RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 OR13H1Q8NG92 308 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 OR2I1PQ8NGU4 316 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 CEP76Q8TAP6 659 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 MAGOHBQ96A72 148 aaKnown RBP12.84□□□□□ -0.35
COL18A1-206ENST00000459895 PPP1R2P1Q96PQ5 205 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 TBL1YQ9BQ87 522 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 DDX47Q9H0S4 455 aaKnown RBP12.84□□□□□ -0.35
COL18A1-206ENST00000459895 GPR27Q9NS67 375 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 HOMER3Q9NSC5 361 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 CD84Q9UIB8 345 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 GVINP1Q7Z2Y8 2422 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 SDK1Q7Z5N4 2213 aa12.84□□□□□ -0.35
COL18A1-206ENST00000459895 PI4KAP42356 2102 aa12.83□□□□□ -0.35
COL18A1-206ENST00000459895 DNAH14Q0VDD8 3507 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 POM121BA6NF01 834 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 PRR5-ARHGAP8B1AHC4 643 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 K7ESM1 405 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 PSMD11O00231 422 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 AURKAO14965 403 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 KHNYNO15037 678 aaKnown RBP12.83□□□□□ -0.36
COL18A1-206ENST00000459895 CLDN7O95471 211 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 ZNF30P17039 623 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 ENGP17813 658 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 COILP38432 576 aaPredicted RBP12.83□□□□□ -0.36
COL18A1-206ENST00000459895 VPS41P49754 854 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 IRX4P78413 519 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 SGCGQ13326 291 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 SEMA5AQ13591 1074 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 AGERQ15109 404 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 TEAD4Q15561 434 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 TRIP13Q15645 432 aaPredicted RBP12.83□□□□□ -0.36
COL18A1-206ENST00000459895 PARP6Q2NL67 630 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 WSCD2Q2TBF2 565 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 AASDHQ4L235 1098 aaPredicted RBP12.83□□□□□ -0.36
COL18A1-206ENST00000459895 ALYREFQ86V81 257 aaKnown RBP12.83□□□□□ -0.36
COL18A1-206ENST00000459895 KIAA2013Q8IYS2 634 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 NDUFAF2Q8N183 169 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 PDCD7Q8N8D1 485 aaKnown RBP12.83□□□□□ -0.36
COL18A1-206ENST00000459895 PLA2G15Q8NCC3 412 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 ASB12Q8WXK4 309 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 CENPTQ96BT3 561 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 EID2BQ96D98 161 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 LENG8Q96PV6 779 aaPredicted RBP12.83□□□□□ -0.36
COL18A1-206ENST00000459895 C1QTNF7Q9BXJ2 289 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 NUSAP1Q9BXS6 441 aaKnown RBP12.83□□□□□ -0.36
COL18A1-206ENST00000459895 LRRC40Q9H9A6 602 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 RAB6BQ9NRW1 208 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 PIH1D1Q9NWS0 290 aaKnown RBP12.83□□□□□ -0.36
COL18A1-206ENST00000459895 PAK5Q9P286 719 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 SLC6A14Q9UN76 642 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 SHOC2Q9UQ13 582 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 DRG1Q9Y295 367 aaKnown RBP12.83□□□□□ -0.36
COL18A1-206ENST00000459895 AAR2Q9Y312 384 aaKnown RBP12.83□□□□□ -0.36
COL18A1-206ENST00000459895 SNX11Q9Y5W9 270 aa12.83□□□□□ -0.36
COL18A1-206ENST00000459895 CFAP54Q96N23 3096 aa12.82□□□□□ -0.36
COL18A1-206ENST00000459895 FPGTO14772 594 aa12.82□□□□□ -0.36
COL18A1-206ENST00000459895 VILLO15195 856 aa12.82□□□□□ -0.36
COL18A1-206ENST00000459895 GDF9O60383 454 aa12.82□□□□□ -0.36
COL18A1-206ENST00000459895 THEGLP0DJG4 465 aa12.82□□□□□ -0.36
COL18A1-206ENST00000459895 STIP1P31948 543 aaKnown RBP12.82□□□□□ -0.36
COL18A1-206ENST00000459895 ACTN2P35609 894 aa12.82□□□□□ -0.36
COL18A1-206ENST00000459895 FDFT1P37268 417 aa12.82□□□□□ -0.36
COL18A1-206ENST00000459895 CTSKP43235 329 aa12.82□□□□□ -0.36
COL18A1-206ENST00000459895 TNNT3P45378 269 aaPredicted RBP12.82□□□□□ -0.36
COL18A1-206ENST00000459895 NXPH1P58417 271 aa12.82□□□□□ -0.36
COL18A1-206ENST00000459895 BASP1P80723 227 aaKnown RBP12.82□□□□□ -0.36
COL18A1-206ENST00000459895 LRRC14Q15048 493 aa12.82□□□□□ -0.36
COL18A1-206ENST00000459895 KIF19Q2TAC6 998 aa12.82□□□□□ -0.36
COL18A1-206ENST00000459895 DENND5AQ6IQ26 1287 aa12.82□□□□□ -0.36
COL18A1-206ENST00000459895 ESRP1Q6NXG1 681 aaKnown RBP12.82□□□□□ -0.36
COL18A1-206ENST00000459895 Q6ZVL8 140 aa12.82□□□□□ -0.36
COL18A1-206ENST00000459895 GLT6D1Q7Z4J2 308 aa12.82□□□□□ -0.36
COL18A1-206ENST00000459895 SPATS2Q86XZ4 545 aaKnown RBP12.82□□□□□ -0.36
COL18A1-206ENST00000459895 TTC30BQ8N4P2 665 aa12.82□□□□□ -0.36
COL18A1-206ENST00000459895 BLOC1S5Q8TDH9 187 aa12.82□□□□□ -0.36
COL18A1-206ENST00000459895 BMFQ96LC9 184 aa12.82□□□□□ -0.36
COL18A1-206ENST00000459895 GTPBP2Q9BX10 602 aaKnown RBP12.82□□□□□ -0.36
COL18A1-206ENST00000459895 CAAP1Q9H8G2 361 aa12.82□□□□□ -0.36
COL18A1-206ENST00000459895 IL21RQ9HBE5 538 aa12.82□□□□□ -0.36
COL18A1-206ENST00000459895 ETNK1Q9HBU6 452 aa12.82□□□□□ -0.36
COL18A1-206ENST00000459895 ANKRD6Q9Y2G4 727 aa12.82□□□□□ -0.36
COL18A1-206ENST00000459895 GOLGA6CA6NDK9 693 aa12.81□□□□□ -0.36
COL18A1-206ENST00000459895 GOLGA6BA6NDN3 693 aa12.81□□□□□ -0.36
COL18A1-206ENST00000459895 ARHGAP33O14559 1287 aa12.81□□□□□ -0.36
COL18A1-206ENST00000459895 SOD1P00441 154 aa12.81□□□□□ -0.36
COL18A1-206ENST00000459895 EPOP01588 193 aa12.81□□□□□ -0.36
COL18A1-206ENST00000459895 KRT14P02533 472 aa12.81□□□□□ -0.36
COL18A1-206ENST00000459895 GOLGA6DP0CG33 693 aa12.81□□□□□ -0.36
COL18A1-206ENST00000459895 TERF1P54274 439 aa12.81□□□□□ -0.36
COL18A1-206ENST00000459895 C21orf59P57076 290 aa12.81□□□□□ -0.36
COL18A1-206ENST00000459895 PFN3P60673 137 aa12.81□□□□□ -0.36
COL18A1-206ENST00000459895 PTSQ03393 145 aa12.81□□□□□ -0.36
COL18A1-206ENST00000459895 C2orf54Q08AI8 447 aa12.81□□□□□ -0.36
COL18A1-206ENST00000459895 MTM1Q13496 603 aa12.81□□□□□ -0.36
COL18A1-206ENST00000459895 STAT4Q14765 748 aa12.81□□□□□ -0.36
COL18A1-206ENST00000459895 ALS2CLQ60I27 953 aa12.81□□□□□ -0.36
COL18A1-206ENST00000459895 RANBP10Q6VN20 620 aa12.81□□□□□ -0.36
COL18A1-206ENST00000459895 TECPR1Q7Z6L1 1165 aa12.81□□□□□ -0.36
COL18A1-206ENST00000459895 IQCHQ86VS3 1027 aa12.81□□□□□ -0.36
COL18A1-206ENST00000459895 KLHL7Q8IXQ5 586 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms