RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 PGLSO95336 258 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 PCCBP05166 539 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 KRT7P08729 469 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 CD48P09326 243 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 CYP2A6P11509 494 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-207ENST00000461798 PNLIPP16233 465 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 CCNCP24863 283 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 ITPKBP27987 946 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 VIPR1P32241 457 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 MAN1A1P33908 653 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 GARSP41250 739 aaKnown RBP9.17□□□□□ -0.94
BRCA1-207ENST00000461798 MLLT3P42568 568 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-207ENST00000461798 DPTQ07507 201 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 TRAF2Q12933 501 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 KRT81Q14533 505 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 ACOX1Q15067 660 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 CNGA3Q16281 694 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 ATP13A4Q4VNC1 1196 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 ANKRD20A8PQ5CZ79 823 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 KCTD16Q68DU8 428 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 SPECC1LQ69YQ0 1117 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 ZNF787Q6DD87 383 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 RBM44Q6ZP01 1051 aaKnown RBP9.17□□□□□ -0.94
BRCA1-207ENST00000461798 NYAP1Q6ZVC0 841 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 RD3Q7Z3Z2 195 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 TECPR1Q7Z6L1 1165 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 MAP7D3Q8IWC1 876 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 RAVER1Q8IY67 606 aaKnown RBP9.17□□□□□ -0.94
BRCA1-207ENST00000461798 ZNF564Q8TBZ8 553 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-207ENST00000461798 PIH1D2Q8WWB5 315 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 OR1E3Q8WZA6 343 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 DTD2Q96FN9 168 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 PRR11Q96HE9 360 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-207ENST00000461798 SLC46A1Q96NT5 459 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 DNAJC7Q99615 494 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 CCDC3Q9BQI4 270 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 ZNF670Q9BS34 389 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 LGR4Q9BXB1 951 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 TEX101Q9BY14 249 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 FGF22Q9HCT0 170 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 ASCL3Q9NQ33 180 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 CTTNBP2NLQ9P2B4 639 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 GPR34Q9UPC5 381 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 DOLKQ9UPQ8 538 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 ENTPD2Q9Y5L3 495 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 LAMA5O15230 3695 aa9.17□□□□□ -0.94
BRCA1-207ENST00000461798 A8MX80 341 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 ZNF487B1APH4 448 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 TMX2-CTNND1H3BSU7 103 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 CBFA2T2O43439 604 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 CPP00450 1065 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 MPOP05164 745 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 TMEM253P0C7T8 217 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 MYCLP1P12525 358 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-207ENST00000461798 KRT10P13645 584 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 LHCGRP22888 699 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 TAS2R40P59535 323 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 MAXP61244 160 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 GABREP78334 506 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 SKOR1P84550 965 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 TRIM14Q14142 442 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 IHHQ14623 411 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 TCEAL1Q15170 157 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 IFI16Q16666 785 aaKnown RBP9.16□□□□□ -0.94
BRCA1-207ENST00000461798 TSR1Q2NL82 804 aaKnown RBP9.16□□□□□ -0.94
BRCA1-207ENST00000461798 ARMC12Q5T9G4 340 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 NCBP2-AS2Q69YL0 99 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 TIGD7Q6NT04 549 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-207ENST00000461798 HSD11B1LQ7Z5J1 315 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 C17orf82Q86X59 251 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-207ENST00000461798 NDUFAF2Q8N183 169 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 PELI3Q8N2H9 469 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 PQLC3Q8N755 202 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 PAF1Q8N7H5 531 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 KYQ8NBH2 561 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 KCTD6Q8NC69 237 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 ZNF248Q8NDW4 579 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 CTNNBL1Q8WYA6 563 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-207ENST00000461798 PDXPQ96GD0 296 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 SCARF2Q96GP6 870 aaPredicted RBP9.16□□□□□ -0.94
BRCA1-207ENST00000461798 ATXN7L3BQ96GX2 97 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 SEMA3CQ99985 751 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 POLR1EQ9GZS1 481 aaKnown RBP9.16□□□□□ -0.94
BRCA1-207ENST00000461798 WDR26Q9H7D7 661 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 NT5MQ9NPB1 228 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 TRNAU1APQ9NX07 287 aaKnown RBP9.16□□□□□ -0.94
BRCA1-207ENST00000461798 GULP1Q9UBP9 304 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 APPL1Q9UKG1 709 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 RAI2Q9Y5P3 530 aa9.16□□□□□ -0.94
BRCA1-207ENST00000461798 MYLKQ15746 1914 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 PTPRQQ9UMZ3 2332 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 IGSF10Q6WRI0 2623 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 A0A0J9YYE9 177 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 A0A1W2PQM1 296 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 NPIPB15A6NHN6 443 aaPredicted RBP9.15□□□□□ -0.94
BRCA1-207ENST00000461798 MFSD11O43934 449 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 NOBOXO60393 691 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 MTA2O94776 668 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 PRLP01236 227 aa9.15□□□□□ -0.94
BRCA1-207ENST00000461798 TRBC1P01850 177 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms