RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 SLC17A6Q9P2U8 582 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 NDUFAF1Q9Y375 327 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 TCRBV5S2A0A599 114 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 PABPN1LA6NDY0 278 aaKnown RBP9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 C12orf71A8MTZ7 269 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 H0YCG3 227 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 TPST1O60507 370 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 SOAT2O75908 522 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 METTL18O95568 372 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 CAPN1P07384 714 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 OXTRP30559 389 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 HOXA13P31271 388 aaPredicted RBP9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 SHMT1P34896 483 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 HTR2BP41595 481 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 TPD52P55327 224 aaPredicted RBP9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 GPLD1P80108 840 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 MVKQ03426 396 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 IL18R1Q13478 541 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 CYP51A1Q16850 503 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 HSDL1Q3SXM5 330 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 ZNF404Q494X3 552 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 COQ5Q5HYK3 327 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 STRADAQ7RTN6 431 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 PIWIL4Q7Z3Z4 852 aaKnown RBP9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 OSTM1Q86WC4 334 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 CADM2Q8N3J6 435 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 SETD6Q8TBK2 473 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 SPPL2BQ8TCT7 592 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 BRSK1Q8TDC3 778 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 STYXQ8WUJ0 223 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 FAR1Q8WVX9 515 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 SEPT1Q8WYJ6 367 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 OMA1Q96E52 524 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 RNF170Q96K19 258 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 ZFYVE19Q96K21 471 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 CEP19Q96LK0 163 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 APOL4Q9BPW4 351 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 FAM213AQ9BRX8 229 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 NTPCRQ9BSD7 190 aaKnown RBP9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 FAM49AQ9H0Q0 323 aaPredicted RBP9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 LHX5Q9H2C1 402 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 LIN7BQ9HAP6 207 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 KMT5AQ9NQR1 393 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 ABI2Q9NYB9 513 aaPredicted RBP9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 SEPT10Q9P0V9 454 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 PCSK1NQ9UHG2 260 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 STAP1Q9ULZ2 295 aa9.04□□□□□ -0.96
SMARCE1-207ENST00000469334 PNMA8CA0A1B0GUJ8 204 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 HMX3A6NHT5 357 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 CLDN24A6NM45 220 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 UBXN8O00124 270 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 CAPN5O15484 640 aaPredicted RBP9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 INMTO95050 263 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 PRSS23O95084 383 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 C2P06681 752 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 NPTX2P47972 431 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 SLC9A3P48764 834 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 LIG4P49917 911 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 NAGLUP54802 743 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 FAM182AQ5T1J6 154 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 SYT6Q5T7P8 510 aaPredicted RBP9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 FAM205BPQ63HN1 556 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 BEND5Q7L4P6 421 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 GDPD3Q7L5L3 318 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 ZNF438Q7Z4V0 828 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 ZBTB33Q86T24 672 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 NOXA1Q86UR1 476 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 PIGZQ86VD9 579 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 LIX1LQ8IVB5 337 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 KIAA0319LQ8IZA0 1049 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 PQLC3Q8N755 202 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 GALNT11Q8NCW6 608 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 LILRB1Q8NHL6 650 aaPredicted RBP9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 CDHR1Q96JP9 859 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 CGRRF1Q99675 332 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 CNPY3Q9BT09 278 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 ACAT2Q9BWD1 397 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 IDI2Q9BXS1 227 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 KCNN2Q9H2S1 579 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 SOX17Q9H6I2 414 aaPredicted RBP9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 KAT8Q9H7Z6 458 aaKnown RBP9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 TRIM39Q9HCM9 518 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 PRDM11Q9NQV5 511 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 PAQR5Q9NXK6 330 aaPredicted RBP9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 CCDC167Q9P0B6 97 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 DNMT3LQ9UJW3 386 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 MKLN1Q9UL63 735 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 VANGL2Q9ULK5 521 aa9.03□□□□□ -0.96
SMARCE1-207ENST00000469334 CCDC154A6NI56 674 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 METTL15A6NJ78 407 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 LOC110117498-PIK3R3F6TDL0 507 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 SLC1A7O00341 560 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 HNRNPDLO14979 420 aaKnown RBP9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 MED26O95402 600 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 ALPLP05186 524 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 PGK2P07205 417 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 ASNSP08243 561 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 IL7P13232 177 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 IL7RP16871 459 aa9.02□□□□□ -0.96
SMARCE1-207ENST00000469334 CYP2A7P20853 494 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms