RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 C6orf10Q5SRN2 563 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 PAQR3Q6TCH7 311 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.99□□□□□ -0.492e-6■■■□□ 17.7
SMPD4-213ENST00000454468 CDK15Q96Q40 435 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 GPR21Q99679 349 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 ECSITQ9BQ95 431 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 KLHL4Q9C0H6 718 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.99□□□□□ -0.49
SMPD4-213ENST00000454468 FKBPLQ9UIM3 349 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 TRMT6Q9UJA5 497 aaKnown RBP11.99□□□□□ -0.49
SMPD4-213ENST00000454468 SCML2Q9UQR0 700 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 MUSKO15146 869 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 FKBP6O75344 327 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 SELPP16109 830 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 ACADSP16219 412 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 ME2P23368 584 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 CAP1Q01518 475 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 DEFB115Q30KQ5 88 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 DNAJB14Q8TBM8 379 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 SH3RF2Q8TEC5 729 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 STYXQ8WUJ0 223 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 AGO1Q9UL18 857 aaKnown RBP11.99□□□□□ -0.49
SMPD4-213ENST00000454468 SLC4A7Q9Y6M7 1214 aa11.99□□□□□ -0.49
SMPD4-213ENST00000454468 A0A087X1B8 175 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 NPEPPSL1A6NEC2 478 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 SLC38A8A6NNN8 435 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 TNFRSF10BO14763 440 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 NIPSNAP2O75323 286 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 SH3BGRLO75368 114 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 ARNTP27540 789 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 CLCN5P51795 746 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 MGAT3Q09327 533 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 CDC16Q13042 620 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 BFSP2Q13515 415 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 TRIP4Q15650 581 aaPredicted RBP11.98□□□□□ -0.49
SMPD4-213ENST00000454468 KIAA0930Q6ICG6 404 aaPredicted RBP11.98□□□□□ -0.49
SMPD4-213ENST00000454468 TLDC1Q6P9B6 456 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 FAM151BQ6UXP7 276 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 DNAJC14Q6Y2X3 702 aaPredicted RBP11.98□□□□□ -0.49
SMPD4-213ENST00000454468 CYS1Q717R9 158 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 CDYL2Q8N8U2 506 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 MMADHCQ9H3L0 296 aaPredicted RBP11.98□□□□□ -0.49
SMPD4-213ENST00000454468 NOL6Q9H6R4 1146 aaKnown RBP11.98□□□□□ -0.49
SMPD4-213ENST00000454468 MKS1Q9NXB0 559 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 SEPT3Q9UH03 358 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 PLXNA1Q9UIW2 1896 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 OR1I1O60431 355 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 CRTAMO95727 393 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 ALPIP09923 528 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 EEF1DP29692 281 aaKnown RBP11.98□□□□□ -0.49
SMPD4-213ENST00000454468 PSME3P61289 254 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 CREB5Q02930 508 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 VPS26BQ4G0F5 336 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 RARS2Q5T160 578 aaKnown RBP11.98□□□□□ -0.49
SMPD4-213ENST00000454468 MFSD4BQ5TF39 518 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 CD300LGQ6UXG3 332 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 ARL14EPQ8N8R7 260 aaPredicted RBP11.98□□□□□ -0.49
SMPD4-213ENST00000454468 FAM210AQ96ND0 272 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 TSGA13Q96PP4 275 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 ACOX2Q99424 681 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 TNKS2Q9H2K2 1166 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 SRRDQ9UH36 339 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 BCAP29Q9UHQ4 241 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 RNF103-CHMP3A0A140T963 221 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 SAC3D1A6NKF1 404 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 ACSL4O60488 711 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 H2AFYO75367 372 aaKnown RBP11.98□□□□□ -0.49
SMPD4-213ENST00000454468 EOMESO95936 686 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 CHEK2O96017 543 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 CYP11A1P05108 521 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 HGFP14210 728 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 MC4RP32245 332 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 RGRP47804 291 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 RAD51Q06609 339 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 CILP2Q8IUL8 1156 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 MTFMTQ96DP5 389 aaKnown RBP11.98□□□□□ -0.49
SMPD4-213ENST00000454468 ZBED2Q9BTP6 218 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 OLA1Q9NTK5 396 aaKnown RBP11.98□□□□□ -0.49
SMPD4-213ENST00000454468 TMEM161AQ9NX61 479 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 TAS2R13Q9NYV9 303 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 SORCS3Q9UPU3 1222 aa11.98□□□□□ -0.49
SMPD4-213ENST00000454468 MYOCOSA0A1B0GUC4 107 aa11.97□□□□□ -0.49
SMPD4-213ENST00000454468 C2orf78A6NCI8 922 aa11.97□□□□□ -0.49
SMPD4-213ENST00000454468 CDC7O00311 574 aa11.97□□□□□ -0.49
SMPD4-213ENST00000454468 FFAR3O14843 346 aa11.97□□□□□ -0.49
SMPD4-213ENST00000454468 PFDN6O15212 129 aa11.97□□□□□ -0.49
SMPD4-213ENST00000454468 GPR42O15529 346 aa11.97□□□□□ -0.49
SMPD4-213ENST00000454468 GRID2O43424 1007 aa11.97□□□□□ -0.49
SMPD4-213ENST00000454468 RPS6KA3P51812 740 aa11.97□□□□□ -0.49
SMPD4-213ENST00000454468 ARMC12Q5T9G4 340 aa11.97□□□□□ -0.49
SMPD4-213ENST00000454468 TXNDC8Q6A555 127 aa11.97□□□□□ -0.49
SMPD4-213ENST00000454468 MAB21L3Q8N8X9 362 aa11.97□□□□□ -0.49
SMPD4-213ENST00000454468 SIDT2Q8NBJ9 832 aaKnown RBP11.97□□□□□ -0.49
SMPD4-213ENST00000454468 SPPL2BQ8TCT7 592 aa11.97□□□□□ -0.49
SMPD4-213ENST00000454468 IMP4Q96G21 291 aaKnown RBP11.97□□□□□ -0.49
SMPD4-213ENST00000454468 SIKE1Q9BRV8 207 aa11.97□□□□□ -0.49
SMPD4-213ENST00000454468 HIPK3Q9H422 1215 aa11.97□□□□□ -0.49
SMPD4-213ENST00000454468 CIDEBQ9UHD4 219 aa11.97□□□□□ -0.49
SMPD4-213ENST00000454468 ADAMTS6Q9UKP5 1117 aa11.97□□□□□ -0.49
SMPD4-213ENST00000454468 PKP3Q9Y446 797 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms