RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 ZNF202O95125 648 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 FYNP06241 537 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 EZRP15311 586 aaKnown RBP5.47□□□□□ -1.53
VPS41-209ENST00000457055 ATF6P18850 670 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 ACO1P21399 889 aaKnown RBP5.47□□□□□ -1.53
VPS41-209ENST00000457055 SERPINF1P36955 418 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 ETV4P43268 484 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 MAGEA1P43355 309 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 BMXP51813 675 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 TAS2R40P59535 323 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 CEBPZQ03701 1054 aaKnown RBP5.47□□□□□ -1.53
VPS41-209ENST00000457055 PPATQ06203 517 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 SMARCB1Q12824 385 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 NPRL3Q12980 569 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 IL24Q13007 206 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 CBFBQ13951 182 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 E2F2Q14209 437 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 LRRC32Q14392 662 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 WDR72Q3MJ13 1102 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 AARS2Q5JTZ9 985 aaKnown RBP5.47□□□□□ -1.53
VPS41-209ENST00000457055 SAPCD1Q5SSQ6 148 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 CLVS2Q5SYC1 327 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 CEP85LQ5SZL2 805 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 TTC22Q5TAA0 569 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 ARHGAP17Q68EM7 881 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 SPECC1LQ69YQ0 1117 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 NOTUMQ6P988 496 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 KLHDC10Q6PID8 442 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 ARMCX2Q7L311 632 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 OTOAQ7RTW8 1153 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 MIER3Q7Z3K6 550 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 POLNQ7Z5Q5 900 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 ASPGQ86U10 573 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 SRRM1Q8IYB3 904 aaKnown RBP5.47□□□□□ -1.53
VPS41-209ENST00000457055 HACE1Q8IYU2 909 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 ZCCHC7Q8N3Z6 543 aaKnown RBP5.47□□□□□ -1.53
VPS41-209ENST00000457055 BANPQ8N9N5 519 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 ICA1LQ8NDH6 482 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 METTL6Q8TCB7 284 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 OSCP1Q8WVF1 389 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 DNAJA4Q8WW22 397 aaPredicted RBP5.47□□□□□ -1.53
VPS41-209ENST00000457055 MVB12AQ96EY5 273 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 ZNF503Q96F45 646 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 OR14A2Q96R54 314 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 PANX2Q96RD6 677 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 MTG1Q9BT17 334 aaPredicted RBP5.47□□□□□ -1.53
VPS41-209ENST00000457055 TEX12Q9BXU0 123 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 ITPAQ9BY32 194 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 SLC26A1Q9H2B4 701 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 SLC52A2Q9HAB3 445 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 EMC7Q9NPA0 242 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 C12orf4Q9NQ89 552 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 SLC35C2Q9NQQ7 365 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 ZNF446Q9NWS9 450 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 TMEM160Q9NX00 188 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 TMOD3Q9NYL9 352 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.47□□□□□ -1.53
VPS41-209ENST00000457055 APPL1Q9UKG1 709 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 TMCO1Q9UM00 188 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 ARHGEF28Q8N1W1 1705 aaKnown RBP5.47□□□□□ -1.53
VPS41-209ENST00000457055 PEAK1Q9H792 1746 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 KIAA1210Q9ULL0 1709 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 IGSF1Q8N6C5 1336 aa5.47□□□□□ -1.53
VPS41-209ENST00000457055 TUBGCP6Q96RT7 1819 aa5.46□□□□□ -1.53
VPS41-209ENST00000457055 TRAV34A0A0B4J273 112 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 FAM90A27PA6NNH2 459 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 B4E1Z4 1266 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 GOLGA8KD6RF30 607 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 AQP7O14520 342 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 RRP8O43159 456 aaKnown RBP5.46□□□□□ -1.54
VPS41-209ENST00000457055 GPRIN2O60269 458 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 PLA2G6O60733 806 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 MTX2O75431 263 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 RBBP9O75884 186 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 MYO1DO94832 1006 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 METTL18O95568 372 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 DIRAS3O95661 229 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 CSTAP01040 98 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 CSF2P04141 144 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 ALPPP05187 535 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 EIF2S1P05198 315 aaKnown RBP5.46□□□□□ -1.54
VPS41-209ENST00000457055 FHP07954 510 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 HNRNPA1P09651 372 aaKnown RBP eCLIP5.46□□□□□ -1.54
VPS41-209ENST00000457055 ALPPL2P10696 532 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 ODC1P11926 461 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 NAGAP17050 411 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 CTSSP25774 331 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 PCSK1P29120 753 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 MAT2AP31153 395 aaKnown RBP5.46□□□□□ -1.54
VPS41-209ENST00000457055 LSSP48449 732 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 CASP9P55211 416 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 YPEL5P62699 121 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 PRAMEP78395 509 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 PDE1BQ01064 536 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 PTH1RQ03431 593 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 ENPEPQ07075 957 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 ABHD18Q0P651 414 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 SLC12A1Q13621 1099 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 SPIDRQ14159 915 aa5.46□□□□□ -1.54
VPS41-209ENST00000457055 RRS1Q15050 365 aaKnown RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms