RNA–Protein interactions for RNA: ENST00000459727.5

HDAC3-202, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 524 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-202ENST00000459727 GPIP06744 558 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 ATXN1LP0C7T5 689 aaKnown RBP8.85□□□□□ -0.99
HDAC3-202ENST00000459727 ZNF37AP17032 561 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-202ENST00000459727 LBPP18428 481 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 PSMA3P25788 255 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 CHRNA4P43681 627 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 SLC11A2P49281 568 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 ZNF157P51786 506 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-202ENST00000459727 STC1P52823 247 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 NR1H2P55055 460 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 POLE2P56282 527 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 DSC2Q02487 901 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 LCP2Q13094 533 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 CNPY1Q3B7I2 92 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 C5orf22Q49AR2 442 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 CTXN3Q4LDR2 81 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 TMEM259Q4ZIN3 620 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 PAN2Q504Q3 1202 aaKnown RBP8.85□□□□□ -0.99
HDAC3-202ENST00000459727 VARS2Q5ST30 1063 aaKnown RBP8.85□□□□□ -0.99
HDAC3-202ENST00000459727 FAM182AQ5T1J6 154 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 RBM20Q5T481 1227 aaKnown RBP8.85□□□□□ -0.99
HDAC3-202ENST00000459727 OGFOD2Q6N063 350 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 UGT3A1Q6NUS8 523 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 RNF111Q6ZNA4 994 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 LARP4Q71RC2 724 aaKnown RBP eCLIP8.85□□□□□ -0.99
HDAC3-202ENST00000459727 FKBP9P1Q75LS8 142 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 PTAR1Q7Z6K3 402 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-202ENST00000459727 C14orf80Q86SX3 495 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 DHFR2Q86XF0 187 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 GALNT13Q8IUC8 556 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 STK40Q8N2I9 435 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 PIAS4Q8N2W9 510 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-202ENST00000459727 MINDY1Q8N5J2 469 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 ANKFN1Q8N957 763 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 KLHDC9Q8NEP7 349 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 TNIP2Q8NFZ5 429 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 ARRDC2Q8TBH0 407 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 HM13Q8TCT9 377 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 NAT14Q8WUY8 206 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 HDAC10Q969S8 669 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 KIAA1191Q96A73 305 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 ZNF597Q96LX8 424 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 RPRD1AQ96P16 312 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-202ENST00000459727 GCNAQ96QF7 691 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 OLFM1Q99784 485 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 MGME1Q9BQP7 344 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 AARSD1Q9BTE6 412 aaKnown RBP8.85□□□□□ -0.99
HDAC3-202ENST00000459727 C1QTNF3Q9BXJ4 246 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 NOL6Q9H6R4 1146 aaKnown RBP8.85□□□□□ -0.99
HDAC3-202ENST00000459727 NMUR1Q9HB89 426 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 RIC8BQ9NVN3 520 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.85□□□□□ -0.99
HDAC3-202ENST00000459727 MPP6Q9NZW5 540 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 GMIPQ9P107 970 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 TMEM181Q9P2C4 612 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 CACNG4Q9UBN1 327 aa8.85□□□□□ -0.99
HDAC3-202ENST00000459727 MYADML2A6NDP7 307 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 PDLIM1O00151 329 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 IFRD1O00458 451 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-202ENST00000459727 AZIN1O14977 448 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 LDB2O43679 373 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 MGEA5O60502 916 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 VPS26AO75436 327 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 TRPA1O75762 1119 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 ALDH1A1P00352 501 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 ASGR1P07306 291 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 MMP2P08253 660 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 UMPSP11172 480 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 BMP2P12643 396 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 HSD17B1P14061 328 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 GFAPP14136 432 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 HNRNPLP14866 589 aaKnown RBP eCLIP8.84□□□□□ -0.99
HDAC3-202ENST00000459727 CD1DP15813 335 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 IL10P22301 178 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 PSMA4P25789 261 aaKnown RBP8.84□□□□□ -0.99
HDAC3-202ENST00000459727 OR1E1P30953 314 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 TTPAP49638 278 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 AFF1P51825 1210 aaKnown RBP8.84□□□□□ -0.99
HDAC3-202ENST00000459727 RABGGTBP53611 331 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 CDH4P55283 916 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 PKNOX1P55347 436 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 TUBA4AP68366 448 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 FAM189BP81408 668 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 HTRA3P83110 453 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 TXNL4AP83876 142 aaKnown RBP8.84□□□□□ -0.99
HDAC3-202ENST00000459727 SLC10A7Q0GE19 358 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 EFEMP1Q12805 493 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 ZNF460Q14592 562 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 RPS6KA2Q15349 733 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 TAF1AQ15573 450 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-202ENST00000459727 GEN1Q17RS7 908 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 KIF19Q2TAC6 998 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 C10orf120Q5SQS8 335 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 ARTNQ5T4W7 220 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 INTS11Q5TA45 600 aaKnown RBP8.84□□□□□ -0.99
HDAC3-202ENST00000459727 KANK2Q63ZY3 851 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 TMEM198Q66K66 360 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 ANKS6Q68DC2 871 aa8.84□□□□□ -0.99
HDAC3-202ENST00000459727 NAIF1Q69YI7 327 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-202ENST00000459727 FBXL22Q6P050 247 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms