RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 ZNF140P52738 457 aaPredicted RBP11□□□□□ -0.65
SCN9A-205ENST00000454569 TAS2R38P59533 333 aa11□□□□□ -0.65
SCN9A-205ENST00000454569 FAM193AP78312 1265 aa11□□□□□ -0.65
SCN9A-205ENST00000454569 PTSQ03393 145 aa11□□□□□ -0.65
SCN9A-205ENST00000454569 RALGDSQ12967 914 aa11□□□□□ -0.65
SCN9A-205ENST00000454569 CRYMQ14894 314 aa11□□□□□ -0.65
SCN9A-205ENST00000454569 FBXO43Q4G163 708 aa11□□□□□ -0.65
SCN9A-205ENST00000454569 TRMT10CQ7L0Y3 403 aaKnown RBP11□□□□□ -0.65
SCN9A-205ENST00000454569 TMPRSS6Q8IU80 811 aa11□□□□□ -0.65
SCN9A-205ENST00000454569 SPNS2Q8IVW8 549 aa11□□□□□ -0.65
SCN9A-205ENST00000454569 PAF1Q8N7H5 531 aa11□□□□□ -0.65
SCN9A-205ENST00000454569 OR2T3Q8NH03 318 aa11□□□□□ -0.65
SCN9A-205ENST00000454569 BRSK1Q8TDC3 778 aa11□□□□□ -0.65
SCN9A-205ENST00000454569 LRRC39Q96DD0 335 aa11□□□□□ -0.65
SCN9A-205ENST00000454569 LRIG1Q96JA1 1093 aa11□□□□□ -0.65
SCN9A-205ENST00000454569 ZIM3Q96PE6 472 aa11□□□□□ -0.65
SCN9A-205ENST00000454569 MCCC1Q96RQ3 725 aaPredicted RBP11□□□□□ -0.65
SCN9A-205ENST00000454569 RANBP9Q96S59 729 aa11□□□□□ -0.65
SCN9A-205ENST00000454569 MOCS1Q9NZB8 636 aa11□□□□□ -0.65
SCN9A-205ENST00000454569 DKK3Q9UBP4 350 aa11□□□□□ -0.65
SCN9A-205ENST00000454569 PLAAQ9Y263 795 aa11□□□□□ -0.65
SCN9A-205ENST00000454569 RPS6KL1Q9Y6S9 549 aa11□□□□□ -0.65
SCN9A-205ENST00000454569 FAM169AQ9Y6X4 670 aa11□□□□□ -0.65
SCN9A-205ENST00000454569 ABCA7Q8IZY2 2146 aa11□□□□□ -0.65
SCN9A-205ENST00000454569 A0A1W2PP55 124 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 TCRBV9S1A1TA0A576 114 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 FOXO6A8MYZ6 492 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 UPK3BL1B0FP48 263 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 UPK3BL2E5RIL1 263 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 AGPSO00116 658 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 MAP2K7O14733 419 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 NPC1O15118 1278 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 GPR39O43194 453 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 SYNCRIPO60506 623 aaKnown RBP10.99□□□□□ -0.65
SCN9A-205ENST00000454569 GPR37L1O60883 481 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 DCNP07585 359 aaKnown RBP10.99□□□□□ -0.65
SCN9A-205ENST00000454569 C1SP09871 688 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 ERVK-10P10266 1014 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 GABRG2P18507 467 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 ITGB7P26010 798 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 ARCN1P48444 511 aaKnown RBP10.99□□□□□ -0.65
SCN9A-205ENST00000454569 CDKN1CP49918 316 aaPredicted RBP10.99□□□□□ -0.65
SCN9A-205ENST00000454569 RPL26P61254 145 aaKnown RBP10.99□□□□□ -0.65
SCN9A-205ENST00000454569 GRM3Q14832 879 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 CST6Q15828 149 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 CRY1Q16526 586 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 PIP5KL1Q5T9C9 394 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 GLT6D1Q7Z4J2 308 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 UBALD2Q8IYN6 164 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 PPHLN1Q8NEY8 458 aaKnown RBP10.99□□□□□ -0.65
SCN9A-205ENST00000454569 OR4K2Q8NGD2 314 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 MRRFQ96E11 262 aaKnown RBP10.99□□□□□ -0.65
SCN9A-205ENST00000454569 TBATAQ96M53 351 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 OSBPL1AQ9BXW6 950 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 TSPYL1Q9H0U9 437 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 ACBD3Q9H3P7 528 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 MAGEE1Q9HCI5 957 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 IL17CQ9P0M4 197 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 RPL26L1Q9UNX3 145 aaKnown RBP10.99□□□□□ -0.65
SCN9A-205ENST00000454569 C1orf232A0A0U1RR37 186 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 HEATR9A2RTY3 570 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 CFAP99D6REC4 459 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 GAPDHSO14556 408 aaPredicted RBP10.99□□□□□ -0.65
SCN9A-205ENST00000454569 FAM155BO75949 473 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 USP1O94782 785 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 ALDH1A2O94788 518 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 VAPBO95292 243 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 ADRB3P13945 408 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 CA4P22748 312 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 TAF1AQ15573 450 aaPredicted RBP10.99□□□□□ -0.65
SCN9A-205ENST00000454569 KBTBD12Q3ZCT8 623 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 AGBL4Q5VU57 503 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 LRRC66Q68CR7 880 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 SDE2Q6IQ49 451 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 BRAT1Q6PJG6 821 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.99□□□□□ -0.65
SCN9A-205ENST00000454569 ERN2Q76MJ5 926 aaKnown RBP10.99□□□□□ -0.65
SCN9A-205ENST00000454569 HSD11B1LQ7Z5J1 315 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.99□□□□□ -0.65
SCN9A-205ENST00000454569 CBARPQ8N350 705 aaPredicted RBP10.99□□□□□ -0.65
SCN9A-205ENST00000454569 HDAC10Q969S8 669 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 FUBP1Q96AE4 644 aaKnown RBP10.99□□□□□ -0.65
SCN9A-205ENST00000454569 MRGPRX1Q96LB2 322 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 LYSMD1Q96S90 227 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 AGAP2Q99490 1192 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 WRAP53Q9BUR4 548 aaKnown RBP10.99□□□□□ -0.65
SCN9A-205ENST00000454569 MRM3Q9HC36 420 aaKnown RBP10.99□□□□□ -0.65
SCN9A-205ENST00000454569 SAMD15Q9P1V8 674 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 EBF1Q9UH73 591 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 FKBPLQ9UIM3 349 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 COQ6Q9Y2Z9 468 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 PSAT1Q9Y617 370 aa10.99□□□□□ -0.65
SCN9A-205ENST00000454569 ZDBF2Q9HCK1 2354 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 TCRBV21S2A2A0A5A6 115 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 MAGEB16A2A368 324 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 CCDC162PA2VCL2 907 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 CHURC1-FNTBB4DL54 471 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 TK2O00142 265 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 AREL1O15033 823 aa10.98□□□□□ -0.65
SCN9A-205ENST00000454569 POLBP06746 335 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms