RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 CCNHP51946 323 aaPredicted RBP10.37□□□□□ -0.75
USP39-210ENST00000459775 PMS2P54278 862 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 GEMP55040 296 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 DMC1Q14565 340 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 POU6F1Q14863 301 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 TTC31Q49AM3 519 aaPredicted RBP10.37□□□□□ -0.75
USP39-210ENST00000459775 ALG1LQ6GMV1 187 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 FSTL4Q6MZW2 842 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 CASC4Q6P4E1 433 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 C4orf22Q6V702 233 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 BBS5Q8N3I7 341 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 MCUQ8NE86 351 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 FBXO36Q8NEA4 188 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 UBLCP1Q8WVY7 318 aaPredicted RBP10.37□□□□□ -0.75
USP39-210ENST00000459775 PTPRN2Q92932 1015 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 SIGLEC10Q96LC7 697 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 ALPK1Q96QP1 1244 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 NUDCD1Q96RS6 583 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 TRIM8Q9BZR9 551 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 CDC42EP4Q9H3Q1 356 aaKnown RBP10.37□□□□□ -0.75
USP39-210ENST00000459775 ARFGAP3Q9NP61 516 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 NINJ2Q9NZG7 142 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 CA14Q9ULX7 337 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 AAR2Q9Y312 384 aaKnown RBP10.37□□□□□ -0.75
USP39-210ENST00000459775 KCTD3Q9Y597 815 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 PCDHB9Q9Y5E1 797 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 PCDHGB3Q9Y5G1 929 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 SPO11Q9Y5K1 396 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 MAD1L1Q9Y6D9 718 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 CCL22O00626 93 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 AURKAO14965 403 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 SUN1O94901 812 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 SLC4A1P02730 911 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 SHBGP04278 402 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 APODP05090 189 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 UGT2B4P06133 528 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 MCM3P25205 808 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 HSD17B3P37058 310 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 MAGEA3P43357 314 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 ARL4CP56559 192 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 GPX6P59796 221 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 CAV1Q03135 178 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 TDGQ13569 410 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 MYLK3Q32MK0 819 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 SMUG1Q53HV7 270 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 ANKRD39Q53RE8 183 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 CARD16Q5EG05 197 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 ARSIQ5FYB1 569 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 LRRC8BQ6P9F7 803 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 SERPINA13PQ6UXR4 307 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 KLHDC8BQ8IXV7 354 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 PDIK1LQ8N165 341 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 STK40Q8N2I9 435 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 LINC00469Q8N7U9 141 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 LPCAT1Q8NF37 534 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 TNIP2Q8NFZ5 429 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 OR2AP1Q8NGE2 309 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 ACMSDQ8TDX5 336 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 RUBCNQ92622 972 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 CAVIN3Q969G5 261 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 TRIB3Q96RU7 358 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 LRRC40Q9H9A6 602 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 CHRAC1Q9NRG0 131 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 SARDHQ9UL12 918 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 NDRG2Q9UN36 371 aaKnown RBP10.37□□□□□ -0.75
USP39-210ENST00000459775 TECTAO75443 2155 aa10.37□□□□□ -0.75
USP39-210ENST00000459775 MIA3Q5JRA6 1907 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 RPSAP08865 295 aaKnown RBP10.36□□□□□ -0.75
USP39-210ENST00000459775 ALPIP09923 528 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 SKIV2L2P42285 1042 aaKnown RBP10.36□□□□□ -0.75
USP39-210ENST00000459775 SULT2A1Q06520 285 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 CDK18Q07002 472 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 SLC1A5Q15758 541 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 SLC44A4Q53GD3 710 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 SH2D4BQ5SQS7 431 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 EMBQ6PCB8 327 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 TPRG1Q6ZUI0 275 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 CENPUQ71F23 418 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 GBP7Q8N8V2 638 aaPredicted RBP10.36□□□□□ -0.75
USP39-210ENST00000459775 WFIKKN2Q8TEU8 576 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 HNRNPLLQ8WVV9 542 aaKnown RBP10.36□□□□□ -0.75
USP39-210ENST00000459775 IFT43Q96FT9 208 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 TDRD1Q9BXT4 1180 aaKnown RBP10.36□□□□□ -0.75
USP39-210ENST00000459775 SLC6A17Q9H1V8 727 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 EIF2B3Q9NR50 452 aaKnown RBP10.36□□□□□ -0.75
USP39-210ENST00000459775 SLC17A6Q9P2U8 582 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 SLC2A6Q9UGQ3 507 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 MTF2Q9Y483 593 aaPredicted RBP10.36□□□□□ -0.75
USP39-210ENST00000459775 TEX264Q9Y6I9 313 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 ATG2BQ96BY7 2078 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 LOC285095A0A1B0GVY8 99 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 GOLGA8KD6RF30 607 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 GOLGA8TH3BQL2 631 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 ALOX15BO15296 676 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 SIN3BO75182 1162 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 LEFTY1O75610 366 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 IGSF6O95976 241 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 HSPA9P38646 679 aaKnown RBP10.36□□□□□ -0.75
USP39-210ENST00000459775 NEK2P51955 445 aa10.36□□□□□ -0.75
USP39-210ENST00000459775 HNRNPH2P55795 449 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms