RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 KIAA1161Q6NSJ0 714 aa14.8□□□□□ -0.04
COL9A3-209ENST00000469852 CCDC70Q6NSX1 233 aa14.8□□□□□ -0.04
COL9A3-209ENST00000469852 NEK5Q6P3R8 708 aa14.8□□□□□ -0.04
COL9A3-209ENST00000469852 PPP1R21Q6ZMI0 780 aa14.8□□□□□ -0.04
COL9A3-209ENST00000469852 LPCAT2Q7L5N7 544 aa14.8□□□□□ -0.04
COL9A3-209ENST00000469852 CAND1Q86VP6 1230 aaKnown RBP14.8□□□□□ -0.04
COL9A3-209ENST00000469852 PPIL6Q8IXY8 311 aa14.8□□□□□ -0.04
COL9A3-209ENST00000469852 NDUFAF2Q8N183 169 aa14.8□□□□□ -0.04
COL9A3-209ENST00000469852 CCHCR1Q8TD31 782 aa14.8□□□□□ -0.04
COL9A3-209ENST00000469852 SNX19Q92543 992 aa14.8□□□□□ -0.04
COL9A3-209ENST00000469852 LRRC45Q96CN5 670 aa14.8□□□□□ -0.04
COL9A3-209ENST00000469852 ZC3H10Q96K80 434 aaKnown RBP14.8□□□□□ -0.04
COL9A3-209ENST00000469852 COQ10AQ96MF6 247 aa14.8□□□□□ -0.04
COL9A3-209ENST00000469852 PWWP2AQ96N64 755 aa14.8□□□□□ -0.04
COL9A3-209ENST00000469852 MYOCQ99972 504 aa14.8□□□□□ -0.04
COL9A3-209ENST00000469852 C1QTNF2Q9BXJ5 285 aa14.8□□□□□ -0.04
COL9A3-209ENST00000469852 MAGEE1Q9HCI5 957 aa14.8□□□□□ -0.04
COL9A3-209ENST00000469852 CA5BQ9Y2D0 317 aa14.8□□□□□ -0.04
COL9A3-209ENST00000469852 ATXN2Q99700 1313 aaKnown RBP14.8□□□□□ -0.04
COL9A3-209ENST00000469852 PTPRZ1P23471 2315 aaPredicted RBP14.8□□□□□ -0.04
COL9A3-209ENST00000469852 RIF1Q5UIP0 2472 aaKnown RBP14.8□□□□□ -0.04
COL9A3-209ENST00000469852 ESYT3A0FGR9 886 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 MEI4A8MW99 385 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 BHMG1C9JSJ3 638 aaPredicted RBP14.79□□□□□ -0.04
COL9A3-209ENST00000469852 SLC31A1O15431 190 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 RECQL5O94762 991 aaPredicted RBP14.79□□□□□ -0.04
COL9A3-209ENST00000469852 SEC31AO94979 1220 aaKnown RBP14.79□□□□□ -0.04
COL9A3-209ENST00000469852 PAK4O96013 591 aaPredicted RBP14.79□□□□□ -0.04
COL9A3-209ENST00000469852 ITPKAP23677 461 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 ETV3P41162 512 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 TNNT3P45378 269 aaPredicted RBP14.79□□□□□ -0.04
COL9A3-209ENST00000469852 DHPSP49366 369 aaPredicted RBP14.79□□□□□ -0.04
COL9A3-209ENST00000469852 STC1P52823 247 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 ITGA8P53708 1063 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 BPTFQ12830 3046 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 CDH17Q12864 832 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 ARHGEF7Q14155 803 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 POU6F1Q14863 301 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 ACOX1Q15067 660 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 HIBCHQ6NVY1 386 aaPredicted RBP14.79□□□□□ -0.04
COL9A3-209ENST00000469852 Q6ZVL8 140 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 TMC3Q7Z5M5 1100 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 TECPR1Q7Z6L1 1165 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 LINC00523Q86TU6 105 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 PELI3Q8N2H9 469 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 AGGF1Q8N302 714 aaeCLIP14.79□□□□□ -0.04
COL9A3-209ENST00000469852 DNAAF3Q8N9W5 541 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 SNF8Q96H20 258 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 SLC17A9Q9BYT1 436 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 PCED1AQ9H1Q7 454 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 SPTBN4Q9H254 2564 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 EPC1Q9H2F5 836 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 ZFYVE1Q9HBF4 777 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 GRHL1Q9NZI5 618 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 EIF2B4Q9UI10 523 aaKnown RBP14.79□□□□□ -0.04
COL9A3-209ENST00000469852 DMGDHQ9UI17 866 aaKnown RBP14.79□□□□□ -0.04
COL9A3-209ENST00000469852 CD84Q9UIB8 345 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 ARL5AQ9Y689 179 aa14.79□□□□□ -0.04
COL9A3-209ENST00000469852 A0A1W2PPC4 97 aa14.78□□□□□ -0.04
COL9A3-209ENST00000469852 TM7SF2O76062 418 aa14.78□□□□□ -0.04
COL9A3-209ENST00000469852 ZNF30P17039 623 aa14.78□□□□□ -0.04
COL9A3-209ENST00000469852 SESN2P58004 480 aaPredicted RBP14.78□□□□□ -0.04
COL9A3-209ENST00000469852 CRADDP78560 199 aa14.78□□□□□ -0.04
COL9A3-209ENST00000469852 CDK16Q00536 496 aa14.78□□□□□ -0.04
COL9A3-209ENST00000469852 CCDC38Q502W7 563 aa14.78□□□□□ -0.04
COL9A3-209ENST00000469852 LYSMD4Q5XG99 296 aa14.78□□□□□ -0.04
COL9A3-209ENST00000469852 LRRC8BQ6P9F7 803 aa14.78□□□□□ -0.04
COL9A3-209ENST00000469852 ZC3H14Q6PJT7 736 aaKnown RBP14.78□□□□□ -0.04
COL9A3-209ENST00000469852 GLT6D1Q7Z4J2 308 aa14.78□□□□□ -0.04
COL9A3-209ENST00000469852 C11orf74Q86VG3 221 aa14.78□□□□□ -0.04
COL9A3-209ENST00000469852 MPP5Q8N3R9 675 aa14.78□□□□□ -0.04
COL9A3-209ENST00000469852 TP53I13Q8NBR0 393 aaPredicted RBP14.78□□□□□ -0.04
COL9A3-209ENST00000469852 C1orf216Q8TAB5 229 aa14.78□□□□□ -0.04
COL9A3-209ENST00000469852 SERPINB12Q96P63 405 aa14.78□□□□□ -0.04
COL9A3-209ENST00000469852 KLF6Q99612 283 aaPredicted RBP14.78□□□□□ -0.04
COL9A3-209ENST00000469852 GPR63Q9BZJ6 419 aa14.78□□□□□ -0.04
COL9A3-209ENST00000469852 BPIFA1Q9NP55 256 aa14.78□□□□□ -0.04
COL9A3-209ENST00000469852 RRAGDQ9NQL2 400 aaPredicted RBP14.78□□□□□ -0.04
COL9A3-209ENST00000469852 MBNL1Q9NR56 388 aaKnown RBP14.78□□□□□ -0.04
COL9A3-209ENST00000469852 TMEM74BQ9NUR3 256 aa14.78□□□□□ -0.04
COL9A3-209ENST00000469852 GPR179Q6PRD1 2367 aa14.78□□□□□ -0.04
COL9A3-209ENST00000469852 ZNF106Q9H2Y7 1883 aaKnown RBP14.78□□□□□ -0.04
COL9A3-209ENST00000469852 FAM186AA6NE01 2351 aa14.77□□□□□ -0.04
COL9A3-209ENST00000469852 FRYLO94915 3013 aa14.77□□□□□ -0.04
COL9A3-209ENST00000469852 CCDC78A2IDD5 438 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 H0Y8X5 98 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 LDB2O43679 373 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 LZTS3O60299 673 aaPredicted RBP14.77□□□□□ -0.05
COL9A3-209ENST00000469852 BANF1O75531 89 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 NFKBIAP25963 317 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 MGAT1P26572 445 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 IGFALSP35858 605 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 CLDN2P57739 230 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 CREB5Q02930 508 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 ELF2Q15723 593 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 WSCD2Q2TBF2 565 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 MSS51Q4VC12 460 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 LAYNQ6UX15 382 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 ZDHHC24Q6UX98 284 aa14.77□□□□□ -0.05
COL9A3-209ENST00000469852 HOOK3Q86VS8 718 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms