RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 FAM87AP0C7U9 286 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 MYCLP1P12525 358 aaPredicted RBP11.69□□□□□ -0.54
GARNL3-210ENST00000453030 CCNB1P14635 433 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 PNLIPP16233 465 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 CDK11BP21127 795 aaKnown RBP11.69□□□□□ -0.54
GARNL3-210ENST00000453030 TNFAIP3P21580 790 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 AK4P27144 223 aaPredicted RBP11.69□□□□□ -0.54
GARNL3-210ENST00000453030 MIPP30301 263 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 TRIM23P36406 574 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 GNPDA1P46926 289 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 OR1D5P58170 312 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 AP1S1P61966 158 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 POLR2LP62875 67 aaKnown RBP11.69□□□□□ -0.54
GARNL3-210ENST00000453030 NFKB2Q00653 900 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 IL10RBQ08334 325 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 SLC10A7Q0GE19 358 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 RFTN1Q14699 578 aaPredicted RBP11.69□□□□□ -0.54
GARNL3-210ENST00000453030 LBRQ14739 615 aaKnown RBP11.69□□□□□ -0.54
GARNL3-210ENST00000453030 C16orf72Q14CZ0 275 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 TSR1Q2NL82 804 aaKnown RBP11.69□□□□□ -0.54
GARNL3-210ENST00000453030 LINC00303Q3SY05 128 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 TMCO4Q5TGY1 634 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 PNCKQ6P2M8 343 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 OGFOD3Q6PK18 319 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 CYP4V2Q6ZWL3 525 aaPredicted RBP11.69□□□□□ -0.54
GARNL3-210ENST00000453030 RCBTB1Q8NDN9 531 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 ZDHHC1Q8WTX9 485 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 PATE1Q8WXA2 126 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 JPH3Q8WXH2 748 aaPredicted RBP11.69□□□□□ -0.54
GARNL3-210ENST00000453030 COL26A1Q96A83 441 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 EIF3CQ99613 913 aaKnown RBP11.69□□□□□ -0.54
GARNL3-210ENST00000453030 NUDT22Q9BRQ3 303 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 PHPT1Q9NRX4 125 aaPredicted RBP11.69□□□□□ -0.54
GARNL3-210ENST00000453030 SPATS2LQ9NUQ6 558 aaKnown RBP11.69□□□□□ -0.54
GARNL3-210ENST00000453030 ANO10Q9NW15 660 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 SEPT10Q9P0V9 454 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 SEPT3Q9UH03 358 aa11.69□□□□□ -0.54
GARNL3-210ENST00000453030 RHPN2P1A8MT19 583 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 PDE2AO00408 941 aaPredicted RBP11.68□□□□□ -0.54
GARNL3-210ENST00000453030 CPNE6O95741 557 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 HOXC4P09017 264 aaPredicted RBP11.68□□□□□ -0.54
GARNL3-210ENST00000453030 CCDC172P0C7W6 258 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 ATP1A3P13637 1013 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 WT1P19544 449 aaPredicted RBP11.68□□□□□ -0.54
GARNL3-210ENST00000453030 LHCGRP22888 699 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 ALDH4A1P30038 563 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 VIPR1P32241 457 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 ETV3P41162 512 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 RENBPP51606 427 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 CYP4F2P78329 520 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 NSUN2Q08J23 767 aaKnown RBP eCLIP11.68□□□□□ -0.54
GARNL3-210ENST00000453030 ILF3Q12906 894 aaKnown RBP eCLIP11.68□□□□□ -0.54
GARNL3-210ENST00000453030 BIRC2Q13490 618 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 DPYSQ14117 519 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 STX1AQ16623 288 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 SMTNL2Q2TAL5 461 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 RAET1GQ6H3X3 334 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 PLEKHA7Q6IQ23 1121 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 DOK6Q6PKX4 331 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 SLC30A9Q6PML9 568 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 SASS6Q6UVJ0 657 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 RBM43Q6ZSC3 357 aaKnown RBP11.68□□□□□ -0.54
GARNL3-210ENST00000453030 APTXQ7Z2E3 356 aaKnown RBP11.68□□□□□ -0.54
GARNL3-210ENST00000453030 NRROSQ86YC3 692 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 PTCD2Q8WV60 388 aaKnown RBP11.68□□□□□ -0.54
GARNL3-210ENST00000453030 TMEM159Q96B96 161 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 COQ10AQ96MF6 247 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 PSKH2Q96QS6 385 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 SYT11Q9BT88 431 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 GSDMCQ9BYG8 508 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 ZMYND15Q9H091 742 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 CWC15Q9P013 229 aaKnown RBP11.68□□□□□ -0.54
GARNL3-210ENST00000453030 TAAR2Q9P1P5 351 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 SUFUQ9UMX1 484 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 PCDHB11Q9Y5F2 797 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 PCDHGC4Q9Y5F7 938 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 FLNCQ14315 2725 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 NBASA2RRP1 2371 aa11.68□□□□□ -0.54
GARNL3-210ENST00000453030 ZNF106Q9H2Y7 1883 aaKnown RBP11.68□□□□□ -0.54
GARNL3-210ENST00000453030 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.67□□□□□ -0.54
GARNL3-210ENST00000453030 LRRC53A6NM62 1247 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 SOCS5O75159 536 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 LRCH4O75427 683 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 HEXIM1O94992 359 aaKnown RBP11.67□□□□□ -0.54
GARNL3-210ENST00000453030 WISP1O95388 367 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 ECEL1O95672 775 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 ITGB2P05107 769 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 CCL4P13236 92 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 MAXP61244 160 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 CDK3Q00526 305 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 B4GALNT1Q00973 533 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 KCNC4Q03721 635 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 TRAF2Q12933 501 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 PTPRRQ15256 657 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 ASIC2Q16515 512 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 PPP1R2P3Q6NXS1 205 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 HSD11B1LQ7Z5J1 315 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 IRF2BP2Q7Z5L9 587 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 TSPAN33Q86UF1 283 aa11.67□□□□□ -0.54
GARNL3-210ENST00000453030 PIM3Q86V86 326 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms