1Q96BD8 255 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 PABPC5Q96DU9 382 aaKnown RBP3.96□□□□□ -1.78
BRCA2-202ENST00000470094 METTL2AQ96IZ6 378 aaKnown RBP3.96□□□□□ -1.78
BRCA2-202ENST00000470094 IL17FQ96PD4 163 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 NR1H4Q96RI1 486 aaPredicted RBP3.96□□□□□ -1.78
BRCA2-202ENST00000470094 FAM110AQ9BQ89 295 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 NDST4Q9H3R1 872 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 ZHX3Q9H4I2 956 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 ZNF556Q9HAH1 456 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 PREBQ9HCU5 417 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 SLC6A13Q9NSD5 602 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 TAS2R10Q9NYW0 307 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 SWAP70Q9UH65 585 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 ICAM5Q9UMF0 924 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 NAALADL1Q9UQQ1 740 aa3.96□□□□□ -1.78
BRCA2-202ENST00000470094 SCN5AQ14524 2016 aa3.95□□□□□ -1.78
BRCA2-202ENST00000470094 HNRNPCL2B2RXH8 293 aa3.95□□□□□ -1.78
BRCA2-202ENST00000470094 LDB3O75112 727 aa3.95□□□□□ -1.78
BRCA2-202ENST00000470094 RFPL2O75678 378 aa3.95□□□□□ -1.78
BRCA2-202ENST00000470094 LINC00271P0C7V0 271 aa3.95□□□□□ -1.78
BRCA2-202ENST00000470094 MAOAP21397 527 aa3.95□□□□□ -1.78
BRCA2-202ENST00000470094 SEC61BP60468 96 aaKnown RBP3.95□□□□□ -1.78
BRCA2-202ENST00000470094 DDX10Q13206 875 aaKnown RBP3.95□□□□□ -1.78
BRCA2-202ENST00000470094 FGFBP1Q14512 234 aa3.95□□□□□ -1.78
BRCA2-202ENST00000470094 DRAP1Q14919 205 aaPredicted RBP3.95□□□□□ -1.78
BRCA2-202ENST00000470094 C2orf68Q2NKX9 166 aa3.95□□□□□ -1.78
BRCA2-202ENST00000470094 EIF2S3LQ2VIR3 472 aaKnown RBP3.95□□□□□ -1.78
BRCA2-202ENST00000470094 PAPPA-AS1Q5QFB9 102 aa3.95□□□□□ -1.78
BRCA2-202ENST00000470094 GGNBP1Q5YKI7 109 aa3.95□□□□□ -1.78
BRCA2-202ENST00000470094 WBP2NLQ6ICG8 309 aa3.95□□□□□ -1.78
BRCA2-202ENST00000470094 KCTD18Q6PI47 426 aaPredicted RBP3.95□□□□□ -1.78
BRCA2-202ENST00000470094 UNQ6126/PRO20091Q6UXV3 157 aa3.95□□□□□ -1.78
BRCA2-202ENST00000470094 SLC36A4Q6YBV0 504 aa3.95□□□□□ -1.78
BRCA2-202ENST00000470094 QSOX2Q6ZRP7 698 aa3.95□□□□□ -1.78
BRCA2-202ENST00000470094 GSTA5Q7RTV2 222 aa3.95□□□□□ -1.78
BRCA2-202ENST00000470094 TICAM2Q86XR7 235 aa3.95□□□□□ -1.78
BRCA2-202ENST00000470094 NME8Q8N427 588 aa3.95□□□□□ -1.78
BRCA2-202ENST00000470094 RND1Q92730 232 aa3.95□□□□□ -1.78
BRCA2-202ENST00000470094 SLC41A2Q96JW4 573 aa3.95□□□□□ -1.78
BRCA2-202ENST00000470094 SH3GL2Q99962 352 aa3.95□□□□□ -1.78
BRCA2-202ENST00000470094 IFIH1Q9BYX4 1025 aaKnown RBP3.95□□□□□ -1.78
BRCA2-202ENST00000470094 HINT3Q9NQE9 182 aaKnown RBP3.95□□□□□ -1.78
BRCA2-202ENST00000470094 HAO1Q9UJM8 370 aa3.95□□□□□ -1.78
BRCA2-202ENST00000470094 ZNF112Q9UJU3 913 aa3.95□□□□□ -1.78
BRCA2-202ENST00000470094 TTC7AQ9ULT0 858 aaPredicted RBP3.95□□□□□ -1.78
BRCA2-202ENST00000470094 VDAC3Q9Y277 283 aa3.95□□□□□ -1.78
BRCA2-202ENST00000470094 TMEM98Q9Y2Y6 226 aa3.95□□□□□ -1.78
BRCA2-202ENST00000470094 IFITM10A6NMD0 228 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 EIF3CLB5ME19 914 aaKnown RBP3.94□□□□□ -1.78
BRCA2-202ENST00000470094 AKR1B15C9JRZ8 316 aaPredicted RBP3.94□□□□□ -1.78
BRCA2-202ENST00000470094 BUB3O43684 328 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 RRM1P23921 792 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 MAN1A1P33908 653 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 CASP2P42575 452 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 RARSP54136 660 aaKnown RBP3.94□□□□□ -1.78
BRCA2-202ENST00000470094 CASP6P55212 293 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 ZNF155Q12901 538 aaPredicted RBP3.94□□□□□ -1.78
BRCA2-202ENST00000470094 KRT24Q2M2I5 525 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 COL28A1Q2UY09 1125 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 USP41Q3LFD5 358 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 ZNF718Q3SXZ3 478 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 ZNF672Q499Z4 452 aaPredicted RBP3.94□□□□□ -1.78
BRCA2-202ENST00000470094 C6orf141Q5SZD1 244 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 CDC73Q6P1J9 531 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 ATF7IPQ6VMQ6 1270 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 MAATS1Q7Z4T9 603 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 R3HCC1LQ7Z5L2 792 aaKnown RBP3.94□□□□□ -1.78
BRCA2-202ENST00000470094 EXOC3L1Q86VI1 746 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 WDR63Q8IWG1 891 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 CNTROBQ8N137 903 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 SPATA6LQ8N4H0 392 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 MAGEC3Q8TD91 643 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 WFIKKN2Q8TEU8 576 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 SECTM1Q8WVN6 248 aa3.94□□□□□ -1.78
BRCA2-202ENST00000470094 GTF3C6Q969F1 213 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms