RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 METAP2P50579 478 aaKnown RBP eCLIP6.3□□□□□ -1.4
CKAP2-204ENST00000459902 F2RL1P55085 397 aa6.3□□□□□ -1.4
CKAP2-204ENST00000459902 CSTF3Q12996 717 aaKnown RBP6.3□□□□□ -1.4
CKAP2-204ENST00000459902 EIF2S3LQ2VIR3 472 aaKnown RBP6.3□□□□□ -1.4
CKAP2-204ENST00000459902 SLC45A4Q5BKX6 768 aa6.3□□□□□ -1.4
CKAP2-204ENST00000459902 PGBD5Q8N414 524 aa6.3□□□□□ -1.4
CKAP2-204ENST00000459902 SPATA6LQ8N4H0 392 aa6.3□□□□□ -1.4
CKAP2-204ENST00000459902 FRMD1Q8N878 549 aa6.3□□□□□ -1.4
CKAP2-204ENST00000459902 PPP1R13BQ96KQ4 1090 aa6.3□□□□□ -1.4
CKAP2-204ENST00000459902 TMEM47Q9BQJ4 181 aa6.3□□□□□ -1.4
CKAP2-204ENST00000459902 ITPAQ9BY32 194 aa6.3□□□□□ -1.4
CKAP2-204ENST00000459902 NDST4Q9H3R1 872 aa6.3□□□□□ -1.4
CKAP2-204ENST00000459902 MUC13Q9H3R2 512 aa6.3□□□□□ -1.4
CKAP2-204ENST00000459902 WDR26Q9H7D7 661 aa6.3□□□□□ -1.4
CKAP2-204ENST00000459902 HINT3Q9NQE9 182 aaKnown RBP6.3□□□□□ -1.4
CKAP2-204ENST00000459902 KRT84Q9NSB2 600 aa6.3□□□□□ -1.4
CKAP2-204ENST00000459902 OCIAD1Q9NX40 245 aa6.3□□□□□ -1.4
CKAP2-204ENST00000459902 LACTBL1A8MY62 500 aa6.29□□□□□ -1.4
CKAP2-204ENST00000459902 NDUFS7O75251 213 aa6.29□□□□□ -1.4
CKAP2-204ENST00000459902 NKX2-2O95096 273 aa6.29□□□□□ -1.4
CKAP2-204ENST00000459902 MLYCDO95822 493 aa6.29□□□□□ -1.4
CKAP2-204ENST00000459902 PLA2G2AP14555 144 aa6.29□□□□□ -1.4
CKAP2-204ENST00000459902 ZNF182P17025 639 aaPredicted RBP6.29□□□□□ -1.4
CKAP2-204ENST00000459902 MAOAP21397 527 aa6.29□□□□□ -1.4
CKAP2-204ENST00000459902 TNFRSF8P28908 595 aa6.29□□□□□ -1.4
CKAP2-204ENST00000459902 SSTR2P30874 369 aa6.29□□□□□ -1.4
CKAP2-204ENST00000459902 STX2P32856 288 aa6.29□□□□□ -1.4
CKAP2-204ENST00000459902 PDLIM4P50479 330 aa6.29□□□□□ -1.4
CKAP2-204ENST00000459902 DDR1Q08345 913 aa6.29□□□□□ -1.4
CKAP2-204ENST00000459902 DHX34Q14147 1143 aaKnown RBP6.29□□□□□ -1.4
CKAP2-204ENST00000459902 MAPRE1Q15691 268 aaKnown RBP6.29□□□□□ -1.4
CKAP2-204ENST00000459902 PPP6R3Q5H9R7 873 aaPredicted RBP6.29□□□□□ -1.4
CKAP2-204ENST00000459902 METTL2BQ6P1Q9 378 aaKnown RBP6.29□□□□□ -1.4
CKAP2-204ENST00000459902 SPATA2LQ8IUW3 424 aaPredicted RBP6.29□□□□□ -1.4
CKAP2-204ENST00000459902 RND1Q92730 232 aa6.29□□□□□ -1.4
CKAP2-204ENST00000459902 ARHGEF2Q92974 986 aaKnown RBP6.29□□□□□ -1.4
CKAP2-204ENST00000459902 METTL2AQ96IZ6 378 aaKnown RBP6.29□□□□□ -1.4
CKAP2-204ENST00000459902 THOC3Q96J01 351 aaKnown RBP6.29□□□□□ -1.4
CKAP2-204ENST00000459902 CNGB3Q9NQW8 809 aa6.29□□□□□ -1.4
CKAP2-204ENST00000459902 EHD2Q9NZN4 543 aa6.29□□□□□ -1.4
CKAP2-204ENST00000459902 ATXN2Q99700 1313 aaKnown RBP6.28□□□□□ -1.4
CKAP2-204ENST00000459902 T-ENOLP0DO92 83 aa6.28□□□□□ -1.4
CKAP2-204ENST00000459902 ARL3P36405 182 aa6.28□□□□□ -1.4
CKAP2-204ENST00000459902 ZXDBP98169 803 aa6.28□□□□□ -1.4
CKAP2-204ENST00000459902 GOLGA8DPQ0D2H9 430 aa6.28□□□□□ -1.4
CKAP2-204ENST00000459902 MAMLD1Q13495 774 aa6.28□□□□□ -1.4
CKAP2-204ENST00000459902 EIF4A2Q14240 407 aaKnown RBP6.28□□□□□ -1.4
CKAP2-204ENST00000459902 NFATC4Q14934 902 aa6.28□□□□□ -1.4
CKAP2-204ENST00000459902 HLFQ16534 295 aa6.28□□□□□ -1.4
CKAP2-204ENST00000459902 KRT24Q2M2I5 525 aa6.28□□□□□ -1.4
CKAP2-204ENST00000459902 AMZ1Q400G9 498 aa6.28□□□□□ -1.4
CKAP2-204ENST00000459902 XKR9Q5GH70 373 aa6.28□□□□□ -1.4
CKAP2-204ENST00000459902 PAPPA-AS1Q5QFB9 102 aa6.28□□□□□ -1.4
CKAP2-204ENST00000459902 NCEH1Q6PIU2 408 aa6.28□□□□□ -1.4
CKAP2-204ENST00000459902 PQLC2Q6ZP29 291 aa6.28□□□□□ -1.4
CKAP2-204ENST00000459902 FOXRED2Q8IWF2 684 aa6.28□□□□□ -1.4
CKAP2-204ENST00000459902 ARHGAP12Q8IWW6 846 aa6.28□□□□□ -1.4
CKAP2-204ENST00000459902 PDILTQ8N807 584 aa6.28□□□□□ -1.4
CKAP2-204ENST00000459902 CREB3L4Q8TEY5 395 aa6.28□□□□□ -1.4
CKAP2-204ENST00000459902 TMEM68Q96MH6 324 aa6.28□□□□□ -1.4
CKAP2-204ENST00000459902 CHCHD6Q9BRQ6 235 aa6.28□□□□□ -1.4
CKAP2-204ENST00000459902 IFIH1Q9BYX4 1025 aaKnown RBP6.28□□□□□ -1.4
CKAP2-204ENST00000459902 IL25Q9H293 177 aa6.28□□□□□ -1.4
CKAP2-204ENST00000459902 PPP1R3EQ9H7J1 279 aa6.28□□□□□ -1.4
CKAP2-204ENST00000459902 NOX4Q9NPH5 578 aa6.28□□□□□ -1.4
CKAP2-204ENST00000459902 TINAGQ9UJW2 476 aa6.28□□□□□ -1.4
CKAP2-204ENST00000459902 CORO1CQ9ULV4 474 aaPredicted RBP6.28□□□□□ -1.4
CKAP2-204ENST00000459902 TRIP12Q14669 1992 aaPredicted RBP6.27□□□□□ -1.4
CKAP2-204ENST00000459902 LIPT2A6NK58 231 aa6.27□□□□□ -1.41
CKAP2-204ENST00000459902 AKR1B15C9JRZ8 316 aaPredicted RBP6.27□□□□□ -1.41
CKAP2-204ENST00000459902 SLC28A2O43868 658 aa6.27□□□□□ -1.41
CKAP2-204ENST00000459902 FCGR1AP12314 374 aa6.27□□□□□ -1.41
CKAP2-204ENST00000459902 RARGP13631 454 aa6.27□□□□□ -1.41
CKAP2-204ENST00000459902 CCKARP32238 428 aa6.27□□□□□ -1.41
CKAP2-204ENST00000459902 RAD23BP54727 409 aa6.27□□□□□ -1.41
CKAP2-204ENST00000459902 DSCR9P59020 149 aa6.27□□□□□ -1.41
CKAP2-204ENST00000459902 CRELD2Q6UXH1 353 aaPredicted RBP6.27□□□□□ -1.41
CKAP2-204ENST00000459902 TAOK1Q7L7X3 1001 aa6.27□□□□□ -1.41
CKAP2-204ENST00000459902 USP6NLQ92738 828 aa6.27□□□□□ -1.41
CKAP2-204ENST00000459902 IGSF8Q969P0 613 aa6.27□□□□□ -1.41
CKAP2-204ENST00000459902 SCMH1Q96GD3 660 aa6.27□□□□□ -1.41
CKAP2-204ENST00000459902 FIZ1Q96SL8 496 aa6.27□□□□□ -1.41
CKAP2-204ENST00000459902 CSF3RQ99062 836 aa6.27□□□□□ -1.41
CKAP2-204ENST00000459902 KXD1Q9BQD3 176 aa6.27□□□□□ -1.41
CKAP2-204ENST00000459902 RANGRFQ9HD47 186 aaPredicted RBP6.27□□□□□ -1.41
CKAP2-204ENST00000459902 MMP25Q9NPA2 562 aa6.27□□□□□ -1.41
CKAP2-204ENST00000459902 SNX9Q9Y5X1 595 aa6.27□□□□□ -1.41
CKAP2-204ENST00000459902 IGKV2D-30A0A075B6S6 120 aa6.26□□□□□ -1.41
CKAP2-204ENST00000459902 SRRM3A6NNA2 597 aaPredicted RBP6.26□□□□□ -1.41
CKAP2-204ENST00000459902 VCYO14598 125 aa6.26□□□□□ -1.41
CKAP2-204ENST00000459902 PLRG1O43660 514 aaKnown RBP6.26□□□□□ -1.41
CKAP2-204ENST00000459902 IPO7O95373 1038 aaKnown RBP6.26□□□□□ -1.41
CKAP2-204ENST00000459902 SCGB1D1O95968 90 aa6.26□□□□□ -1.41
CKAP2-204ENST00000459902 IGHV4-30-4P0DP06 118 aa6.26□□□□□ -1.41
CKAP2-204ENST00000459902 ACADMP11310 421 aa6.26□□□□□ -1.41
CKAP2-204ENST00000459902 DDX5P17844 614 aaKnown RBP6.26□□□□□ -1.41
CKAP2-204ENST00000459902 SEC61A1P61619 476 aaKnown RBP6.26□□□□□ -1.41
CKAP2-204ENST00000459902 NIPAL4Q0D2K0 466 aa6.26□□□□□ -1.41
CKAP2-204ENST00000459902 GRSF1Q12849 480 aaKnown RBP eCLIP6.26□□□□□ -1.41
CKAP2-204ENST00000459902 MYBPHQ13203 477 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms