RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 TSGA13Q96PP4 275 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 PACSIN1Q9BY11 444 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 POLR1EQ9GZS1 481 aaKnown RBP11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 NT5MQ9NPB1 228 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 ASCL3Q9NQ33 180 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 MRPL40Q9NQ50 206 aaKnown RBP11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 SIRPGQ9P1W8 387 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 GULP1Q9UBP9 304 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 AMACRQ9UHK6 382 aa11.82□□□□□ -0.52
SOX2-OT-201ENST00000460739 A0A1W2PNU3 283 aaPredicted RBP11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 SSU72P8A0A1W2PR75 194 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 NPIPB15A6NHN6 443 aaPredicted RBP11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 MATN3O15232 486 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 CASC3O15234 703 aaKnown RBP11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 CBFA2T2O43439 604 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 KRT7P08729 469 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 MYCLP1P12525 358 aaPredicted RBP11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 CES1P23141 567 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 CCNCP24863 283 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 TEAD1P28347 426 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 MAN1A1P33908 653 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 GJC1P36383 396 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 ETV3P41162 512 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 PDX1P52945 283 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 PCBP4P57723 403 aaKnown RBP11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 TAS2R40P59535 323 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 SPIDRQ14159 915 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 IFI16Q16666 785 aaKnown RBP11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 TSR1Q2NL82 804 aaKnown RBP11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 SOWAHCQ53LP3 525 aaPredicted RBP11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 TIGD7Q6NT04 549 aaPredicted RBP11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 OGFOD3Q6PK18 319 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 USP45Q70EL2 814 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 HSD11B1LQ7Z5J1 315 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 MAP7D3Q8IWC1 876 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 ZNF248Q8NDW4 579 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 PIH1D2Q8WWB5 315 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 CCDC74AQ96AQ1 378 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 SEMA3CQ99985 751 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 TEX101Q9BY14 249 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 TMEM168Q9H0V1 697 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 PRORYQ9H606 182 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 CYP4F12Q9HCS2 524 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 RABGEF1Q9UJ41 708 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 SATB2Q9UPW6 733 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 PCDHGA8Q9Y5G5 932 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 RAI2Q9Y5P3 530 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 SMG1Q96Q15 3661 aaKnown RBP11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 KIF26BQ2KJY2 2108 aa11.81□□□□□ -0.52
SOX2-OT-201ENST00000460739 SCN8AQ9UQD0 1980 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 PRSS38A1L453 326 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 PDHA1P08559 390 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 TMEM253P0C7T8 217 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 PNLIPP16233 465 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 TLE3Q04726 772 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 DPTQ07507 201 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 ITKQ08881 620 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 CCDC173Q0VFZ6 552 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 ARHGEF7Q14155 803 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 IHHQ14623 411 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 PTPRRQ15256 657 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 C3orf38Q5JPI3 329 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 DENND2CQ68D51 928 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 Q6ZVL8 140 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 TECPR1Q7Z6L1 1165 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 TAF8Q7Z7C8 310 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 TSPAN33Q86UF1 283 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 HEATR4Q86WZ0 1026 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 SPACA3Q8IXA5 215 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 NDUFAF2Q8N183 169 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 PQLC3Q8N755 202 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 PRR11Q96HE9 360 aaPredicted RBP11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 SLC46A1Q96NT5 459 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 PHPT1Q9NRX4 125 aaPredicted RBP11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 THSD1Q9NS62 852 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 ABHD10Q9NUJ1 306 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 HAUS2Q9NVX0 235 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 ZNHIT6Q9NWK9 470 aaKnown RBP11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 APPL1Q9UKG1 709 aa11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 ARHGEF17Q96PE2 2063 aaPredicted RBP11.8□□□□□ -0.52
SOX2-OT-201ENST00000460739 ATRXP46100 2492 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 PTPRQQ9UMZ3 2332 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 A0A0J9YYE9 177 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 A0A1W2PQM1 296 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 AKR1B10O60218 316 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 NOBOXO60393 691 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 MAP3K6O95382 1288 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 TRBC1P01850 177 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 FUCA1P04066 466 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 CEACAM5P06731 702 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 KRT10P13645 584 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 CCNB1P14635 433 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 GLB1P16278 677 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 CTPS1P17812 591 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 MX2P20592 715 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 KDELR1P24390 212 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 MLLT3P42568 568 aaPredicted RBP11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 GBE1Q04446 702 aa11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 SLC10A2Q12908 348 aaPredicted RBP11.79□□□□□ -0.52
SOX2-OT-201ENST00000460739 C14orf28Q4W4Y0 310 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms