RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 NR1D2Q14995 579 aa15.71■□□□□ 0.11
SND1-203ENST00000463020 CA9Q16790 459 aa15.71■□□□□ 0.11
SND1-203ENST00000463020 PARP15Q460N3 678 aa15.71■□□□□ 0.11
SND1-203ENST00000463020 SCYL2Q6P3W7 929 aa15.71■□□□□ 0.11
SND1-203ENST00000463020 BRAT1Q6PJG6 821 aa15.71■□□□□ 0.11
SND1-203ENST00000463020 SRLQ86TD4 932 aa15.71■□□□□ 0.11
SND1-203ENST00000463020 ZSCAN1Q8NBB4 408 aa15.71■□□□□ 0.11
SND1-203ENST00000463020 MSANTD4Q8NCY6 345 aa15.71■□□□□ 0.11
SND1-203ENST00000463020 GPBAR1Q8TDU6 330 aa15.71■□□□□ 0.11
SND1-203ENST00000463020 TMEM159Q96B96 161 aa15.71■□□□□ 0.11
SND1-203ENST00000463020 ECHDC3Q96DC8 303 aa15.71■□□□□ 0.11
SND1-203ENST00000463020 ZNF641Q96N77 438 aaPredicted RBP15.71■□□□□ 0.11
SND1-203ENST00000463020 TRIM5Q9C035 493 aa15.71■□□□□ 0.11
SND1-203ENST00000463020 SLC39A8Q9C0K1 460 aa15.71■□□□□ 0.11
SND1-203ENST00000463020 OCIAD1Q9NX40 245 aa15.71■□□□□ 0.11
SND1-203ENST00000463020 PCDHB11Q9Y5F2 797 aa15.71■□□□□ 0.11
SND1-203ENST00000463020 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.71■□□□□ 0.113e-8■□□□□ 9.8
SND1-203ENST00000463020 CLEC18AA5D8T8 446 aa15.7■□□□□ 0.1
SND1-203ENST00000463020 STMND1H3BQB6 276 aa15.7■□□□□ 0.1
SND1-203ENST00000463020 TRAFD1O14545 582 aaPredicted RBP15.7■□□□□ 0.1
SND1-203ENST00000463020 PPM1DO15297 605 aa15.7■□□□□ 0.1
SND1-203ENST00000463020 ELFN1P0C7U0 828 aa15.7■□□□□ 0.1
SND1-203ENST00000463020 CCNB1P14635 433 aa15.7■□□□□ 0.1
SND1-203ENST00000463020 UGT1A3P35503 534 aa15.7■□□□□ 0.1
SND1-203ENST00000463020 POLD2P49005 469 aa15.7■□□□□ 0.1
SND1-203ENST00000463020 PAPOLAP51003 745 aaKnown RBP15.7■□□□□ 0.1
SND1-203ENST00000463020 ZNF75DP51815 510 aa15.7■□□□□ 0.1
SND1-203ENST00000463020 YBEYP58557 167 aaPredicted RBP15.7■□□□□ 0.1
SND1-203ENST00000463020 AFMIDQ63HM1 303 aa15.7■□□□□ 0.1
SND1-203ENST00000463020 PNCKQ6P2M8 343 aa15.7■□□□□ 0.1
SND1-203ENST00000463020 BORAQ6PGQ7 559 aa15.7■□□□□ 0.1
SND1-203ENST00000463020 CLEC18BQ6UXF7 455 aa15.7■□□□□ 0.1
SND1-203ENST00000463020 DPPA4Q7L190 304 aa15.7■□□□□ 0.1
SND1-203ENST00000463020 PIM3Q86V86 326 aa15.7■□□□□ 0.1
SND1-203ENST00000463020 CLEC18CQ8NCF0 446 aa15.7■□□□□ 0.1
SND1-203ENST00000463020 ATL2Q8NHH9 583 aa15.7■□□□□ 0.1
SND1-203ENST00000463020 ZDHHC1Q8WTX9 485 aa15.7■□□□□ 0.1
SND1-203ENST00000463020 ART4Q93070 314 aa15.7■□□□□ 0.1
SND1-203ENST00000463020 COQ10AQ96MF6 247 aa15.7■□□□□ 0.1
SND1-203ENST00000463020 BPIFA3Q9BQP9 254 aa15.7■□□□□ 0.1
SND1-203ENST00000463020 WDR26Q9H7D7 661 aa15.7■□□□□ 0.1
SND1-203ENST00000463020 CARS2Q9HA77 564 aaKnown RBP15.7■□□□□ 0.1
SND1-203ENST00000463020 TAB2Q9NYJ8 693 aa15.7■□□□□ 0.1
SND1-203ENST00000463020 TAAR2Q9P1P5 351 aa15.7■□□□□ 0.1
SND1-203ENST00000463020 SMTNL1A8MU46 457 aa15.69■□□□□ 0.1
SND1-203ENST00000463020 PES1O00541 588 aaKnown RBP15.69■□□□□ 0.1
SND1-203ENST00000463020 TNFRSF10CO14798 259 aa15.69■□□□□ 0.1
SND1-203ENST00000463020 NKX2-8O15522 239 aa15.69■□□□□ 0.1
SND1-203ENST00000463020 HOXC4P09017 264 aaPredicted RBP15.69■□□□□ 0.1
SND1-203ENST00000463020 SFTPCP11686 197 aa15.69■□□□□ 0.1
SND1-203ENST00000463020 TNFAIP3P21580 790 aa15.69■□□□□ 0.1
SND1-203ENST00000463020 CD82P27701 267 aa15.69■□□□□ 0.1
SND1-203ENST00000463020 CDC25BP30305 580 aa15.69■□□□□ 0.1
SND1-203ENST00000463020 GSCP56915 257 aaPredicted RBP15.69■□□□□ 0.1
SND1-203ENST00000463020 FOXK1P85037 733 aa15.69■□□□□ 0.1
SND1-203ENST00000463020 UBAP2LQ14157 1087 aaKnown RBP15.69■□□□□ 0.1
SND1-203ENST00000463020 IQCB1Q15051 598 aa15.69■□□□□ 0.1
SND1-203ENST00000463020 TPD52L1Q16890 204 aaPredicted RBP15.69■□□□□ 0.1
SND1-203ENST00000463020 ATP1A1-AS1Q5TC04 95 aa15.69■□□□□ 0.1
SND1-203ENST00000463020 SLC30A9Q6PML9 568 aa15.69■□□□□ 0.1
SND1-203ENST00000463020 SARM1Q6SZW1 724 aa15.69■□□□□ 0.1
SND1-203ENST00000463020 ZNF761Q86XN6 746 aaPredicted RBP15.69■□□□□ 0.1
SND1-203ENST00000463020 ARHGAP12Q8IWW6 846 aa15.69■□□□□ 0.1
SND1-203ENST00000463020 NAGSQ8N159 534 aa15.69■□□□□ 0.1
SND1-203ENST00000463020 NPWQ8N729 165 aa15.69■□□□□ 0.1
SND1-203ENST00000463020 MLKLQ8NB16 471 aa15.69■□□□□ 0.1
SND1-203ENST00000463020 RNF31Q96EP0 1072 aa15.69■□□□□ 0.1
SND1-203ENST00000463020 TUBGCP5Q96RT8 1024 aa15.69■□□□□ 0.1
SND1-203ENST00000463020 NLRC4Q9NPP4 1024 aa15.69■□□□□ 0.1
SND1-203ENST00000463020 ZNF71Q9NQZ8 489 aaPredicted RBP15.69■□□□□ 0.1
SND1-203ENST00000463020 ADAM22Q9P0K1 906 aa15.69■□□□□ 0.1
SND1-203ENST00000463020 B4GALT6Q9UBX8 382 aa15.69■□□□□ 0.1
SND1-203ENST00000463020 GNPDA1P46926 289 aa15.68■□□□□ 0.1
SND1-203ENST00000463020 LIMK2P53671 638 aa15.68■□□□□ 0.1
SND1-203ENST00000463020 POLR2FP61218 127 aaKnown RBP15.68■□□□□ 0.1
SND1-203ENST00000463020 ACOX1Q15067 660 aa15.68■□□□□ 0.1
SND1-203ENST00000463020 CNGA3Q16281 694 aa15.68■□□□□ 0.1
SND1-203ENST00000463020 CLEC16AQ2KHT3 1053 aa15.68■□□□□ 0.1
SND1-203ENST00000463020 PPP1R15BQ5SWA1 713 aa15.68■□□□□ 0.1
SND1-203ENST00000463020 CFAP58Q5T655 872 aa15.68■□□□□ 0.1
SND1-203ENST00000463020 HIST2H2BCQ6DN03 193 aa15.68■□□□□ 0.1
SND1-203ENST00000463020 RFLNAQ6ZTI6 216 aa15.68■□□□□ 0.1
SND1-203ENST00000463020 MON1BQ7L1V2 547 aa15.68■□□□□ 0.1
SND1-203ENST00000463020 HEATR4Q86WZ0 1026 aa15.68■□□□□ 0.1
SND1-203ENST00000463020 ZNF677Q86XU0 584 aa15.68■□□□□ 0.1
SND1-203ENST00000463020 UNC5BQ8IZJ1 945 aa15.68■□□□□ 0.1
SND1-203ENST00000463020 FNIP1Q8TF40 1166 aa15.68■□□□□ 0.1
SND1-203ENST00000463020 NAP1L5Q96NT1 182 aaPredicted RBP15.68■□□□□ 0.1
SND1-203ENST00000463020 MCEEQ96PE7 176 aa15.68■□□□□ 0.1
SND1-203ENST00000463020 SMIM14Q96QK8 99 aa15.68■□□□□ 0.1
SND1-203ENST00000463020 TAAR9Q96RI9 348 aa15.68■□□□□ 0.1
SND1-203ENST00000463020 PEBP4Q96S96 227 aa15.68■□□□□ 0.1
SND1-203ENST00000463020 SELENOOQ9BVL4 669 aa15.68■□□□□ 0.1
SND1-203ENST00000463020 FRMD8Q9BZ67 464 aaPredicted RBP15.68■□□□□ 0.1
SND1-203ENST00000463020 ATP13A3Q9H7F0 1226 aa15.68■□□□□ 0.1
SND1-203ENST00000463020 FAM207AQ9NSI2 230 aaPredicted RBP15.68■□□□□ 0.1
SND1-203ENST00000463020 SUFUQ9UMX1 484 aa15.68■□□□□ 0.1
SND1-203ENST00000463020 PCDHGA3Q9Y5H0 932 aa15.68■□□□□ 0.1
SND1-203ENST00000463020 SPTAN1Q13813 2472 aaKnown RBP15.68■□□□□ 0.1
SND1-203ENST00000463020 IGHV1OR21-1A0A087WYE8 117 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms