RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 TRIM54Q9BYV2 358 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 PRKD2Q9BZL6 878 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 NANOGQ9H9S0 305 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 CYP4F12Q9HCS2 524 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 ATAD3AQ9NVI7 634 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 TRNAU1APQ9NX07 287 aaKnown RBP7.31□□□□□ -1.24
USP48-206ENST00000464577 COX16Q9P0S2 106 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 FBXW11Q9UKB1 542 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 FBXO5Q9UKT4 447 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 AKT3Q9Y243 479 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 VWA7Q9Y334 891 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 FAM32AQ9Y421 112 aaKnown RBP7.31□□□□□ -1.24
USP48-206ENST00000464577 PCDHA9Q9Y5H5 950 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 NRCAMQ92823 1304 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 ZNF236Q9UL36 1845 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 J3QRK9 145 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 PIRO00625 290 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 UBFD1O14562 309 aaKnown RBP7.31□□□□□ -1.24
USP48-206ENST00000464577 NRP1O14786 923 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 LDLRP01130 860 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 INSRRP14616 1297 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 ZNF182P17025 639 aaPredicted RBP7.31□□□□□ -1.24
USP48-206ENST00000464577 NPR3P17342 541 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 CAPN3P20807 821 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 MATN1P21941 496 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 JAK1P23458 1154 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 OXTRP30559 389 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 PNPLA4P41247 253 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 GEMP55040 296 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 EEFSECP57772 596 aaKnown RBP7.31□□□□□ -1.24
USP48-206ENST00000464577 LAMC2Q13753 1193 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 ZNF846Q147U1 533 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 OXA1LQ15070 435 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 KIF19Q2TAC6 998 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 UGT3A2Q3SY77 523 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 FBXO47Q5MNV8 452 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 RBM48Q5RL73 367 aaKnown RBP7.31□□□□□ -1.24
USP48-206ENST00000464577 ZNF678Q5SXM1 525 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 ZNF470Q6ECI4 717 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 DENND5AQ6IQ26 1287 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 ESRP1Q6NXG1 681 aaKnown RBP7.31□□□□□ -1.24
USP48-206ENST00000464577 TMEM53Q6P2H8 277 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 GALNT18Q6P9A2 607 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 IGFN1Q86VF2 1251 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 OFCC1Q8IZS5 231 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 CLYBLQ8N0X4 340 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 ZNF513Q8N8E2 541 aaPredicted RBP7.31□□□□□ -1.24
USP48-206ENST00000464577 SCAIQ8N9R8 606 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 SNX31Q8N9S9 440 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 RNF169Q8NCN4 708 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 GABPB2Q8TAK5 448 aaPredicted RBP7.31□□□□□ -1.24
USP48-206ENST00000464577 CALML6Q8TD86 181 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 NDRG1Q92597 394 aaKnown RBP7.31□□□□□ -1.24
USP48-206ENST00000464577 FBXL8Q96CD0 374 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 LRRC58Q96CX6 371 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 UBXN10Q96LJ8 280 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 CCDC138Q96M89 665 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 ZNF641Q96N77 438 aaPredicted RBP7.31□□□□□ -1.24
USP48-206ENST00000464577 ZNF347Q96SE7 839 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 PSD2Q9BQI7 771 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 RAD21L1Q9H4I0 556 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 FANCEQ9HB96 536 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 ZFYVE28Q9HCC9 887 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 UBP1Q9NZI7 540 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 KIAA1522Q9P206 1035 aaPredicted RBP7.31□□□□□ -1.24
USP48-206ENST00000464577 HACL1Q9UJ83 578 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 ANAPC2Q9UJX6 822 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 UBQLN1Q9UMX0 589 aaKnown RBP7.31□□□□□ -1.24
USP48-206ENST00000464577 CORINQ9Y5Q5 1042 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 TLL2Q9Y6L7 1015 aa7.31□□□□□ -1.24
USP48-206ENST00000464577 SBF1O95248 1867 aa7.3□□□□□ -1.24
USP48-206ENST00000464577 ZNF638Q14966 1978 aaKnown RBP7.3□□□□□ -1.24
USP48-206ENST00000464577 TYW5A2RUC4 315 aaKnown RBP7.3□□□□□ -1.24
USP48-206ENST00000464577 I6L893 689 aaPredicted RBP7.3□□□□□ -1.24
USP48-206ENST00000464577 TPST1O60507 370 aa7.3□□□□□ -1.24
USP48-206ENST00000464577 CNOT3O75175 753 aaKnown RBP7.3□□□□□ -1.24
USP48-206ENST00000464577 DNAJB5O75953 348 aa7.3□□□□□ -1.24
USP48-206ENST00000464577 WISP3O95389 354 aaPredicted RBP7.3□□□□□ -1.24
USP48-206ENST00000464577 CLIC3O95833 236 aa7.3□□□□□ -1.24
USP48-206ENST00000464577 CD4P01730 458 aa7.3□□□□□ -1.24
USP48-206ENST00000464577 FYNP06241 537 aa7.3□□□□□ -1.24
USP48-206ENST00000464577 FGF4P08620 206 aa7.3□□□□□ -1.24
USP48-206ENST00000464577 ALOX5P09917 674 aa7.3□□□□□ -1.24
USP48-206ENST00000464577 FUT4P22083 530 aa7.3□□□□□ -1.24
USP48-206ENST00000464577 WARSP23381 471 aaKnown RBP7.3□□□□□ -1.24
USP48-206ENST00000464577 LMO2P25791 158 aa7.3□□□□□ -1.24
USP48-206ENST00000464577 GSTM2P28161 218 aa7.3□□□□□ -1.24
USP48-206ENST00000464577 AXLP30530 894 aa7.3□□□□□ -1.24
USP48-206ENST00000464577 ADRA1AP35348 466 aa7.3□□□□□ -1.24
USP48-206ENST00000464577 TIE1P35590 1138 aa7.3□□□□□ -1.24
USP48-206ENST00000464577 POLR2IP36954 125 aaKnown RBP7.3□□□□□ -1.24
USP48-206ENST00000464577 TMED10P49755 219 aaKnown RBP7.3□□□□□ -1.24
USP48-206ENST00000464577 GSK3BP49841 420 aa7.3□□□□□ -1.24
USP48-206ENST00000464577 ILF2Q12905 390 aaKnown RBP7.3□□□□□ -1.24
USP48-206ENST00000464577 POU6F1Q14863 301 aa7.3□□□□□ -1.24
USP48-206ENST00000464577 FXNQ16595 210 aa7.3□□□□□ -1.24
USP48-206ENST00000464577 CYP51A1Q16850 503 aa7.3□□□□□ -1.24
USP48-206ENST00000464577 TRIM16LQ309B1 348 aa7.3□□□□□ -1.24
USP48-206ENST00000464577 ARL13BQ3SXY8 428 aa7.3□□□□□ -1.24
USP48-206ENST00000464577 AASDHQ4L235 1098 aaPredicted RBP7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms