RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 ZSWIM9Q86XI8 627 aa7.74□□□□□ -1.17
SMC3-202ENST00000462899 NLGN4XQ8N0W4 816 aa7.74□□□□□ -1.17
SMC3-202ENST00000462899 PELI3Q8N2H9 469 aa7.74□□□□□ -1.17
SMC3-202ENST00000462899 C1orf131Q8NDD1 294 aaKnown RBP7.74□□□□□ -1.17
SMC3-202ENST00000462899 AGBL5Q8NDL9 886 aa7.74□□□□□ -1.17
SMC3-202ENST00000462899 NLGN4YQ8NFZ3 816 aaPredicted RBP7.74□□□□□ -1.17
SMC3-202ENST00000462899 OR56A4Q8NGH8 313 aa7.74□□□□□ -1.17
SMC3-202ENST00000462899 ATL2Q8NHH9 583 aa7.74□□□□□ -1.17
SMC3-202ENST00000462899 HCAR2Q8TDS4 363 aa7.74□□□□□ -1.17
SMC3-202ENST00000462899 FOXD4L4Q8WXT5 416 aaPredicted RBP7.74□□□□□ -1.17
SMC3-202ENST00000462899 TEFMQ96QE5 360 aaKnown RBP7.74□□□□□ -1.17
SMC3-202ENST00000462899 TTYH3Q9C0H2 523 aa7.74□□□□□ -1.17
SMC3-202ENST00000462899 RETREG1Q9H6L5 497 aa7.74□□□□□ -1.17
SMC3-202ENST00000462899 NOL6Q9H6R4 1146 aaKnown RBP7.74□□□□□ -1.17
SMC3-202ENST00000462899 GPN2Q9H9Y4 310 aaPredicted RBP7.74□□□□□ -1.17
SMC3-202ENST00000462899 AKAP7Q9P0M2 348 aaPredicted RBP7.74□□□□□ -1.17
SMC3-202ENST00000462899 KCTD3Q9Y597 815 aa7.74□□□□□ -1.17
SMC3-202ENST00000462899 CROCCQ5TZA2 2017 aa7.74□□□□□ -1.17
SMC3-202ENST00000462899 MED13LQ71F56 2210 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 PRSS38A1L453 326 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 CFAP69A5D8W1 941 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 PPM1DO15297 605 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 INSIG1O15503 277 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 TMCC1O94876 653 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 F9P00740 461 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 PCCBP05166 539 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 FURINP09958 794 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 KRT5P13647 590 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 CCNB1P14635 433 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 COL8A1P27658 744 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 MAP4P27816 1152 aaKnown RBP7.73□□□□□ -1.17
SMC3-202ENST00000462899 FLT3P36888 993 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 STAT1P42224 750 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 MAPKAPK2P49137 400 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 SULT1E1P49888 294 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 LIG3P49916 1009 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 MARSP56192 900 aaKnown RBP7.73□□□□□ -1.17
SMC3-202ENST00000462899 GEMIN4P57678 1058 aaKnown RBP7.73□□□□□ -1.17
SMC3-202ENST00000462899 DEUP1Q05D60 604 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 MAP7Q14244 749 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 POLD3Q15054 466 aaPredicted RBP7.73□□□□□ -1.17
SMC3-202ENST00000462899 UGP2Q16851 508 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 SLC25A52Q3SY17 297 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 AMZ1Q400G9 498 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 OXLD1Q5BKU9 147 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 DCAF12Q5T6F0 453 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 MAMDC2Q7Z304 686 aaPredicted RBP7.73□□□□□ -1.17
SMC3-202ENST00000462899 ARHGAP22Q7Z5H3 698 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 ZDHHC17Q8IUH5 632 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 PASD1Q8IV76 773 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 TRIM59Q8IWR1 403 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 DRC7Q8IY82 874 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 CCDC13Q8IYE1 715 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 UNC5BQ8IZJ1 945 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 NAGSQ8N159 534 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 CCDC112Q8NEF3 446 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 KIAA1524Q8TCG1 905 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 PATE1Q8WXA2 126 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 SHC3Q92529 594 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 ZNF592Q92610 1267 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 CEP63Q96MT8 703 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 GDAP1L1Q96MZ0 367 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 TSG101Q99816 390 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 EFHD1Q9BUP0 239 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 LGR4Q9BXB1 951 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 INTS2Q9H0H0 1204 aaKnown RBP7.73□□□□□ -1.17
SMC3-202ENST00000462899 MAGEH1Q9H213 219 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 DPEP2Q9H4A9 486 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 ZNF395Q9H8N7 513 aaPredicted RBP7.73□□□□□ -1.17
SMC3-202ENST00000462899 PCDH12Q9NPG4 1184 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 PRDM8Q9NQV8 689 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 TMEM51Q9NW97 253 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 TMEM248Q9NWD8 314 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 SLC39A1Q9NY26 324 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.73□□□□□ -1.17
SMC3-202ENST00000462899 LHX3Q9UBR4 397 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 STAP1Q9ULZ2 295 aa7.73□□□□□ -1.17
SMC3-202ENST00000462899 MRPS18BQ9Y676 258 aaKnown RBP7.73□□□□□ -1.17
SMC3-202ENST00000462899 A1L4Q6 167 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 EFCAB7A8K855 629 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 KDELR3O43731 214 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 SRGAP2O75044 1071 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 VPS4BO75351 444 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 ZNF202O95125 648 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 PIGNO95427 931 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 ECEL1O95672 775 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 DDAH2O95865 285 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 RHOQP17081 205 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 ALDH4A1P30038 563 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 CDH5P33151 784 aaPredicted RBP7.72□□□□□ -1.17
SMC3-202ENST00000462899 CSTF2P33240 577 aaKnown RBP eCLIP7.72□□□□□ -1.17
SMC3-202ENST00000462899 ETFBP38117 255 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 GABRB2P47870 512 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 MC2RQ01718 297 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 MC1RQ01726 317 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 PNOCQ13519 176 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 SEPT6Q14141 434 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 RAB6CQ53S08 254 aa7.72□□□□□ -1.17
SMC3-202ENST00000462899 INO80DQ53TQ3 878 aaPredicted RBP7.72□□□□□ -1.17
SMC3-202ENST00000462899 C1QL3Q5VWW1 255 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms