RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 HSPA1BP0DMV9 641 aaKnown RBP16.69■□□□□ 0.26
CCDC43-202ENST00000457422 CES1P23141 567 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 CORO1AP31146 461 aaKnown RBP16.69■□□□□ 0.26
CCDC43-202ENST00000457422 NUDT2P50583 147 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 ZNF140P52738 457 aaPredicted RBP16.69■□□□□ 0.26
CCDC43-202ENST00000457422 INHBCP55103 352 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.69■□□□□ 0.267e-6■□□□□ 10.9
CCDC43-202ENST00000457422 CHSY3Q70JA7 882 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 RPS27LQ71UM5 84 aaKnown RBP16.69■□□□□ 0.26
CCDC43-202ENST00000457422 HPS6Q86YV9 775 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 CDKN2AIPNLQ96HQ2 116 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 ZNF184Q99676 751 aaPredicted RBP16.69■□□□□ 0.26
CCDC43-202ENST00000457422 ALG9Q9H6U8 611 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 INTS10Q9NVR2 710 aaKnown RBP16.69■□□□□ 0.26
CCDC43-202ENST00000457422 TBC1D30Q9Y2I9 924 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 ANAPC1Q9H1A4 1944 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 ABLIM3O94929 683 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 PARNO95453 639 aaKnown RBP16.69■□□□□ 0.26
CCDC43-202ENST00000457422 IRF1P10914 325 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 CD1DP15813 335 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 ARHGEF6Q15052 776 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 ANO7Q6IWH7 933 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 DEFB128Q7Z7B8 93 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 SDCCAG8Q86SQ7 713 aaPredicted RBP16.69■□□□□ 0.26
CCDC43-202ENST00000457422 EFCAB3Q8N7B9 438 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 CCDC124Q96CT7 223 aaKnown RBP16.69■□□□□ 0.26
CCDC43-202ENST00000457422 IGSF21Q96ID5 467 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 EXOC2Q96KP1 924 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 TTC1Q99614 292 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 CLSTN3Q9BQT9 956 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 AARSD1Q9BTE6 412 aaKnown RBP16.69■□□□□ 0.26
CCDC43-202ENST00000457422 PPP1R12CQ9BZL4 782 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 GKN1Q9NS71 199 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 TRPM5Q9NZQ8 1165 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 STK39Q9UEW8 545 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 SPO11Q9Y5K1 396 aa16.69■□□□□ 0.26
CCDC43-202ENST00000457422 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.68■□□□□ 0.26
CCDC43-202ENST00000457422 AIM2O14862 343 aa16.68■□□□□ 0.26
CCDC43-202ENST00000457422 RHOCP08134 193 aa16.68■□□□□ 0.26
CCDC43-202ENST00000457422 ZNF37AP17032 561 aaPredicted RBP16.68■□□□□ 0.26
CCDC43-202ENST00000457422 CDC25CP30307 473 aa16.68■□□□□ 0.26
CCDC43-202ENST00000457422 KCNC1P48547 511 aa16.68■□□□□ 0.26
CCDC43-202ENST00000457422 ZNF177Q13360 481 aaPredicted RBP16.68■□□□□ 0.26
CCDC43-202ENST00000457422 ZNF678Q5SXM1 525 aa16.68■□□□□ 0.26
CCDC43-202ENST00000457422 DSELQ8IZU8 1212 aa16.68■□□□□ 0.26
CCDC43-202ENST00000457422 ZNF461Q8TAF7 563 aa16.68■□□□□ 0.26
CCDC43-202ENST00000457422 RHEBL1Q8TAI7 183 aa16.68■□□□□ 0.26
CCDC43-202ENST00000457422 ZNF296Q8WUU4 475 aaPredicted RBP16.68■□□□□ 0.26
CCDC43-202ENST00000457422 WBP2Q969T9 261 aa16.68■□□□□ 0.26
CCDC43-202ENST00000457422 PTERQ96BW5 349 aa16.68■□□□□ 0.26
CCDC43-202ENST00000457422 PHF21BQ96EK2 531 aa16.68■□□□□ 0.26
CCDC43-202ENST00000457422 TRMT2BQ96GJ1 504 aaKnown RBP16.68■□□□□ 0.26
CCDC43-202ENST00000457422 SERPINI1Q99574 410 aa16.68■□□□□ 0.26
CCDC43-202ENST00000457422 TDRD1Q9BXT4 1180 aaKnown RBP16.68■□□□□ 0.26
CCDC43-202ENST00000457422 HIPK3Q9H422 1215 aa16.68■□□□□ 0.26
CCDC43-202ENST00000457422 TNFRSF12AQ9NP84 129 aa16.68■□□□□ 0.26
CCDC43-202ENST00000457422 POLR3BQ9NW08 1133 aaPredicted RBP16.68■□□□□ 0.26
CCDC43-202ENST00000457422 FIS1Q9Y3D6 152 aa16.68■□□□□ 0.26
CCDC43-202ENST00000457422 TSPAN3O60637 253 aa16.68■□□□□ 0.26
CCDC43-202ENST00000457422 FKTNO75072 461 aa16.68■□□□□ 0.26
CCDC43-202ENST00000457422 PRSS56P0CW18 603 aa16.68■□□□□ 0.26
CCDC43-202ENST00000457422 PLD1Q13393 1074 aa16.68■□□□□ 0.26
CCDC43-202ENST00000457422 TAF1AQ15573 450 aaPredicted RBP16.68■□□□□ 0.26
CCDC43-202ENST00000457422 ADGRF1Q5T601 910 aa16.68■□□□□ 0.26
CCDC43-202ENST00000457422 TPGS2Q68CL5 300 aa16.68■□□□□ 0.26
CCDC43-202ENST00000457422 KIAA1841Q6NSI8 718 aa16.68■□□□□ 0.26
CCDC43-202ENST00000457422 KBTBD2Q8IY47 623 aa16.68■□□□□ 0.26
CCDC43-202ENST00000457422 PGAM4Q8N0Y7 254 aa16.68■□□□□ 0.26
CCDC43-202ENST00000457422 KLF16Q9BXK1 252 aaPredicted RBP16.68■□□□□ 0.26
CCDC43-202ENST00000457422 COL4A6Q14031 1691 aa16.67■□□□□ 0.26
CCDC43-202ENST00000457422 PLXNA4Q9HCM2 1894 aa16.67■□□□□ 0.26
CCDC43-202ENST00000457422 SMIM24O75264 130 aa16.67■□□□□ 0.26
CCDC43-202ENST00000457422 SKAP2O75563 359 aaPredicted RBP16.67■□□□□ 0.26
CCDC43-202ENST00000457422 PRLP01236 227 aa16.67■□□□□ 0.26
CCDC43-202ENST00000457422 F11P03951 625 aa16.67■□□□□ 0.26
CCDC43-202ENST00000457422 SCNN1BP51168 640 aa16.67■□□□□ 0.26
CCDC43-202ENST00000457422 ATN1P54259 1190 aaPredicted RBP16.67■□□□□ 0.26
CCDC43-202ENST00000457422 DSG1Q02413 1049 aa16.67■□□□□ 0.26
CCDC43-202ENST00000457422 CYTH1Q15438 398 aa16.67■□□□□ 0.26
CCDC43-202ENST00000457422 TCHHL1Q5QJ38 904 aaPredicted RBP16.67■□□□□ 0.26
CCDC43-202ENST00000457422 IRGCQ6NXR0 463 aa16.67■□□□□ 0.26
CCDC43-202ENST00000457422 AFTPHQ6ULP2 937 aa16.67■□□□□ 0.26
CCDC43-202ENST00000457422 DHDDSQ86SQ9 333 aa16.67■□□□□ 0.26
CCDC43-202ENST00000457422 KBTBD6Q86V97 674 aa16.67■□□□□ 0.26
CCDC43-202ENST00000457422 PYDC1Q8WXC3 89 aa16.67■□□□□ 0.26
CCDC43-202ENST00000457422 RCN3Q96D15 328 aa16.67■□□□□ 0.26
CCDC43-202ENST00000457422 SCUBE2Q9NQ36 999 aa16.67■□□□□ 0.26
CCDC43-202ENST00000457422 STOML2Q9UJZ1 356 aa16.67■□□□□ 0.26
CCDC43-202ENST00000457422 AGO1Q9UL18 857 aaKnown RBP16.67■□□□□ 0.26
CCDC43-202ENST00000457422 YIPF1Q9Y548 306 aa16.67■□□□□ 0.26
CCDC43-202ENST00000457422 PMLP29590 882 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 C1QTNF8P60827 252 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 HERVK_113P63132 956 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 MRPS35P82673 323 aaKnown RBP16.66■□□□□ 0.26
CCDC43-202ENST00000457422 ZNF783Q6ZMS7 281 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 C16orf59Q7L2K0 433 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 GLT6D1Q7Z4J2 308 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 SLC26A7Q8TE54 656 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 ASB2Q96Q27 587 aa16.66■□□□□ 0.26
CCDC43-202ENST00000457422 TCF12Q99081 682 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms