RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 SKA1Q96BD8 255 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 SERAC1Q96JX3 654 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 SPATA13Q96N96 652 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 FCRL5Q96RD9 977 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 RUFY1Q96T51 708 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 NAP1L3Q99457 506 aaPredicted RBP11.12□□□□□ -0.63
APTX-209ENST00000460940 C1QTNF2Q9BXJ5 285 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 ADGRE3Q9BY15 652 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 ZDHHC5Q9C0B5 715 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 GBA3Q9H227 469 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 PCDH9Q9HC56 1237 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 CAPN10Q9HC96 672 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 GGT7Q9UJ14 662 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 PPIL1Q9Y3C6 166 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 LIN7AO14910 233 aaPredicted RBP11.12□□□□□ -0.63
APTX-209ENST00000460940 LIASO43766 372 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 FAM107AO95990 144 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 ATP1A1P05023 1023 aaKnown RBP11.12□□□□□ -0.63
APTX-209ENST00000460940 CFIP05156 583 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 MYBL2P10244 700 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 NEFHP12036 1026 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 NFKB1P19838 968 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 HNRNPA2B1P22626 353 aaKnown RBP11.12□□□□□ -0.63
APTX-209ENST00000460940 MAT2AP31153 395 aaKnown RBP11.12□□□□□ -0.63
APTX-209ENST00000460940 CD68P34810 354 aaPredicted RBP11.12□□□□□ -0.63
APTX-209ENST00000460940 EPHB1P54762 984 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 LMNB2Q03252 620 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 OVGP1Q12889 678 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 SGCGQ13326 291 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 NAA25Q14CX7 972 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 PDCD2Q16342 344 aaPredicted RBP11.12□□□□□ -0.63
APTX-209ENST00000460940 LACTB2Q53H82 288 aaPredicted RBP11.12□□□□□ -0.63
APTX-209ENST00000460940 CCDC121Q6ZUS5 278 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 PID1Q7Z2X4 250 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 ALYREFQ86V81 257 aaKnown RBP11.12□□□□□ -0.63
APTX-209ENST00000460940 IQCHQ86VS3 1027 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.12□□□□□ -0.63
APTX-209ENST00000460940 TMEM145Q8NBT3 493 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 PIH1D2Q8WWB5 315 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 RTP4Q96DX8 246 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 SCRN2Q96FV2 425 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 SLC6A18Q96N87 628 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 LENG8Q96PV6 779 aaPredicted RBP11.12□□□□□ -0.63
APTX-209ENST00000460940 RBM15Q96T37 977 aaKnown RBP eCLIP11.12□□□□□ -0.63
APTX-209ENST00000460940 FAM118BQ9BPY3 351 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 SLC17A9Q9BYT1 436 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 USP29Q9HBJ7 922 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 FAM153AQ9UHL3 310 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 TTC7AQ9ULT0 858 aaPredicted RBP11.12□□□□□ -0.63
APTX-209ENST00000460940 ANKRD36A6QL64 1941 aa11.12□□□□□ -0.63
APTX-209ENST00000460940 USP34Q70CQ2 3546 aa11.11□□□□□ -0.63
APTX-209ENST00000460940 C5orf60A6NFR6 353 aa11.11□□□□□ -0.63
APTX-209ENST00000460940 IGLON5A6NGN9 336 aa11.11□□□□□ -0.63
APTX-209ENST00000460940 CAPN8A6NHC0 703 aa11.11□□□□□ -0.63
APTX-209ENST00000460940 ANXA9O76027 345 aa11.11□□□□□ -0.63
APTX-209ENST00000460940 TM7SF2O76062 418 aa11.11□□□□□ -0.63
APTX-209ENST00000460940 SYPP08247 313 aa11.11□□□□□ -0.63
APTX-209ENST00000460940 ELFN1P0C7U0 828 aa11.11□□□□□ -0.63
APTX-209ENST00000460940 VIPR1P32241 457 aa11.11□□□□□ -0.63
APTX-209ENST00000460940 CXCR5P32302 372 aa11.11□□□□□ -0.63
APTX-209ENST00000460940 RALGDSQ12967 914 aa11.11□□□□□ -0.63
APTX-209ENST00000460940 MPP3Q13368 585 aa11.11□□□□□ -0.63
APTX-209ENST00000460940 IHHQ14623 411 aa11.11□□□□□ -0.63
APTX-209ENST00000460940 AGERQ15109 404 aa11.11□□□□□ -0.63
APTX-209ENST00000460940 OASLQ15646 514 aaKnown RBP11.11□□□□□ -0.63
APTX-209ENST00000460940 CCDC6Q16204 474 aa11.11□□□□□ -0.63
APTX-209ENST00000460940 RNF187Q5TA31 235 aaPredicted RBP11.11□□□□□ -0.63
APTX-209ENST00000460940 DRICH1Q6PGQ1 229 aaPredicted RBP11.11□□□□□ -0.63
APTX-209ENST00000460940 RASGEF1CQ8N431 466 aa11.11□□□□□ -0.63
APTX-209ENST00000460940 ATG4AQ8WYN0 398 aa11.11□□□□□ -0.63
APTX-209ENST00000460940 OSBPL9Q96SU4 736 aa11.11□□□□□ -0.63
APTX-209ENST00000460940 WRAP53Q9BUR4 548 aaKnown RBP11.11□□□□□ -0.63
APTX-209ENST00000460940 EBF2Q9HAK2 575 aa11.11□□□□□ -0.63
APTX-209ENST00000460940 AASDHPPTQ9NRN7 309 aa11.11□□□□□ -0.63
APTX-209ENST00000460940 B4GALT6Q9UBX8 382 aa11.11□□□□□ -0.63
APTX-209ENST00000460940 SNX12Q9UMY4 172 aa11.11□□□□□ -0.63
APTX-209ENST00000460940 CHKBQ9Y259 395 aa11.11□□□□□ -0.63
APTX-209ENST00000460940 FRYLO94915 3013 aa11.11□□□□□ -0.63
APTX-209ENST00000460940 A0A0J9YYE9 177 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 PSMD11O00231 422 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 PGRMC1O00264 195 aaKnown RBP11.1□□□□□ -0.63
APTX-209ENST00000460940 VILLO15195 856 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 MGRN1O60291 552 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 MAGEC1O60732 1142 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 MMP20O60882 483 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 GCATO75600 419 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 DNAJC8O75937 253 aaPredicted RBP11.1□□□□□ -0.63
APTX-209ENST00000460940 EPOP01588 193 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 TRBC1P01850 177 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 ITGAVP06756 1048 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 PDHA1P08559 390 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 C6P13671 934 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 PRLRP16471 622 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 TCP1P17987 556 aaKnown RBP11.1□□□□□ -0.63
APTX-209ENST00000460940 CD38P28907 300 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 HOXD11P31277 338 aaPredicted RBP11.1□□□□□ -0.63
APTX-209ENST00000460940 STIP1P31948 543 aaKnown RBP11.1□□□□□ -0.63
APTX-209ENST00000460940 CDK18Q07002 472 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 PRPSAP1Q14558 356 aa11.1□□□□□ -0.63
APTX-209ENST00000460940 SF3A2Q15428 464 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms