RNA–Protein interactions for RNA: ENST00000468371.5

SHQ1-205, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 1 (best)

Gene SHQ1, Length 4,024 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-205ENST00000468371 RPS6KA2Q15349 733 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 FSTL4Q6MZW2 842 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 CLNKQ7Z7G1 428 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.02□□□□□ -1.45
SHQ1-205ENST00000468371 NETO1Q8TDF5 533 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 KLHDC7BQ96G42 594 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 KREMEN1Q96MU8 473 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 MECRQ9BV79 373 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 LRMDAQ9H2I8 198 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 MRPL46Q9H2W6 279 aaKnown RBP6.02□□□□□ -1.45
SHQ1-205ENST00000468371 LRRC19Q9H756 370 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 HPS4Q9NQG7 708 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 MPP6Q9NZW5 540 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 HECAQ9UBI9 543 aaPredicted RBP6.02□□□□□ -1.45
SHQ1-205ENST00000468371 SCML1Q9UN30 329 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 FRMPD3Q5JV73 1810 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 CACNA1EQ15878 2313 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 GOLGA8QA0A0J9YX86 632 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 GOLGA8OA6NCC3 632 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 GOLGA8NF8WBI6 632 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 CRCPO75575 148 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 CASP2P42575 452 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 ARL4DP49703 201 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 TAS2R40P59535 323 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 BCL2L1Q07817 233 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 ZNF234Q14588 700 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 SLC25A52Q3SY17 297 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 ANKRD20A4Q4UJ75 823 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 PITRM1Q5JRX3 1037 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 SLC26A9Q7LBE3 791 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 TTC30BQ8N4P2 665 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 FAM160A2Q8N612 972 aaPredicted RBP6.02□□□□□ -1.45
SHQ1-205ENST00000468371 CXorf38Q8TB03 319 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 SLC35F5Q8WV83 523 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 CPXM1Q96SM3 734 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 TBCBQ99426 244 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 HEPHQ9BQS7 1158 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 CAAP1Q9H8G2 361 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 TLK1Q9UKI8 766 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 DTNAQ9Y4J8 743 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 A0A1W2PP55 124 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 WASH3PC4AMC7 463 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 FPGTO14772 594 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 GSC2O15499 205 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 HOXC11O43248 304 aaPredicted RBP6.02□□□□□ -1.45
SHQ1-205ENST00000468371 PAPSS1O43252 624 aaPredicted RBP6.02□□□□□ -1.45
SHQ1-205ENST00000468371 KELP23276 732 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 RPIAP49247 311 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 COPAP53621 1224 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 JAM2P57087 298 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 CLDN10P78369 228 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 CDK16Q00536 496 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 TFDP2Q14188 446 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 PIGHQ14442 188 aaPredicted RBP6.02□□□□□ -1.45
SHQ1-205ENST00000468371 CWF19L1Q69YN2 538 aaKnown RBP6.02□□□□□ -1.45
SHQ1-205ENST00000468371 SPOCD1Q6ZMY3 1216 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 CIR1Q86X95 450 aaPredicted RBP6.02□□□□□ -1.45
SHQ1-205ENST00000468371 DEFB107AQ8IZN7 70 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 CLEC4CQ8WTT0 213 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 KLK6Q92876 244 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 AGAP3Q96P47 875 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 FOXP3Q9BZS1 431 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 CSNK1G1Q9HCP0 422 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 AP4E1Q9UPM8 1137 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 DNAJC16Q9Y2G8 782 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 PCDHGA5Q9Y5G8 931 aa6.02□□□□□ -1.45
SHQ1-205ENST00000468371 ARHGAP10A1A4S6 786 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 E9PBE3 544 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 CACNG3O60359 315 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 KLHL41O60662 606 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 PEX11AO75192 247 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 SERPINB5P36952 375 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 GPD2P43304 727 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 ELAVL3Q14576 367 aaKnown RBP6.01□□□□□ -1.45
SHQ1-205ENST00000468371 MORF4L2Q15014 288 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 ACOX1Q15067 660 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 RSPO4Q2I0M5 234 aaPredicted RBP6.01□□□□□ -1.45
SHQ1-205ENST00000468371 PARP6Q2NL67 630 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 FSCBQ5H9T9 825 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 MS4A13Q5J8X5 152 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 SYPL2Q5VXT5 272 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 C16orf46Q6P387 395 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 LINGO4Q6UY18 593 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 RIPOR1Q6ZS17 1223 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 TRIM48Q8IWZ4 208 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 ZMIZ2Q8NF64 920 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 EXD1Q8NHP7 514 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 EME1Q96AY2 570 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 LOXL4Q96JB6 756 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 ANKRD27Q96NW4 1050 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 GORASP1Q9BQQ3 440 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 DNAJC28Q9NX36 388 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 DDX56Q9NY93 547 aaKnown RBP6.01□□□□□ -1.45
SHQ1-205ENST00000468371 TAGLN3Q9UI15 199 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 SPTA1P02549 2419 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 CACNA1BQ00975 2339 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 PMM2O15305 246 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 PSTPIP1O43586 416 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 PEX1O43933 1283 aa6.01□□□□□ -1.45
SHQ1-205ENST00000468371 POP4O95707 220 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms