RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 NUP205Q92621 2012 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 LOC285095A0A1B0GVY8 99 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 OR51F1A6NGY5 319 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 SUPT3HB4E1H0 165 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 PRMT5O14744 637 aaPredicted RBP4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 SMAD6O43541 496 aaKnown RBP4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 CACNG3O60359 315 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 DIAPH2O60879 1101 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 TULP3O75386 442 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 SUPT3HO75486 399 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 TRIM16O95361 564 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 PRAMEF1O95521 474 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 ASMTLO95671 621 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 CYP17A1P05093 508 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 ALPIP09923 528 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 LTA4HP09960 611 aaKnown RBP4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 CCDC166P0CW27 439 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 COL6A2P12110 1019 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 SRCP12931 536 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 DRD4P21917 467 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 HLA-FP30511 346 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 SPAM1P38567 509 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 RASSF2P50749 326 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 PRKAA2P54646 552 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 WDR4P57081 412 aaKnown RBP4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 SLC18A2Q05940 514 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 CACNG1Q06432 222 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 GRM2Q14416 872 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 EIF4HQ15056 248 aaKnown RBP4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 ACOX1Q15067 660 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 ZNF77Q15935 545 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 SYTL3Q4VX76 610 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 FAM78AQ5JUQ0 283 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 HECTD2Q5U5R9 776 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 EMC10Q5UCC4 262 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 FAM46CQ5VWP2 391 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 LYPLAL1Q5VWZ2 237 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 TRIM68Q6AZZ1 485 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 BRAT1Q6PJG6 821 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 GDPD4Q6W3E5 623 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 DPY19L3Q6ZPD9 716 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 MTSS1LQ765P7 747 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 GPR149Q86SP6 731 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 CACUL1Q86Y37 369 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 RBFAQ8N0V3 343 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 VN1R2Q8NFZ6 395 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 OR52K2Q8NGK3 314 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 WFDC5Q8TCV5 224 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 NECTIN4Q96NY8 510 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 LRRC37BQ96QE4 947 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 GPR22Q99680 433 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 EGFL8Q99944 293 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 SPATA16Q9BXB7 569 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 OSBPL1AQ9BXW6 950 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 LRRC3Q9BY71 257 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 TRIM54Q9BYV2 358 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 UNKQ9C0B0 810 aaKnown RBP4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 PDFQ9HBH1 243 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 CYP4F12Q9HCS2 524 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 ELOVL2Q9NXB9 296 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 LHX3Q9UBR4 397 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 FAM8A1Q9UBU6 413 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 PRKAG3Q9UGI9 489 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 ERVW-1Q9UQF0 538 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 FAM50BQ9Y247 325 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 FIS1Q9Y3D6 152 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 GLYATL1P3A0A0U1RQE8 302 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 BIRC5O15392 142 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 PLIN3O60664 434 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 GPC4O75487 556 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 PEX11BO96011 259 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 EPHX1P07099 455 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 BPGMP07738 259 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 PDHA1P08559 390 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 POU2F2P09086 479 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 ELFN1P0C7U0 828 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 PKMP14618 531 aaKnown RBP4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 GKP32189 559 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 HNRNPH2P55795 449 aaKnown RBP4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 BST1Q10588 318 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 PDE1CQ14123 709 aaPredicted RBP4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 ITIH4Q14624 930 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 ITPRIPL2Q3MIP1 535 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 ZDHHC20Q5W0Z9 365 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 DENND5AQ6IQ26 1287 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 CNSTQ6PJW8 725 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 TRIM67Q6ZTA4 783 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 MYLK4Q86YV6 388 aaPredicted RBP4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 MYO1HQ8N1T3 1032 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 C2CD4AQ8NCU7 369 aaPredicted RBP4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 RDH11Q8TC12 318 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 AGR3Q8TD06 166 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 ZNF398Q8TD17 642 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 PPM1EQ8WY54 764 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 ZNF707Q96C28 371 aaPredicted RBP4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 ZSWIM3Q96MP5 696 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 ZNF641Q96N77 438 aaPredicted RBP4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 PANX3Q96QZ0 392 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 COPS8Q99627 209 aa4.12□□□□□ -1.75
ATP13A3-206ENST00000461660 KXD1Q9BQD3 176 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms