RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 ST6GALNAC4Q9H4F1 302 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 ACTR5Q9H9F9 607 aaPredicted RBP3.03□□□□□ -1.92
HPS3-203ENST00000460822 SLC28A3Q9HAS3 691 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 ARPP21Q9UBL0 812 aaPredicted RBP3.03□□□□□ -1.92
HPS3-203ENST00000460822 R3HDM2Q9Y2K5 976 aaKnown RBP3.03□□□□□ -1.92
HPS3-203ENST00000460822 CMAHPQ9Y471 501 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 EEA1Q15075 1411 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 UTYO14607 1347 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 KIF21BO75037 1637 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.03□□□□□ -1.92
HPS3-203ENST00000460822 A0A1W2PR77 199 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 LRRC3CA6NJW4 275 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 C19orf81C9J6K1 198 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 KLRF2D3W0D1 207 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 UBE2Q2LH0YL09 131 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 ATP2C2O75185 946 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 NEURL1O76050 574 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 TMCC1O94876 653 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 SLU7O95391 586 aaKnown RBP3.03□□□□□ -1.92
HPS3-203ENST00000460822 CTPS1P17812 591 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 EPHB2P29323 1055 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 ATP6V1E1P36543 226 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 GP5P40197 560 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 CLCN5P51795 746 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 YPEL5P62699 121 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 SRSF4Q08170 494 aaKnown RBP3.03□□□□□ -1.92
HPS3-203ENST00000460822 ALCAMQ13740 583 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 IL11RAQ14626 422 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 PGM5Q15124 567 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 C15orf59Q2T9L4 293 aaPredicted RBP3.03□□□□□ -1.92
HPS3-203ENST00000460822 MMEL1Q495T6 779 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 CDONQ4KMG0 1287 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 COLEC12Q5KU26 742 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 CAVIN1Q6NZI2 390 aaKnown RBP3.03□□□□□ -1.92
HPS3-203ENST00000460822 CHST3Q7LGC8 479 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 CCDC186Q7Z3E2 898 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 CCDC170Q8IYT3 715 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 MMP21Q8N119 569 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 NUP93Q8N1F7 819 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.03□□□□□ -1.92
HPS3-203ENST00000460822 PIGOQ8TEQ8 1089 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 DEPDC1BQ8WUY9 529 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 NSMCE1Q8WV22 266 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 PTERQ96BW5 349 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 ZNF419Q96HQ0 510 aaPredicted RBP3.03□□□□□ -1.92
HPS3-203ENST00000460822 FNBP1Q96RU3 617 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 SEZ6LQ9BYH1 1024 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 FAM129AQ9BZQ8 928 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 MAGEE1Q9HCI5 957 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 PLEKHB1Q9UF11 243 aaPredicted RBP3.03□□□□□ -1.92
HPS3-203ENST00000460822 IPO11Q9UI26 975 aaKnown RBP3.03□□□□□ -1.92
HPS3-203ENST00000460822 MAU2Q9Y6X3 613 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 SOGA1O94964 1423 aa3.03□□□□□ -1.92
HPS3-203ENST00000460822 KAT6AQ92794 2004 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 TOP2AP11388 1531 aaKnown RBP3.02□□□□□ -1.93
HPS3-203ENST00000460822 C1orf226A1L170 272 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 TYW5A2RUC4 315 aaKnown RBP3.02□□□□□ -1.93
HPS3-203ENST00000460822 LRRC72A6NJI9 287 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 SMIM22K7EJ46 135 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 RNMTO43148 476 aaKnown RBP3.02□□□□□ -1.93
HPS3-203ENST00000460822 TADA2AO75478 443 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 GOSR1O95249 250 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 PLAUP00749 431 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 ETFAP13804 333 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 SRD5A1P18405 259 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 WT1P19544 449 aaPredicted RBP3.02□□□□□ -1.93
HPS3-203ENST00000460822 PSMA3P25788 255 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 MC5RP33032 325 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 SHMT1P34896 483 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 ABCG1P45844 678 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 CXCR3P49682 368 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 SUOXP51687 545 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 BPIFB3P59826 476 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 TFAP4Q01664 338 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 SHBQ15464 509 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 PKN2Q16513 984 aaKnown RBP3.02□□□□□ -1.93
HPS3-203ENST00000460822 C6orf141Q5SZD1 244 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 LRIF1Q5T3J3 769 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 KRT79Q5XKE5 535 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 TMEM198Q66K66 360 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 CES5AQ6NT32 575 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 SUSD1Q6UWL2 747 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 PET117Q6UWS5 81 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 METTL23Q86XA0 190 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 SCYL3Q8IZE3 742 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 MCUQ8NE86 351 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 OR8H1Q8NGG4 311 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 OR14L1PQ8NHC6 308 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 HUS1BQ8NHY5 278 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 KIF18AQ8NI77 898 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 SARAFQ96BY9 339 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 RITA1Q96K30 269 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 TMEM47Q9BQJ4 181 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 SLC29A3Q9BZD2 475 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 TRPV4Q9HBA0 871 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 MAFFQ9ULX9 164 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 PLAGL1Q9UM63 463 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 GPRASP1Q5JY77 1395 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 SMARCA2P51531 1590 aa3.02□□□□□ -1.93
HPS3-203ENST00000460822 LOC100509620A0A075B734 347 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms