RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 ARRDC3Q96B67 414 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 SKA1Q96BD8 255 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 BIRC7Q96CA5 298 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 TRIM44Q96DX7 344 aaPredicted RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 IFT43Q96FT9 208 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 FEM1CQ96JP0 617 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 TBATAQ96M53 351 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 HSPA12BQ96MM6 686 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 KLHL32Q96NJ5 620 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 LENG8Q96PV6 779 aaPredicted RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 TRIB3Q96RU7 358 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 WDR24Q96S15 920 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 OSBPL9Q96SU4 736 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 NAPGQ99747 312 aaPredicted RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 SEMA3CQ99985 751 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 ORAI3Q9BRQ5 295 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 HERPUD2Q9BSE4 406 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 C1QTNF7Q9BXJ2 289 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 HEMGNQ9BXL5 484 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 TPSD1Q9BZJ3 242 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 TRABDQ9H4I3 376 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 MTG2Q9H4K7 406 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 ZDHHC6Q9H6R6 413 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 ARNT2Q9HBZ2 717 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 GLOD4Q9HC38 313 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 MAGEE1Q9HCI5 957 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 EIF2B3Q9NR50 452 aaKnown RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 GPR27Q9NS67 375 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 RAD18Q9NS91 495 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 POLR3BQ9NW08 1133 aaPredicted RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 TRMT1Q9NXH9 659 aaKnown RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 NOP53Q9NZM5 478 aaKnown RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 HACD3Q9P035 362 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 KLHL8Q9P2G9 620 aaPredicted RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 NFKBIL1Q9UBC1 381 aaPredicted RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 SAE1Q9UBE0 346 aaPredicted RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 SERGEFQ9UGK8 458 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 FAM153AQ9UHL3 310 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 MBD1Q9UIS9 605 aaPredicted RBP3.54□□□□□ -1.84
TRIM59-202ENST00000468542 GMEB2Q9UKD1 530 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 PILRBQ9UKJ0 227 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 PHTF1Q9UMS5 762 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 CYP8B1Q9UNU6 501 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 ACTL7AQ9Y615 435 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 SAR1BQ9Y6B6 198 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 SDK1Q7Z5N4 2213 aa3.54□□□□□ -1.84
TRIM59-202ENST00000468542 ZFHX4Q86UP3 3567 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 PLXNB3Q9ULL4 1909 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 TBC1D3DA0A087WVF3 549 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 TBC1D3IA0A087WXS9 549 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 TBC1D3EA0A087X179 549 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 TBC1D3KA0A087X1G2 549 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 A0A0J9YYE9 177 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 A0A1B0GTW7 788 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 TCRBV7S2A1N4TA0A589 114 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 TBC1D3FA6NER0 549 aaPredicted RBP3.53□□□□□ -1.84
TRIM59-202ENST00000468542 PRR23AA6NEV1 266 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 MEI4A8MW99 385 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 ANKRD66B4E2M5 251 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 GPR89AB7ZAQ6 455 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 TBC1D3LB9A6J9 549 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 H7C0C1 242 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 PDE2AO00408 941 aaPredicted RBP3.53□□□□□ -1.84
TRIM59-202ENST00000468542 NEMP1O14524 444 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 ENC1O14682 589 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 GNB5O14775 395 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 NDC80O14777 642 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 VILLO15195 856 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 BCAT2O15382 392 aaPredicted RBP3.53□□□□□ -1.84
TRIM59-202ENST00000468542 YKT6O15498 198 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 KCNN4O15554 427 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 BNIP3LO60238 219 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 CEP104O60308 925 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 TM7SF2O76062 418 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 SUN1O94901 812 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 HEXIM1O94992 359 aaKnown RBP3.53□□□□□ -1.84
TRIM59-202ENST00000468542 PIGNO95427 931 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 AP2A1O95782 977 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 NDST3O95803 873 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 GAS8O95995 478 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 CPP00450 1065 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 TRBC1P01850 177 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 ATP1A1P05023 1023 aaKnown RBP3.53□□□□□ -1.84
TRIM59-202ENST00000468542 FGF1P05230 155 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 MMP2P08253 660 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 HOXC4P09017 264 aaPredicted RBP3.53□□□□□ -1.84
TRIM59-202ENST00000468542 ELFN1P0C7U0 828 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 TBC1D3HP0C7X1 549 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 ZNF806P0C7X5 589 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 GPR89BP0CG08 455 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 ZNF883P0CG24 379 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 CYP2A6P11509 494 aaPredicted RBP3.53□□□□□ -1.84
TRIM59-202ENST00000468542 NFKB1P19838 968 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 SDHBP21912 280 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 BCKDHBP21953 392 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 HNRNPA2B1P22626 353 aaKnown RBP3.53□□□□□ -1.84
TRIM59-202ENST00000468542 XPAP23025 273 aaPredicted RBP3.53□□□□□ -1.84
TRIM59-202ENST00000468542 PSMA3P25788 255 aa3.53□□□□□ -1.84
TRIM59-202ENST00000468542 RBL1P28749 1068 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms