RNA–Protein interactions for RNA: ENST00000461434.1

PSMD4-207, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 801 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-207ENST00000461434 CSNK1DP48730 415 aa10.85□□□□□ -0.67
PSMD4-207ENST00000461434 HCAR3P49019 387 aa10.85□□□□□ -0.67
PSMD4-207ENST00000461434 RPIAP49247 311 aa10.85□□□□□ -0.67
PSMD4-207ENST00000461434 RENBPP51606 427 aa10.85□□□□□ -0.67
PSMD4-207ENST00000461434 ZNF135P52742 658 aaPredicted RBP10.85□□□□□ -0.67
PSMD4-207ENST00000461434 HK3P52790 923 aa10.85□□□□□ -0.67
PSMD4-207ENST00000461434 SRP54P61011 504 aaKnown RBP10.85□□□□□ -0.67
PSMD4-207ENST00000461434 SLC25A11Q02978 314 aaKnown RBP10.85□□□□□ -0.67
PSMD4-207ENST00000461434 ITKQ08881 620 aa10.85□□□□□ -0.67
PSMD4-207ENST00000461434 RTP5Q14D33 572 aa10.85□□□□□ -0.67
PSMD4-207ENST00000461434 CDCP2Q5VXM1 449 aa10.85□□□□□ -0.67
PSMD4-207ENST00000461434 ESRP1Q6NXG1 681 aaKnown RBP10.85□□□□□ -0.67
PSMD4-207ENST00000461434 LIPIQ6XZB0 460 aa10.85□□□□□ -0.67
PSMD4-207ENST00000461434 DPPA4Q7L190 304 aa10.85□□□□□ -0.67
PSMD4-207ENST00000461434 BBS5Q8N3I7 341 aa10.85□□□□□ -0.67
PSMD4-207ENST00000461434 PGBD5Q8N414 524 aa10.85□□□□□ -0.67
PSMD4-207ENST00000461434 LZTR1Q8N653 840 aa10.85□□□□□ -0.67
PSMD4-207ENST00000461434 ZNF564Q8TBZ8 553 aaPredicted RBP10.85□□□□□ -0.67
PSMD4-207ENST00000461434 HCAR2Q8TDS4 363 aa10.85□□□□□ -0.67
PSMD4-207ENST00000461434 ATXN7L3BQ96GX2 97 aa10.85□□□□□ -0.67
PSMD4-207ENST00000461434 WDR92Q96MX6 357 aa10.85□□□□□ -0.67
PSMD4-207ENST00000461434 BOCQ9BWV1 1114 aa10.85□□□□□ -0.67
PSMD4-207ENST00000461434 NT5MQ9NPB1 228 aa10.85□□□□□ -0.67
PSMD4-207ENST00000461434 MRPL40Q9NQ50 206 aaKnown RBP10.85□□□□□ -0.67
PSMD4-207ENST00000461434 CTTNBP2NLQ9P2B4 639 aa10.85□□□□□ -0.67
PSMD4-207ENST00000461434 SALL4Q9UJQ4 1053 aa10.85□□□□□ -0.67
PSMD4-207ENST00000461434 CAPN11Q9UMQ6 739 aa10.85□□□□□ -0.67
PSMD4-207ENST00000461434 GPR34Q9UPC5 381 aa10.85□□□□□ -0.67
PSMD4-207ENST00000461434 LRP4O75096 1905 aa10.85□□□□□ -0.67
PSMD4-207ENST00000461434 LOC400499M0QZD8 3231 aa10.85□□□□□ -0.67
PSMD4-207ENST00000461434 ATRXP46100 2492 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 A0A087WV48 116 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 EME2A4GXA9 379 aaPredicted RBP10.84□□□□□ -0.67
PSMD4-207ENST00000461434 TMEM202A6NGA9 273 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 RNF223E7ERA6 249 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 MYO1FO00160 1098 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 TPP1O14773 563 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 MFSD11O43934 449 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 TNFP01375 233 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 CYP1A2P05177 515 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 CTPS1P17812 591 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 SERPINB6P35237 376 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 ACTN2P35609 894 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 MMP13P45452 471 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 PEX5P50542 639 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 BLKP51451 505 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 AP1S1P61966 158 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 NSUN2Q08J23 767 aaKnown RBP eCLIP10.84□□□□□ -0.67
PSMD4-207ENST00000461434 TRAF2Q12933 501 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 MTM1Q13496 603 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 COL9A2Q14055 689 aaPredicted RBP10.84□□□□□ -0.67
PSMD4-207ENST00000461434 NAA30Q147X3 362 aaPredicted RBP10.84□□□□□ -0.67
PSMD4-207ENST00000461434 ACAP1Q15027 740 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 PTPRRQ15256 657 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 ELOCQ15369 112 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 TBC1D25Q3MII6 688 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 ZSCAN23Q3MJ62 389 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 ATP13A4Q4VNC1 1196 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 ALKBH5Q6P6C2 394 aaKnown RBP10.84□□□□□ -0.67
PSMD4-207ENST00000461434 RBM44Q6ZP01 1051 aaKnown RBP10.84□□□□□ -0.67
PSMD4-207ENST00000461434 TAF8Q7Z7C8 310 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 GKN2Q86XP6 184 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 PELI3Q8N2H9 469 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 FSTL5Q8N475 847 aaPredicted RBP10.84□□□□□ -0.67
PSMD4-207ENST00000461434 ATL2Q8NHH9 583 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 SCG3Q8WXD2 468 aaKnown RBP10.84□□□□□ -0.67
PSMD4-207ENST00000461434 OR1E3Q8WZA6 343 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 FGF11Q92914 225 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 FUBP1Q96AE4 644 aaKnown RBP10.84□□□□□ -0.67
PSMD4-207ENST00000461434 ECHDC3Q96DC8 303 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 PSKH2Q96QS6 385 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 LGMNQ99538 433 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 CCDC3Q9BQI4 270 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 PACSIN1Q9BY11 444 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 XPO4Q9C0E2 1151 aaKnown RBP10.84□□□□□ -0.67
PSMD4-207ENST00000461434 DEF6Q9H4E7 631 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 NOD2Q9HC29 1040 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 FGF22Q9HCT0 170 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 NCKIPSDQ9NZQ3 722 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 PADI4Q9UM07 663 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 SATB2Q9UPW6 733 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 RAI2Q9Y5P3 530 aa10.84□□□□□ -0.67
PSMD4-207ENST00000461434 BPTFQ12830 3046 aa10.83□□□□□ -0.68
PSMD4-207ENST00000461434 PTPRQQ9UMZ3 2332 aa10.83□□□□□ -0.68
PSMD4-207ENST00000461434 A0A0U1RQS6 177 aa10.83□□□□□ -0.68
PSMD4-207ENST00000461434 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.83□□□□□ -0.68
PSMD4-207ENST00000461434 PMS2P1A4D2B8 440 aa10.83□□□□□ -0.68
PSMD4-207ENST00000461434 EIF4E1BA6NMX2 242 aaKnown RBP10.83□□□□□ -0.68
PSMD4-207ENST00000461434 B4DGG1 531 aa10.83□□□□□ -0.68
PSMD4-207ENST00000461434 TRAFD1O14545 582 aaPredicted RBP10.83□□□□□ -0.68
PSMD4-207ENST00000461434 TOR1BO14657 336 aa10.83□□□□□ -0.68
PSMD4-207ENST00000461434 MAFKO60675 156 aa10.83□□□□□ -0.68
PSMD4-207ENST00000461434 PEX11BO96011 259 aa10.83□□□□□ -0.68
PSMD4-207ENST00000461434 ALPIP09923 528 aa10.83□□□□□ -0.68
PSMD4-207ENST00000461434 GM2AP17900 193 aa10.83□□□□□ -0.68
PSMD4-207ENST00000461434 MAPK1P28482 360 aa10.83□□□□□ -0.68
PSMD4-207ENST00000461434 VIPR1P32241 457 aa10.83□□□□□ -0.68
PSMD4-207ENST00000461434 POLR2LP62875 67 aaKnown RBP10.83□□□□□ -0.68
PSMD4-207ENST00000461434 SPIDRQ14159 915 aa10.83□□□□□ -0.68
PSMD4-207ENST00000461434 CNGA3Q16281 694 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms