RNA–Protein interactions for RNA: ENST00000469744.1

MRPL28-208, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 1 (best)

Gene MRPL28, Length 1,467 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-208ENST00000469744 IL4RP24394 825 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 AIF1P55008 147 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 TPI1P60174 286 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 DYNLT1P63172 113 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 GUCY1A3Q02108 690 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 HNRNPDQ14103 355 aaKnown RBP17.75■□□□□ 0.43
MRPL28-208ENST00000469744 DPYSL2Q16555 572 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 KYNUQ16719 465 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 ERMARDQ5T6L9 678 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 C4orf22Q6V702 233 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 CENPUQ71F23 418 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 PARS2Q7L3T8 475 aaKnown RBP17.75■□□□□ 0.43
MRPL28-208ENST00000469744 GATAD2AQ86YP4 633 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 CHCHD4Q8N4Q1 142 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.75■□□□□ 0.43
MRPL28-208ENST00000469744 P3H4Q92791 437 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 PPP1R16AQ96I34 528 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 SNRNP25Q9BV90 132 aaKnown RBP17.75■□□□□ 0.43
MRPL28-208ENST00000469744 HDAC8Q9BY41 377 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 CATSPERBQ9H7T0 1116 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 LRRC4CQ9HCJ2 640 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 KLK13Q9UKR3 277 aa17.75■□□□□ 0.43
MRPL28-208ENST00000469744 ASPMQ8IZT6 3477 aa17.74■□□□□ 0.43
MRPL28-208ENST00000469744 A0A087WUV0 522 aaPredicted RBP17.74■□□□□ 0.43
MRPL28-208ENST00000469744 GOLGA8CPA6NN73 597 aa17.74■□□□□ 0.43
MRPL28-208ENST00000469744 TLR4O00206 839 aa17.74■□□□□ 0.43
MRPL28-208ENST00000469744 APOL1O14791 398 aa17.74■□□□□ 0.43
MRPL28-208ENST00000469744 ACSL3O95573 720 aa17.74■□□□□ 0.43
MRPL28-208ENST00000469744 ETS1P14921 441 aa17.74■□□□□ 0.43
MRPL28-208ENST00000469744 ITGB7P26010 798 aa17.74■□□□□ 0.43
MRPL28-208ENST00000469744 RPL22P35268 128 aaKnown RBP17.74■□□□□ 0.43
MRPL28-208ENST00000469744 NEK3P51956 506 aa17.74■□□□□ 0.43
MRPL28-208ENST00000469744 GEMIN4P57678 1058 aaKnown RBP17.74■□□□□ 0.43
MRPL28-208ENST00000469744 NXPH1P58417 271 aa17.74■□□□□ 0.43
MRPL28-208ENST00000469744 ZNF284Q2VY69 593 aa17.74■□□□□ 0.43
MRPL28-208ENST00000469744 SETMARQ53H47 684 aaPredicted RBP17.74■□□□□ 0.43
MRPL28-208ENST00000469744 ANKRD20A8PQ5CZ79 823 aa17.74■□□□□ 0.43
MRPL28-208ENST00000469744 SEL1L3Q68CR1 1132 aa17.74■□□□□ 0.43
MRPL28-208ENST00000469744 DBX2Q6ZNG2 339 aa17.74■□□□□ 0.43
MRPL28-208ENST00000469744 SPATS2Q86XZ4 545 aaKnown RBP17.74■□□□□ 0.43
MRPL28-208ENST00000469744 NAT8LQ8N9F0 302 aa17.74■□□□□ 0.43
MRPL28-208ENST00000469744 BCAS4Q8TDM0 211 aa17.74■□□□□ 0.43
MRPL28-208ENST00000469744 EPS8L3Q8TE67 593 aaKnown RBP17.74■□□□□ 0.43
MRPL28-208ENST00000469744 ISG20Q96AZ6 181 aaKnown RBP17.74■□□□□ 0.43
MRPL28-208ENST00000469744 SKA1Q96BD8 255 aa17.74■□□□□ 0.43
MRPL28-208ENST00000469744 RTP4Q96DX8 246 aa17.74■□□□□ 0.43
MRPL28-208ENST00000469744 CELF6Q96J87 481 aaKnown RBP17.74■□□□□ 0.43
MRPL28-208ENST00000469744 KCTD15Q96SI1 283 aaPredicted RBP17.74■□□□□ 0.43
MRPL28-208ENST00000469744 ELF4Q99607 663 aaPredicted RBP17.74■□□□□ 0.43
MRPL28-208ENST00000469744 RCOR3Q9P2K3 495 aaPredicted RBP17.74■□□□□ 0.43
MRPL28-208ENST00000469744 ZFR2Q9UPR6 939 aaKnown RBP17.74■□□□□ 0.43
MRPL28-208ENST00000469744 DMTF1Q9Y222 760 aa17.74■□□□□ 0.43
MRPL28-208ENST00000469744 A0A1B0GTQ1 180 aa17.73■□□□□ 0.43
MRPL28-208ENST00000469744 C1QTNF9BB2RNN3 333 aa17.73■□□□□ 0.43
MRPL28-208ENST00000469744 IFNB1P01574 187 aa17.73■□□□□ 0.43
MRPL28-208ENST00000469744 C1QTNF9P0C862 333 aa17.73■□□□□ 0.43
MRPL28-208ENST00000469744 ADRB3P13945 408 aa17.73■□□□□ 0.43
MRPL28-208ENST00000469744 PECAM1P16284 738 aaPredicted RBP17.73■□□□□ 0.43
MRPL28-208ENST00000469744 MMRN1Q13201 1228 aa17.73■□□□□ 0.43
MRPL28-208ENST00000469744 XRCC4Q13426 336 aa17.73■□□□□ 0.43
MRPL28-208ENST00000469744 SUZ12Q15022 739 aaKnown RBP17.73■□□□□ 0.43
MRPL28-208ENST00000469744 RASA2Q15283 850 aa17.73■□□□□ 0.43
MRPL28-208ENST00000469744 SHBQ15464 509 aa17.73■□□□□ 0.43
MRPL28-208ENST00000469744 SLC45A4Q5BKX6 768 aa17.73■□□□□ 0.43
MRPL28-208ENST00000469744 UBAP2Q5T6F2 1119 aaKnown RBP17.73■□□□□ 0.43
MRPL28-208ENST00000469744 FBXL19Q6PCT2 694 aa17.73■□□□□ 0.43
MRPL28-208ENST00000469744 PRUNE1Q86TP1 453 aa17.73■□□□□ 0.43
MRPL28-208ENST00000469744 SLCO6A1Q86UG4 719 aa17.73■□□□□ 0.43
MRPL28-208ENST00000469744 HORMAD1Q86X24 394 aa17.73■□□□□ 0.43
MRPL28-208ENST00000469744 TDRPQ86YL5 185 aa17.73■□□□□ 0.43
MRPL28-208ENST00000469744 PLD5Q8N7P1 536 aa17.73■□□□□ 0.43
MRPL28-208ENST00000469744 OR2AP1Q8NGE2 309 aa17.73■□□□□ 0.43
MRPL28-208ENST00000469744 BAHD1Q8TBE0 780 aaPredicted RBP17.73■□□□□ 0.43
MRPL28-208ENST00000469744 VOPP1Q96AW1 172 aa17.73■□□□□ 0.43
MRPL28-208ENST00000469744 SAYSD1Q9NPB0 183 aa17.73■□□□□ 0.43
MRPL28-208ENST00000469744 ACTL7BQ9Y614 415 aa17.73■□□□□ 0.43
MRPL28-208ENST00000469744 WASH4PA8MWX3 477 aa17.72■□□□□ 0.43
MRPL28-208ENST00000469744 E7ESA3 106 aa17.72■□□□□ 0.43
MRPL28-208ENST00000469744 EEF2KO00418 725 aaKnown RBP17.72■□□□□ 0.43
MRPL28-208ENST00000469744 FGF10O15520 208 aaPredicted RBP17.72■□□□□ 0.43
MRPL28-208ENST00000469744 PCDHGA12O60330 932 aa17.72■□□□□ 0.43
MRPL28-208ENST00000469744 CDH16O75309 829 aa17.72■□□□□ 0.43
MRPL28-208ENST00000469744 UGT2B4P06133 528 aa17.72■□□□□ 0.43
MRPL28-208ENST00000469744 ATXN1LP0C7T5 689 aaKnown RBP17.72■□□□□ 0.43
MRPL28-208ENST00000469744 NR2C2P49116 596 aa17.72■□□□□ 0.43
MRPL28-208ENST00000469744 ARL4CP56559 192 aa17.72■□□□□ 0.43
MRPL28-208ENST00000469744 SNRPD1P62314 119 aaKnown RBP17.72■□□□□ 0.43
MRPL28-208ENST00000469744 CCDC15Q0P6D6 951 aa17.72■□□□□ 0.43
MRPL28-208ENST00000469744 SERINC3Q13530 473 aa17.72■□□□□ 0.43
MRPL28-208ENST00000469744 PPP6R3Q5H9R7 873 aaPredicted RBP17.72■□□□□ 0.43
MRPL28-208ENST00000469744 LRRC73Q5JTD7 316 aa17.72■□□□□ 0.43
MRPL28-208ENST00000469744 DARS2Q6PI48 645 aaKnown RBP17.72■□□□□ 0.43
MRPL28-208ENST00000469744 UMODL1-AS1Q8N2C9 162 aa17.72■□□□□ 0.43
MRPL28-208ENST00000469744 PQLC3Q8N755 202 aa17.72■□□□□ 0.43
MRPL28-208ENST00000469744 MFSD2AQ8NA29 543 aa17.72■□□□□ 0.43
MRPL28-208ENST00000469744 EXOC2Q96KP1 924 aa17.72■□□□□ 0.43
MRPL28-208ENST00000469744 FRMD8Q9BZ67 464 aaPredicted RBP17.72■□□□□ 0.43
MRPL28-208ENST00000469744 PAK5Q9P286 719 aa17.72■□□□□ 0.43
MRPL28-208ENST00000469744 SAE1Q9UBE0 346 aaPredicted RBP17.72■□□□□ 0.43
MRPL28-208ENST00000469744 FETUBQ9UGM5 382 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms