RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 MFSD11O43934 449 aa20.56■□□□□ 0.88
PDLIM4-205ENST00000463615 KRT7P08729 469 aa20.56■□□□□ 0.88
PDLIM4-205ENST00000463615 MYCLP1P12525 358 aaPredicted RBP20.56■□□□□ 0.88
PDLIM4-205ENST00000463615 CCNCP24863 283 aa20.56■□□□□ 0.88
PDLIM4-205ENST00000463615 PDX1P52945 283 aa20.56■□□□□ 0.88
PDLIM4-205ENST00000463615 PCBP4P57723 403 aaKnown RBP20.56■□□□□ 0.88
PDLIM4-205ENST00000463615 MAXP61244 160 aa20.56■□□□□ 0.88
PDLIM4-205ENST00000463615 IFI16Q16666 785 aaKnown RBP20.56■□□□□ 0.88
PDLIM4-205ENST00000463615 TSR1Q2NL82 804 aaKnown RBP20.56■□□□□ 0.88
PDLIM4-205ENST00000463615 ATP13A4Q4VNC1 1196 aa20.56■□□□□ 0.88
PDLIM4-205ENST00000463615 ANKRD20A8PQ5CZ79 823 aa20.56■□□□□ 0.88
PDLIM4-205ENST00000463615 ARMC12Q5T9G4 340 aa20.56■□□□□ 0.88
PDLIM4-205ENST00000463615 SPECC1LQ69YQ0 1117 aa20.56■□□□□ 0.88
PDLIM4-205ENST00000463615 TIGD7Q6NT04 549 aaPredicted RBP20.56■□□□□ 0.88
PDLIM4-205ENST00000463615 MAP7D3Q8IWC1 876 aa20.56■□□□□ 0.88
PDLIM4-205ENST00000463615 RAVER1Q8IY67 606 aaKnown RBP20.56■□□□□ 0.88
PDLIM4-205ENST00000463615 CTNNBL1Q8WYA6 563 aaPredicted RBP20.56■□□□□ 0.88
PDLIM4-205ENST00000463615 PRR11Q96HE9 360 aaPredicted RBP20.56■□□□□ 0.88
PDLIM4-205ENST00000463615 LGR4Q9BXB1 951 aa20.56■□□□□ 0.88
PDLIM4-205ENST00000463615 POLR1EQ9GZS1 481 aaKnown RBP20.56■□□□□ 0.88
PDLIM4-205ENST00000463615 NPIPB15A6NHN6 443 aaPredicted RBP20.55■□□□□ 0.88
PDLIM4-205ENST00000463615 A8MX80 341 aa20.55■□□□□ 0.88
PDLIM4-205ENST00000463615 ZNF487B1APH4 448 aa20.55■□□□□ 0.88
PDLIM4-205ENST00000463615 CBFA2T2O43439 604 aa20.55■□□□□ 0.88
PDLIM4-205ENST00000463615 TMEM253P0C7T8 217 aa20.55■□□□□ 0.88
PDLIM4-205ENST00000463615 PNLIPP16233 465 aa20.55■□□□□ 0.88
PDLIM4-205ENST00000463615 TAS2R40P59535 323 aa20.55■□□□□ 0.88
PDLIM4-205ENST00000463615 SKOR1P84550 965 aa20.55■□□□□ 0.88
PDLIM4-205ENST00000463615 TLE3Q04726 772 aa20.55■□□□□ 0.88
PDLIM4-205ENST00000463615 DPTQ07507 201 aa20.55■□□□□ 0.88
PDLIM4-205ENST00000463615 USP45Q70EL2 814 aa20.55■□□□□ 0.88
PDLIM4-205ENST00000463615 TECPR1Q7Z6L1 1165 aa20.55■□□□□ 0.88
PDLIM4-205ENST00000463615 NLRP8Q86W28 1048 aa20.55■□□□□ 0.88
PDLIM4-205ENST00000463615 KCTD6Q8NC69 237 aa20.55■□□□□ 0.88
PDLIM4-205ENST00000463615 PDCD6IPQ8WUM4 868 aaKnown RBP20.55■□□□□ 0.88
PDLIM4-205ENST00000463615 ATXN7L3BQ96GX2 97 aa20.55■□□□□ 0.88
PDLIM4-205ENST00000463615 CRELD1Q96HD1 420 aa20.55■□□□□ 0.88
PDLIM4-205ENST00000463615 SLC46A1Q96NT5 459 aa20.55■□□□□ 0.88
PDLIM4-205ENST00000463615 NT5MQ9NPB1 228 aa20.55■□□□□ 0.88
PDLIM4-205ENST00000463615 PHPT1Q9NRX4 125 aaPredicted RBP20.55■□□□□ 0.88
PDLIM4-205ENST00000463615 THSD1Q9NS62 852 aa20.55■□□□□ 0.88
PDLIM4-205ENST00000463615 GULP1Q9UBP9 304 aa20.55■□□□□ 0.88
PDLIM4-205ENST00000463615 APPL1Q9UKG1 709 aa20.55■□□□□ 0.88
PDLIM4-205ENST00000463615 SSUH2Q9Y2M2 353 aa20.55■□□□□ 0.88
PDLIM4-205ENST00000463615 RAI2Q9Y5P3 530 aa20.55■□□□□ 0.88
PDLIM4-205ENST00000463615 NOBOXO60393 691 aa20.54■□□□□ 0.88
PDLIM4-205ENST00000463615 KRT10P13645 584 aa20.54■□□□□ 0.88
PDLIM4-205ENST00000463615 SPIDRQ14159 915 aa20.54■□□□□ 0.88
PDLIM4-205ENST00000463615 CRTC1Q6UUV9 634 aa20.54■□□□□ 0.88
PDLIM4-205ENST00000463615 HSD11B1LQ7Z5J1 315 aa20.54■□□□□ 0.88
PDLIM4-205ENST00000463615 VSIG1Q86XK7 387 aa20.54■□□□□ 0.88
PDLIM4-205ENST00000463615 CPNE8Q86YQ8 564 aa20.54■□□□□ 0.88
PDLIM4-205ENST00000463615 SPACA3Q8IXA5 215 aa20.54■□□□□ 0.88
PDLIM4-205ENST00000463615 PQLC3Q8N755 202 aa20.54■□□□□ 0.88
PDLIM4-205ENST00000463615 WDR36Q8NI36 951 aaKnown RBP20.54■□□□□ 0.88
PDLIM4-205ENST00000463615 CCDC74AQ96AQ1 378 aa20.54■□□□□ 0.88
PDLIM4-205ENST00000463615 LIN37Q96GY3 246 aaPredicted RBP20.54■□□□□ 0.88
PDLIM4-205ENST00000463615 SEMA3CQ99985 751 aa20.54■□□□□ 0.88
PDLIM4-205ENST00000463615 PACSIN1Q9BY11 444 aa20.54■□□□□ 0.88
PDLIM4-205ENST00000463615 FRMD8Q9BZ67 464 aaPredicted RBP20.54■□□□□ 0.88
PDLIM4-205ENST00000463615 MRPL40Q9NQ50 206 aaKnown RBP20.54■□□□□ 0.88
PDLIM4-205ENST00000463615 HAUS2Q9NVX0 235 aa20.54■□□□□ 0.88
PDLIM4-205ENST00000463615 RABGEF1Q9UJ41 708 aa20.54■□□□□ 0.88
PDLIM4-205ENST00000463615 SATB2Q9UPW6 733 aa20.54■□□□□ 0.88
PDLIM4-205ENST00000463615 SHROOM3Q8TF72 1996 aa20.54■□□□□ 0.88
PDLIM4-205ENST00000463615 PRSS38A1L453 326 aa20.53■□□□□ 0.88
PDLIM4-205ENST00000463615 TMX2-CTNND1H3BSU7 103 aa20.53■□□□□ 0.88
PDLIM4-205ENST00000463615 CEACAM5P06731 702 aa20.53■□□□□ 0.88
PDLIM4-205ENST00000463615 GLB1P16278 677 aa20.53■□□□□ 0.88
PDLIM4-205ENST00000463615 ZNF30P17039 623 aa20.53■□□□□ 0.88
PDLIM4-205ENST00000463615 MX2P20592 715 aa20.53■□□□□ 0.88
PDLIM4-205ENST00000463615 ETV3P41162 512 aa20.53■□□□□ 0.88
PDLIM4-205ENST00000463615 SSR1P43307 286 aaKnown RBP20.53■□□□□ 0.88
PDLIM4-205ENST00000463615 ARHGEF7Q14155 803 aa20.53■□□□□ 0.88
PDLIM4-205ENST00000463615 IHHQ14623 411 aa20.53■□□□□ 0.88
PDLIM4-205ENST00000463615 CERCAMQ5T4B2 595 aa20.53■□□□□ 0.88
PDLIM4-205ENST00000463615 TAF8Q7Z7C8 310 aa20.53■□□□□ 0.88
PDLIM4-205ENST00000463615 HEATR4Q86WZ0 1026 aa20.53■□□□□ 0.88
PDLIM4-205ENST00000463615 C17orf82Q86X59 251 aaPredicted RBP20.53■□□□□ 0.88
PDLIM4-205ENST00000463615 NDUFAF2Q8N183 169 aa20.53■□□□□ 0.88
PDLIM4-205ENST00000463615 ARRDC2Q8TBH0 407 aa20.53■□□□□ 0.88
PDLIM4-205ENST00000463615 GPBAR1Q8TDU6 330 aa20.53■□□□□ 0.88
PDLIM4-205ENST00000463615 TMEM168Q9H0V1 697 aa20.53■□□□□ 0.88
PDLIM4-205ENST00000463615 CYP4F12Q9HCS2 524 aa20.53■□□□□ 0.88
PDLIM4-205ENST00000463615 TRNAU1APQ9NX07 287 aaKnown RBP20.53■□□□□ 0.88
PDLIM4-205ENST00000463615 SIRPGQ9P1W8 387 aa20.53■□□□□ 0.88
PDLIM4-205ENST00000463615 CCDC187A0A096LP49 1063 aa20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 A0A0J9YYE9 177 aa20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 A0A1W2PQM1 296 aa20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 CDRT15L2A8MXV6 281 aa20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 D6RAR5 112 aa20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 CASC3O15234 703 aaKnown RBP20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 MTA2O94776 668 aa20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 TRBC1P01850 177 aa20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 PDHA1P08559 390 aa20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 RPL26P61254 145 aaKnown RBP20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 CDK3Q00526 305 aa20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 EIF3IQ13347 325 aaKnown RBP20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 HLTFQ14527 1009 aaKnown RBP eCLIP20.52■□□□□ 0.88
PDLIM4-205ENST00000463615 Q6ZVL8 140 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms