RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 MON1AQ86VX9 555 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 PGBD5Q8N414 524 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 PNPLA1Q8N8W4 532 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 GOLM1Q8NBJ4 401 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 RHEBL1Q8TAI7 183 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 HASPINQ8TF76 798 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 PBXIP1Q96AQ6 731 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 MPP4Q96JB8 637 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 KLHL5Q96PQ7 755 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 SLC29A1Q99808 456 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 EFHD1Q9BUP0 239 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 ZYG11BQ9C0D3 744 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 FBRSL1Q9HCM7 1045 aaKnown RBP13.67□□□□□ -0.22
BRCA1-209ENST00000470026 MAP10Q9P2G4 905 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 NUDT5Q9UKK9 219 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 PCDHB8Q9UN66 801 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 DNAJC15Q9Y5T4 150 aa13.67□□□□□ -0.22
BRCA1-209ENST00000470026 MYOCOSA0A1B0GUC4 107 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 ARHGAP10A1A4S6 786 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 CDK14O94921 469 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 MTHFD2P13995 350 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 AKR1A1P14550 325 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 ATP6V1B1P15313 513 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 ZNF23P17027 643 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 SLC7A2P52569 658 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 TMEM259Q4ZIN3 620 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 ALFQ53S48 1182 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 MTX3Q5HYI7 312 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 PIM3Q86V86 326 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 DHFR2Q86XF0 187 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 PCYOX1LQ8NBM8 494 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 OR2T34Q8NGX1 318 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 OR2T3Q8NH03 318 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 HIC2Q96JB3 615 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 HOPXQ9BPY8 73 aaPredicted RBP13.66□□□□□ -0.22
BRCA1-209ENST00000470026 ANKRD60Q9BZ19 345 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 SEMA6AQ9H2E6 1030 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 AKTIPQ9H8T0 292 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 DUS2Q9NX74 493 aaKnown RBP13.66□□□□□ -0.22
BRCA1-209ENST00000470026 RIMKLBQ9ULI2 386 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 PADI3Q9ULW8 664 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 MRPL42Q9Y6G3 142 aaKnown RBP13.66□□□□□ -0.22
BRCA1-209ENST00000470026 CEPT1Q9Y6K0 416 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 TTC3P53804 2025 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 IQCA1LA6NCM1 817 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 AQP12BA6NM10 295 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 CSPG5O95196 566 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 MATN4O95460 622 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 H6PDO95479 791 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 HSPA8P11142 646 aaKnown RBP13.66□□□□□ -0.22
BRCA1-209ENST00000470026 HSD17B1P14061 328 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 MRPL19P49406 292 aaKnown RBP13.66□□□□□ -0.22
BRCA1-209ENST00000470026 STX1BP61266 288 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 PRAMEP78395 509 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 NRF1Q16656 503 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 SPATS1Q496A3 300 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 COQ5Q5HYK3 327 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 NHSL2Q5HYW2 709 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 KANK2Q63ZY3 851 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 PRMT9Q6P2P2 845 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 ISLR2Q6UXK2 745 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 ERMP1Q7Z2K6 904 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 ARHGAP22Q7Z5H3 698 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 LDB1Q86U70 411 aaPredicted RBP13.66□□□□□ -0.22
BRCA1-209ENST00000470026 AQP12AQ8IXF9 295 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 MINDY1Q8N5J2 469 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 HAUS8Q9BT25 410 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 SLC52A3Q9NQ40 469 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 RGS18Q9NS28 235 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 CCM2LQ9NUG4 571 aaPredicted RBP13.66□□□□□ -0.22
BRCA1-209ENST00000470026 OLAHQ9NV23 265 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 IL37Q9NZH6 218 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 ATXN10Q9UBB4 475 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 TMCO1Q9UM00 188 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 NDUFAF1Q9Y375 327 aa13.66□□□□□ -0.22
BRCA1-209ENST00000470026 BPTFQ12830 3046 aa13.65□□□□□ -0.22
BRCA1-209ENST00000470026 A0A0J9YYE9 177 aa13.65□□□□□ -0.22
BRCA1-209ENST00000470026 DRGXA6NNA5 263 aa13.65□□□□□ -0.22
BRCA1-209ENST00000470026 H3BNH8 94 aa13.65□□□□□ -0.22
BRCA1-209ENST00000470026 FXYD1O00168 92 aa13.65□□□□□ -0.22
BRCA1-209ENST00000470026 HTRA2O43464 458 aaPredicted RBP13.65□□□□□ -0.22
BRCA1-209ENST00000470026 CNTN5O94779 1100 aa13.65□□□□□ -0.22
BRCA1-209ENST00000470026 ZNF37AP17032 561 aaPredicted RBP13.65□□□□□ -0.22
BRCA1-209ENST00000470026 ATP6V1B2P21281 511 aa13.65□□□□□ -0.22
BRCA1-209ENST00000470026 TBX4P57082 545 aa13.65□□□□□ -0.22
BRCA1-209ENST00000470026 TUBA4AP68366 448 aa13.65□□□□□ -0.22
BRCA1-209ENST00000470026 YWHAHQ04917 246 aaPredicted RBP13.65□□□□□ -0.22
BRCA1-209ENST00000470026 IL10RBQ08334 325 aa13.65□□□□□ -0.22
BRCA1-209ENST00000470026 FAM219BQ5XKK7 198 aa13.65□□□□□ -0.22
BRCA1-209ENST00000470026 AMIGO2Q86SJ2 522 aa13.65□□□□□ -0.22
BRCA1-209ENST00000470026 NUP93Q8N1F7 819 aa13.65□□□□□ -0.22
BRCA1-209ENST00000470026 PACRGLQ8N7B6 248 aa13.65□□□□□ -0.22
BRCA1-209ENST00000470026 SNX31Q8N9S9 440 aa13.65□□□□□ -0.22
BRCA1-209ENST00000470026 MFSD2AQ8NA29 543 aa13.65□□□□□ -0.22
BRCA1-209ENST00000470026 OR6P1Q8NGX9 317 aa13.65□□□□□ -0.22
BRCA1-209ENST00000470026 PSMG2Q969U7 264 aa13.65□□□□□ -0.22
BRCA1-209ENST00000470026 C8orf48Q96LL4 319 aa13.65□□□□□ -0.22
BRCA1-209ENST00000470026 ATOH8Q96SQ7 321 aa13.65□□□□□ -0.22
BRCA1-209ENST00000470026 ZCWPW1Q9H0M4 648 aa13.65□□□□□ -0.22
BRCA1-209ENST00000470026 TFB2MQ9H5Q4 396 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms