RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 TRHDEQ9UKU6 1024 aa12.46□□□□□ -0.42
LINC00959-201ENST00000456581 PRPF19Q9UMS4 504 aaKnown RBP12.46□□□□□ -0.42
LINC00959-201ENST00000456581 RAD54BQ9Y620 910 aa12.46□□□□□ -0.42
LINC00959-201ENST00000456581 SMIM31A0A1B0GVY4 71 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 ARHGEF37A1IGU5 675 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 TPST1O60507 370 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 FKTNO75072 461 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 TIPRLO75663 272 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 BCAS2O75934 225 aaPredicted RBP12.45□□□□□ -0.42
LINC00959-201ENST00000456581 KCNQ1P51787 676 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 MAPK10P53779 464 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 PSME3P61289 254 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 PRAMEP78395 509 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 SULT2A1Q06520 285 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 PRKAA1Q13131 559 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 AGKQ53H12 422 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 ZNF354CQ86Y25 554 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 EXT2Q93063 718 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 HMCESQ96FZ2 354 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 C8orf48Q96LL4 319 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 SERPINB11Q96P15 392 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 ACOT9Q9Y305 439 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 ACTL7AQ9Y615 435 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 CEPT1Q9Y6K0 416 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 UNC80Q8N2C7 3258 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 SLC12A8A0AV02 714 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 ZNF839A8K0R7 811 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 PDLIM1O00151 329 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 PPP6CO00743 305 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 SYN3O14994 580 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 MTSS1O43312 755 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 FAM58BPP0C7Q3 252 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 B3GNT6Q6ZMB0 384 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 CFAP52Q8N1V2 620 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 RTL3Q8N8U3 475 aaKnown RBP12.45□□□□□ -0.42
LINC00959-201ENST00000456581 GAB3Q8WWW8 586 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 PABPC5Q96DU9 382 aaKnown RBP12.45□□□□□ -0.42
LINC00959-201ENST00000456581 FUBP3Q96I24 572 aaKnown RBP eCLIP12.45□□□□□ -0.42
LINC00959-201ENST00000456581 OLFM1Q99784 485 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 RHOJQ9H4E5 214 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 SOX17Q9H6I2 414 aaPredicted RBP12.45□□□□□ -0.42
LINC00959-201ENST00000456581 EFCAB1Q9HAE3 211 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 EPS15L1Q9UBC2 864 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 IPO11Q9UI26 975 aaKnown RBP12.45□□□□□ -0.42
LINC00959-201ENST00000456581 TLR6Q9Y2C9 796 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 GREB1Q4ZG55 1949 aa12.45□□□□□ -0.42
LINC00959-201ENST00000456581 AP1G1O43747 822 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 ATF6P18850 670 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 HOXC13P31276 330 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 SLC10A7Q0GE19 358 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 TMED1Q13445 227 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 PRPSAP1Q14558 356 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 DENND5AQ6IQ26 1287 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 HMBOX1Q6NT76 420 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 FBXL22Q6P050 247 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 BEND5Q7L4P6 421 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 CHST15Q7LFX5 561 aaPredicted RBP12.44□□□□□ -0.42
LINC00959-201ENST00000456581 SREK1Q8WXA9 508 aaKnown RBP12.44□□□□□ -0.42
LINC00959-201ENST00000456581 LPGAT1Q92604 370 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 IL22Q9GZX6 179 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 CATSPERBQ9H7T0 1116 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 GLOD4Q9HC38 313 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.44□□□□□ -0.42
LINC00959-201ENST00000456581 MARCH2Q9P0N8 246 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 TNFAIP8O95379 198 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 CDH2P19022 906 aaPredicted RBP12.44□□□□□ -0.42
LINC00959-201ENST00000456581 CHRM3P20309 590 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 CCNCP24863 283 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 KCNC1P48547 511 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 RAB10P61026 200 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 COG7P83436 770 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 BFSP2Q13515 415 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 SLC12A1Q13621 1099 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 MAP7Q14244 749 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 ZNF683Q8IZ20 524 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 CRIPAKQ8N1N5 446 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 ANKRD49Q8WVL7 239 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 SEPT8Q92599 483 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 PSMG2Q969U7 264 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 TSNARE1Q96NA8 513 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 IL12RB2Q99665 862 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 DCUN1D5Q9BTE7 237 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 CCDC28BQ9BUN5 200 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 VN1R3Q9BXE9 311 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 FBXO44Q9H4M3 255 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 RAB26Q9ULW5 256 aa12.44□□□□□ -0.42
LINC00959-201ENST00000456581 LRRC14BA6NHZ5 514 aa12.43□□□□□ -0.42
LINC00959-201ENST00000456581 UBFD1O14562 309 aaKnown RBP12.43□□□□□ -0.42
LINC00959-201ENST00000456581 MATN3O15232 486 aa12.43□□□□□ -0.42
LINC00959-201ENST00000456581 SEC24DO94855 1032 aaPredicted RBP12.43□□□□□ -0.42
LINC00959-201ENST00000456581 STMN1P16949 149 aa12.43□□□□□ -0.42
LINC00959-201ENST00000456581 CSRP3P50461 194 aa12.43□□□□□ -0.42
LINC00959-201ENST00000456581 CDH13P55290 713 aa12.43□□□□□ -0.42
LINC00959-201ENST00000456581 ITKQ08881 620 aa12.43□□□□□ -0.42
LINC00959-201ENST00000456581 CDH17Q12864 832 aa12.43□□□□□ -0.42
LINC00959-201ENST00000456581 APOFQ13790 326 aa12.43□□□□□ -0.42
LINC00959-201ENST00000456581 PIM3Q86V86 326 aa12.43□□□□□ -0.42
LINC00959-201ENST00000456581 CPSF7Q8N684 471 aaKnown RBP12.43□□□□□ -0.42
LINC00959-201ENST00000456581 SPPL2BQ8TCT7 592 aa12.43□□□□□ -0.42
LINC00959-201ENST00000456581 PPWD1Q96BP3 646 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms