RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 GPR34Q9UPC5 381 aa25.89■■□□□ 1.74
U2AF1-206ENST00000464750 PSMD11O00231 422 aa25.88■■□□□ 1.73
U2AF1-206ENST00000464750 USP12O75317 370 aa25.88■■□□□ 1.73
U2AF1-206ENST00000464750 MX2P20592 715 aa25.88■■□□□ 1.73
U2AF1-206ENST00000464750 KDELR1P24390 212 aa25.88■■□□□ 1.73
U2AF1-206ENST00000464750 CCNCP24863 283 aa25.88■■□□□ 1.73
U2AF1-206ENST00000464750 ETV3P41162 512 aa25.88■■□□□ 1.73
U2AF1-206ENST00000464750 DSC2Q02487 901 aa25.88■■□□□ 1.73
U2AF1-206ENST00000464750 ARHGEF7Q14155 803 aa25.88■■□□□ 1.73
U2AF1-206ENST00000464750 ALG1LQ6GMV1 187 aa25.88■■□□□ 1.73
U2AF1-206ENST00000464750 HSD11B1LQ7Z5J1 315 aa25.88■■□□□ 1.73
U2AF1-206ENST00000464750 TSPAN33Q86UF1 283 aa25.88■■□□□ 1.73
U2AF1-206ENST00000464750 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.88■■□□□ 1.73
U2AF1-206ENST00000464750 LRRN4Q8WUT4 740 aa25.88■■□□□ 1.73
U2AF1-206ENST00000464750 PIH1D2Q8WWB5 315 aa25.88■■□□□ 1.73
U2AF1-206ENST00000464750 RAPGEF5Q92565 580 aa25.88■■□□□ 1.73
U2AF1-206ENST00000464750 FATE1Q969F0 183 aa25.88■■□□□ 1.73
U2AF1-206ENST00000464750 TSGA13Q96PP4 275 aa25.88■■□□□ 1.73
U2AF1-206ENST00000464750 CCDC3Q9BQI4 270 aa25.88■■□□□ 1.73
U2AF1-206ENST00000464750 RBM22Q9NW64 420 aaKnown RBP eCLIP25.88■■□□□ 1.73
U2AF1-206ENST00000464750 KCTD5Q9NXV2 234 aa25.88■■□□□ 1.73
U2AF1-206ENST00000464750 NBEAQ8NFP9 2946 aa25.87■■□□□ 1.73
U2AF1-206ENST00000464750 LRRD1A4D1F6 860 aa25.87■■□□□ 1.73
U2AF1-206ENST00000464750 FZD6O60353 706 aa25.87■■□□□ 1.73
U2AF1-206ENST00000464750 MPOP05164 745 aa25.87■■□□□ 1.73
U2AF1-206ENST00000464750 PDHA1P08559 390 aa25.87■■□□□ 1.73
U2AF1-206ENST00000464750 MYCLP1P12525 358 aaPredicted RBP25.87■■□□□ 1.73
U2AF1-206ENST00000464750 GABREP78334 506 aa25.87■■□□□ 1.73
U2AF1-206ENST00000464750 ISXQ2M1V0 245 aa25.87■■□□□ 1.73
U2AF1-206ENST00000464750 RBM44Q6ZP01 1051 aaKnown RBP25.87■■□□□ 1.73
U2AF1-206ENST00000464750 PDZD3Q86UT5 571 aa25.87■■□□□ 1.73
U2AF1-206ENST00000464750 HEATR4Q86WZ0 1026 aa25.87■■□□□ 1.73
U2AF1-206ENST00000464750 CNGA4Q8IV77 575 aa25.87■■□□□ 1.73
U2AF1-206ENST00000464750 SNIP1Q8TAD8 396 aaKnown RBP25.87■■□□□ 1.73
U2AF1-206ENST00000464750 SYNDIG1Q9H7V2 258 aa25.87■■□□□ 1.73
U2AF1-206ENST00000464750 HAUS2Q9NVX0 235 aa25.87■■□□□ 1.73
U2AF1-206ENST00000464750 AMACRQ9UHK6 382 aa25.87■■□□□ 1.73
U2AF1-206ENST00000464750 MOSPD1Q9UJG1 213 aa25.87■■□□□ 1.73
U2AF1-206ENST00000464750 PPIL1Q9Y3C6 166 aa25.87■■□□□ 1.73
U2AF1-206ENST00000464750 ARHGEF17Q96PE2 2063 aaPredicted RBP25.86■■□□□ 1.73
U2AF1-206ENST00000464750 PDE2AO00408 941 aaPredicted RBP25.86■■□□□ 1.73
U2AF1-206ENST00000464750 TNFRSF10CO14798 259 aa25.86■■□□□ 1.73
U2AF1-206ENST00000464750 HLA-DQB2P05538 268 aa25.86■■□□□ 1.73
U2AF1-206ENST00000464750 ACTN2P35609 894 aa25.86■■□□□ 1.73
U2AF1-206ENST00000464750 EIF2S3P41091 472 aaKnown RBP25.86■■□□□ 1.73
U2AF1-206ENST00000464750 ABCG1P45844 678 aa25.86■■□□□ 1.73
U2AF1-206ENST00000464750 KIF26BQ2KJY2 2108 aa25.86■■□□□ 1.73
U2AF1-206ENST00000464750 TBC1D25Q3MII6 688 aa25.86■■□□□ 1.73
U2AF1-206ENST00000464750 RHOT2Q8IXI1 618 aa25.86■■□□□ 1.73
U2AF1-206ENST00000464750 NDUFAF2Q8N183 169 aa25.86■■□□□ 1.73
U2AF1-206ENST00000464750 CBARPQ8N350 705 aaPredicted RBP25.86■■□□□ 1.73
U2AF1-206ENST00000464750 HDAC11Q96DB2 347 aa25.86■■□□□ 1.73
U2AF1-206ENST00000464750 ZNF830Q96NB3 372 aaPredicted RBP25.86■■□□□ 1.73
U2AF1-206ENST00000464750 RNF157Q96PX1 679 aa25.86■■□□□ 1.73
U2AF1-206ENST00000464750 TDRD1Q9BXT4 1180 aaKnown RBP25.86■■□□□ 1.73
U2AF1-206ENST00000464750 CYP4F12Q9HCS2 524 aa25.86■■□□□ 1.73
U2AF1-206ENST00000464750 PHPT1Q9NRX4 125 aaPredicted RBP25.86■■□□□ 1.73
U2AF1-206ENST00000464750 DTLQ9NZJ0 730 aa25.86■■□□□ 1.73
U2AF1-206ENST00000464750 PRSS38A1L453 326 aa25.85■■□□□ 1.73
U2AF1-206ENST00000464750 GOLGA6CA6NDK9 693 aa25.85■■□□□ 1.73
U2AF1-206ENST00000464750 GOLGA6BA6NDN3 693 aa25.85■■□□□ 1.73
U2AF1-206ENST00000464750 CASC3O15234 703 aaKnown RBP25.85■■□□□ 1.73
U2AF1-206ENST00000464750 TCEA3O75764 348 aa25.85■■□□□ 1.73
U2AF1-206ENST00000464750 MTA2O94776 668 aa25.85■■□□□ 1.73
U2AF1-206ENST00000464750 GOLGA6DP0CG33 693 aa25.85■■□□□ 1.73
U2AF1-206ENST00000464750 KRT10P13645 584 aa25.85■■□□□ 1.73
U2AF1-206ENST00000464750 CCNB1P14635 433 aa25.85■■□□□ 1.73
U2AF1-206ENST00000464750 ARHGAP25P42331 645 aa25.85■■□□□ 1.73
U2AF1-206ENST00000464750 SLC10A2Q12908 348 aaPredicted RBP25.85■■□□□ 1.73
U2AF1-206ENST00000464750 IHHQ14623 411 aa25.85■■□□□ 1.73
U2AF1-206ENST00000464750 RAET1GQ6H3X3 334 aa25.85■■□□□ 1.73
U2AF1-206ENST00000464750 Q6ZVL8 140 aa25.85■■□□□ 1.73
U2AF1-206ENST00000464750 TAF8Q7Z7C8 310 aa25.85■■□□□ 1.73
U2AF1-206ENST00000464750 CCDC13Q8IYE1 715 aa25.85■■□□□ 1.73
U2AF1-206ENST00000464750 CCNYQ8ND76 341 aa25.85■■□□□ 1.73
U2AF1-206ENST00000464750 WDR48Q8TAF3 677 aa25.85■■□□□ 1.73
U2AF1-206ENST00000464750 FGF11Q92914 225 aa25.85■■□□□ 1.73
U2AF1-206ENST00000464750 CCDC74AQ96AQ1 378 aa25.85■■□□□ 1.73
U2AF1-206ENST00000464750 SMIM14Q96QK8 99 aa25.85■■□□□ 1.73
U2AF1-206ENST00000464750 TEX101Q9BY14 249 aa25.85■■□□□ 1.73
U2AF1-206ENST00000464750 TMEM168Q9H0V1 697 aa25.85■■□□□ 1.73
U2AF1-206ENST00000464750 GOLGA6AQ9NYA3 693 aa25.85■■□□□ 1.73
U2AF1-206ENST00000464750 A0A0U1RQS6 177 aa25.84■■□□□ 1.73
U2AF1-206ENST00000464750 AKR1B15C9JRZ8 316 aaPredicted RBP25.84■■□□□ 1.73
U2AF1-206ENST00000464750 CES1P23141 567 aa25.84■■□□□ 1.73
U2AF1-206ENST00000464750 EPHB1P54762 984 aa25.84■■□□□ 1.73
U2AF1-206ENST00000464750 LRRC66Q68CR7 880 aa25.84■■□□□ 1.73
U2AF1-206ENST00000464750 LRRC69Q6ZNQ3 347 aa25.84■■□□□ 1.73
U2AF1-206ENST00000464750 PLD5Q8N7P1 536 aa25.84■■□□□ 1.73
U2AF1-206ENST00000464750 SUDS3Q9H7L9 328 aaPredicted RBP25.84■■□□□ 1.73
U2AF1-206ENST00000464750 POLR1BQ9H9Y6 1135 aa25.84■■□□□ 1.73
U2AF1-206ENST00000464750 ENTPD2Q9Y5L3 495 aa25.84■■□□□ 1.73
U2AF1-206ENST00000464750 A0A0J9YYE9 177 aa25.83■■□□□ 1.73
U2AF1-206ENST00000464750 ZNF487B1APH4 448 aa25.83■■□□□ 1.73
U2AF1-206ENST00000464750 RRP8O43159 456 aaKnown RBP25.83■■□□□ 1.73
U2AF1-206ENST00000464750 TRBC1P01850 177 aa25.83■■□□□ 1.73
U2AF1-206ENST00000464750 KRT1P04264 644 aa25.83■■□□□ 1.73
U2AF1-206ENST00000464750 CA4P22748 312 aa25.83■■□□□ 1.73
U2AF1-206ENST00000464750 ITPKBP27987 946 aa25.83■■□□□ 1.73
U2AF1-206ENST00000464750 LSSP48449 732 aa25.83■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms