RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-210	ENST00000464313	ZIC3	O60481	467 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	DOK2	O60496	412 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	ZBED4	O75132	1171 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	FTCD	O95954	541 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	ALPL	P05186	524 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	HADHA	P40939	763 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	BNC1	Q01954	994 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	CRYZ	Q08257	329 aa	Known RBP	4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	DDR1	Q08345	913 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	MAMLD1	Q13495	774 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	OLIG2	Q13516	323 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	NEDD9	Q14511	834 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	KLHL24	Q6TFL4	600 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	GSTA5	Q7RTV2	222 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	FBXL14	Q8N1E6	418 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	WDTC1	Q8N5D0	677 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	RND1	Q92730	232 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	USP6NL	Q92738	828 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	SLC41A2	Q96JW4	573 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	SLITRK1	Q96PX8	696 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	FAM110A	Q9BQ89	295 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	TMEM47	Q9BQJ4	181 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	HAUS8	Q9BT25	410 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	NOX4	Q9NPH5	578 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	EIF2B3	Q9NR50	452 aa	Known RBP	4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	RRP7BP	Q9NSQ0	103 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	MAP3K20	Q9NYL2	800 aa	Known RBP	4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	EHD2	Q9NZN4	543 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	DLGAP2	Q9P1A6	1054 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	PAM16	Q9Y3D7	125 aa		4.14	□□□□□ -1.75
PTPN12-210	ENST00000464313	EVPL	Q92817	2033 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	hDV102S1	A0JD36	115 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	FAM90A8P	A6NJQ4	464 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	LIPT2	A6NK58	231 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	BTBD18	B2RXH4	712 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	AP3D1	O14617	1153 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	TIPRL	O75663	272 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	CH25H	O95992	272 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	ACAA1	P09110	424 aa	Predicted RBP	4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	FAM90A13P	P0C7W8	464 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	FAM90A24P	P0C7X0	464 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	ZNF182	P17025	639 aa	Predicted RBP	4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	HNRNPH1	P31943	449 aa	Known RBP	4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	PPARG	P37231	505 aa	Predicted RBP	4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	EIF5	P55010	431 aa	Known RBP	4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	ARF3	P61204	181 aa	Predicted RBP	4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	ARF1	P84077	181 aa	Known RBP	4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	KRTAP27-1	Q3LI81	207 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	CDON	Q4KMG0	1287 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	TDRD12	Q587J7	1177 aa	Known RBP	4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	C6orf141	Q5SZD1	244 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	GKAP1	Q5VSY0	366 aa	Predicted RBP	4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	ITPRIPL1	Q6GPH6	555 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	TMED8	Q6PL24	325 aa	Predicted RBP	4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	DLK2	Q6UY11	383 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	ZC3HC1	Q86WB0	502 aa	Known RBP	4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	FOXRED2	Q8IWF2	684 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	ARHGAP12	Q8IWW6	846 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	OR14L1P	Q8NHC6	308 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	NEK9	Q8TD19	979 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	TMED6	Q8WW62	240 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	IGSF8	Q969P0	613 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	ZNF479	Q96JC4	524 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	C1orf74	Q96LT6	269 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	CSF3R	Q99062	836 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	SLC25A33	Q9BSK2	321 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	NDST4	Q9H3R1	872 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	PPP1R3E	Q9H7J1	279 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	RANGRF	Q9HD47	186 aa	Predicted RBP	4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	HINT3	Q9NQE9	182 aa	Known RBP	4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	TBC1D22B	Q9NU19	505 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	AGO1	Q9UL18	857 aa	Known RBP	4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	ERVK-11	Q9UQG0	969 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	SLC45A1	Q9Y2W3	748 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	UTY	O14607	1347 aa		4.13	□□□□□ -1.75
PTPN12-210	ENST00000464313	RUSC2	Q8N2Y8	1516 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313		A0A1W2PRG0	241 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	C1orf226	A1L170	272 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	WNT9B	O14905	357 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	NDUFS7	O75251	213 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	SERPINI2	O75830	405 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	IPO7	O95373	1038 aa	Known RBP	4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	HOXC6	P09630	235 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	CD58	P19256	250 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	GPT	P24298	496 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	TM4SF1	P30408	202 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	SSTR2	P30874	369 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	CDKN2A	P42771	156 aa	Known RBP	4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	PDLIM4	P50479	330 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	DRG2	P55039	364 aa	Known RBP	4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	NANOS2	P60321	138 aa	Known RBP	4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	DHX34	Q14147	1143 aa	Known RBP	4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	USP41	Q3LFD5	358 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	WDR78	Q5VTH9	848 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	FAM205BP	Q63HN1	556 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	C8orf82	Q6P1X6	216 aa	Predicted RBP	4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	KLHL35	Q6PF15	583 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	PQLC2	Q6ZP29	291 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	CLEC17A	Q6ZS10	378 aa		4.12	□□□□□ -1.75
PTPN12-210	ENST00000464313	WDR63	Q8IWG1	891 aa		4.12	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms