RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 EPHB1P54762 984 aa16.97■□□□□ 0.31
EXOSC3-203ENST00000465229 POLR2LP62875 67 aaKnown RBP16.97■□□□□ 0.31
EXOSC3-203ENST00000465229 ZBTB16Q05516 673 aa16.97■□□□□ 0.31
EXOSC3-203ENST00000465229 CDH17Q12864 832 aa16.97■□□□□ 0.31
EXOSC3-203ENST00000465229 MSLNQ13421 630 aaPredicted RBP16.97■□□□□ 0.31
EXOSC3-203ENST00000465229 MTM1Q13496 603 aa16.97■□□□□ 0.31
EXOSC3-203ENST00000465229 PTPRRQ15256 657 aa16.97■□□□□ 0.31
EXOSC3-203ENST00000465229 UGP2Q16851 508 aa16.97■□□□□ 0.31
EXOSC3-203ENST00000465229 LRRC8BQ6P9F7 803 aa16.97■□□□□ 0.31
EXOSC3-203ENST00000465229 PARS2Q7L3T8 475 aaKnown RBP16.97■□□□□ 0.31
EXOSC3-203ENST00000465229 TTC7BQ86TV6 843 aa16.97■□□□□ 0.31
EXOSC3-203ENST00000465229 IGDCC3Q8IVU1 814 aa16.97■□□□□ 0.31
EXOSC3-203ENST00000465229 AADATQ8N5Z0 425 aa16.97■□□□□ 0.31
EXOSC3-203ENST00000465229 HMGB4Q8WW32 186 aa16.97■□□□□ 0.31
EXOSC3-203ENST00000465229 PBXIP1Q96AQ6 731 aa16.97■□□□□ 0.31
EXOSC3-203ENST00000465229 PPP1R16AQ96I34 528 aa16.97■□□□□ 0.31
EXOSC3-203ENST00000465229 IER2Q9BTL4 223 aa16.97■□□□□ 0.31
EXOSC3-203ENST00000465229 HDAC8Q9BY41 377 aa16.97■□□□□ 0.31
EXOSC3-203ENST00000465229 EPHX3Q9H6B9 360 aa16.97■□□□□ 0.31
EXOSC3-203ENST00000465229 SMG5Q9UPR3 1016 aaKnown RBP16.97■□□□□ 0.31
EXOSC3-203ENST00000465229 CHMP2BQ9UQN3 213 aa16.97■□□□□ 0.31
EXOSC3-203ENST00000465229 PPIL1Q9Y3C6 166 aa16.97■□□□□ 0.31
EXOSC3-203ENST00000465229 CACNA1IQ9P0X4 2223 aa16.97■□□□□ 0.31
EXOSC3-203ENST00000465229 ANKRD36A6QL64 1941 aa16.97■□□□□ 0.31
EXOSC3-203ENST00000465229 ATXN2Q99700 1313 aaKnown RBP16.97■□□□□ 0.31
EXOSC3-203ENST00000465229 A0A0J9YYE9 177 aa16.96■□□□□ 0.31
EXOSC3-203ENST00000465229 TRBC1P01850 177 aa16.96■□□□□ 0.31
EXOSC3-203ENST00000465229 PRKCGP05129 697 aa16.96■□□□□ 0.31
EXOSC3-203ENST00000465229 FGF1P05230 155 aa16.96■□□□□ 0.31
EXOSC3-203ENST00000465229 CXCL12P48061 93 aa16.96■□□□□ 0.31
EXOSC3-203ENST00000465229 CNTN1Q12860 1018 aa16.96■□□□□ 0.31
EXOSC3-203ENST00000465229 LRRC73Q5JTD7 316 aa16.96■□□□□ 0.31
EXOSC3-203ENST00000465229 ERN2Q76MJ5 926 aaKnown RBP16.96■□□□□ 0.31
EXOSC3-203ENST00000465229 SRRM1Q8IYB3 904 aaKnown RBP16.96■□□□□ 0.31
EXOSC3-203ENST00000465229 DNAAF3Q8N9W5 541 aa16.96■□□□□ 0.31
EXOSC3-203ENST00000465229 TSTD1Q8NFU3 115 aa16.96■□□□□ 0.31
EXOSC3-203ENST00000465229 SGSM3Q96HU1 749 aa16.96■□□□□ 0.31
EXOSC3-203ENST00000465229 HHIPQ96QV1 700 aa16.96■□□□□ 0.31
EXOSC3-203ENST00000465229 DYRK4Q9NR20 520 aa16.96■□□□□ 0.31
EXOSC3-203ENST00000465229 SERGEFQ9UGK8 458 aa16.96■□□□□ 0.31
EXOSC3-203ENST00000465229 UPK3BL1B0FP48 263 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 UPK3BL2E5RIL1 263 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 DNTTP04053 509 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 ALPIP09923 528 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 PIRTP0C851 137 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 CREB1P16220 341 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 CTPS1P17812 591 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 DRD4P21917 467 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 P2RY2P41231 377 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 MSH2P43246 934 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 GRIA4P48058 902 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 SESN2P58004 480 aaPredicted RBP16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 CERCAMQ5T4B2 595 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 ANO7Q6IWH7 933 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 FBXL19Q6PCT2 694 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 KIAA1324Q6UXG2 1013 aaKnown RBP16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 CAPN12Q6ZSI9 719 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 MICALCLQ6ZW33 695 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 CYS1Q717R9 158 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 CNPY4Q8N129 248 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 HDDC3Q8N4P3 179 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 SCRN2Q96FV2 425 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 SIGLEC10Q96LC7 697 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 MCCC1Q96RQ3 725 aaPredicted RBP16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 PAFAH2Q99487 392 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 FAM107BQ9H098 131 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 TRABDQ9H4I3 376 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 KCNK9Q9NPC2 374 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 FBXL12Q9NXK8 326 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 NKIRAS1Q9NYS0 192 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 SCML1Q9UN30 329 aa16.96■□□□□ 0.3
EXOSC3-203ENST00000465229 CUL9Q8IWT3 2517 aa16.95■□□□□ 0.3
EXOSC3-203ENST00000465229 A0A1W2PP55 124 aa16.95■□□□□ 0.3
EXOSC3-203ENST00000465229 TCRBV9S1A1TA0A576 114 aa16.95■□□□□ 0.3
EXOSC3-203ENST00000465229 FAM47DPA6NHR8 397 aa16.95■□□□□ 0.3
EXOSC3-203ENST00000465229 ALDH1A2O94788 518 aa16.95■□□□□ 0.3
EXOSC3-203ENST00000465229 ADRB3P13945 408 aa16.95■□□□□ 0.3
EXOSC3-203ENST00000465229 HNF1BP35680 557 aa16.95■□□□□ 0.3
EXOSC3-203ENST00000465229 NEK3P51956 506 aa16.95■□□□□ 0.3
EXOSC3-203ENST00000465229 PIP5KL1Q5T9C9 394 aa16.95■□□□□ 0.3
EXOSC3-203ENST00000465229 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.95■□□□□ 0.3
EXOSC3-203ENST00000465229 BMP8AQ7Z5Y6 402 aa16.95■□□□□ 0.3
EXOSC3-203ENST00000465229 AGGF1Q8N302 714 aaeCLIP16.95■□□□□ 0.3
EXOSC3-203ENST00000465229 MDGA1Q8NFP4 955 aa16.95■□□□□ 0.3
EXOSC3-203ENST00000465229 DCAKDQ8WVC6 231 aa16.95■□□□□ 0.3
EXOSC3-203ENST00000465229 SLC44A1Q8WWI5 657 aa16.95■□□□□ 0.3
EXOSC3-203ENST00000465229 SMC6Q96SB8 1091 aa16.95■□□□□ 0.3
EXOSC3-203ENST00000465229 OMDQ99983 421 aa16.95■□□□□ 0.3
EXOSC3-203ENST00000465229 PCDH12Q9NPG4 1184 aa16.95■□□□□ 0.3
EXOSC3-203ENST00000465229 ZC3H7BQ9UGR2 993 aaKnown RBP16.95■□□□□ 0.3
EXOSC3-203ENST00000465229 EBF1Q9UH73 591 aa16.95■□□□□ 0.3
EXOSC3-203ENST00000465229 SPO11Q9Y5K1 396 aa16.95■□□□□ 0.3
EXOSC3-203ENST00000465229 AP3B1O00203 1094 aa16.94■□□□□ 0.3
EXOSC3-203ENST00000465229 TNFRSF10AO00220 468 aa16.94■□□□□ 0.3
EXOSC3-203ENST00000465229 RNASEH2AO75792 299 aaKnown RBP16.94■□□□□ 0.3
EXOSC3-203ENST00000465229 FAM155BO75949 473 aa16.94■□□□□ 0.3
EXOSC3-203ENST00000465229 APBB3O95704 486 aa16.94■□□□□ 0.3
EXOSC3-203ENST00000465229 C1QAP02745 245 aa16.94■□□□□ 0.3
EXOSC3-203ENST00000465229 ACADMP11310 421 aa16.94■□□□□ 0.3
EXOSC3-203ENST00000465229 KRT15P19012 456 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms