RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 ADAMTS14Q8WXS8 1223 aa19.99■□□□□ 0.79
COL9A3-202ENST00000452372 FCRL5Q96RD9 977 aa19.99■□□□□ 0.79
COL9A3-202ENST00000452372 ELF4Q99607 663 aaPredicted RBP19.99■□□□□ 0.79
COL9A3-202ENST00000452372 USP29Q9HBJ7 922 aa19.99■□□□□ 0.79
COL9A3-202ENST00000452372 MBNL1Q9NR56 388 aaKnown RBP19.99■□□□□ 0.79
COL9A3-202ENST00000452372 PCDHGB2Q9Y5G2 931 aa19.99■□□□□ 0.79
COL9A3-202ENST00000452372 NPIPB15A6NHN6 443 aaPredicted RBP19.98■□□□□ 0.79
COL9A3-202ENST00000452372 ANKRD66B4E2M5 251 aa19.98■□□□□ 0.79
COL9A3-202ENST00000452372 RECQL5O94762 991 aaPredicted RBP19.98■□□□□ 0.79
COL9A3-202ENST00000452372 MT-CYBP00156 380 aaPredicted RBP19.98■□□□□ 0.79
COL9A3-202ENST00000452372 ALPIP09923 528 aa19.98■□□□□ 0.79
COL9A3-202ENST00000452372 FTH1P19P0C7X4 201 aa19.98■□□□□ 0.79
COL9A3-202ENST00000452372 NFKB1P19838 968 aa19.98■□□□□ 0.79
COL9A3-202ENST00000452372 RABIFP47224 123 aa19.98■□□□□ 0.79
COL9A3-202ENST00000452372 CCDC173Q0VFZ6 552 aa19.98■□□□□ 0.79
COL9A3-202ENST00000452372 PTPRRQ15256 657 aa19.98■□□□□ 0.79
COL9A3-202ENST00000452372 CNGA3Q16281 694 aa19.98■□□□□ 0.79
COL9A3-202ENST00000452372 WSCD2Q2TBF2 565 aa19.98■□□□□ 0.79
COL9A3-202ENST00000452372 PRAMEF14Q5SWL7 426 aa19.98■□□□□ 0.79
COL9A3-202ENST00000452372 LPCAT1Q8NF37 534 aa19.98■□□□□ 0.79
COL9A3-202ENST00000452372 SLC35B2Q8TB61 432 aa19.98■□□□□ 0.79
COL9A3-202ENST00000452372 TRIB3Q96RU7 358 aa19.98■□□□□ 0.79
COL9A3-202ENST00000452372 ADGRE3Q9BY15 652 aa19.98■□□□□ 0.79
COL9A3-202ENST00000452372 GPR27Q9NS67 375 aa19.98■□□□□ 0.79
COL9A3-202ENST00000452372 TOR4AQ9NXH8 423 aa19.98■□□□□ 0.79
COL9A3-202ENST00000452372 KCTD5Q9NXV2 234 aa19.98■□□□□ 0.79
COL9A3-202ENST00000452372 RALYQ9UKM9 306 aaKnown RBP19.98■□□□□ 0.79
COL9A3-202ENST00000452372 R3HDM2Q9Y2K5 976 aaKnown RBP19.98■□□□□ 0.79
COL9A3-202ENST00000452372 JRKLQ9Y4A0 524 aa19.98■□□□□ 0.79
COL9A3-202ENST00000452372 A0A1B0GTQ1 180 aa19.97■□□□□ 0.79
COL9A3-202ENST00000452372 TMEM8BA6NDV4 472 aa19.97■□□□□ 0.79
COL9A3-202ENST00000452372 PSMD11O00231 422 aa19.97■□□□□ 0.79
COL9A3-202ENST00000452372 TAF4O00268 1085 aa19.97■□□□□ 0.79
COL9A3-202ENST00000452372 TOR1BO14657 336 aa19.97■□□□□ 0.79
COL9A3-202ENST00000452372 KCNN4O15554 427 aa19.97■□□□□ 0.79
COL9A3-202ENST00000452372 GM2AP17900 193 aa19.97■□□□□ 0.79
COL9A3-202ENST00000452372 LHCGRP22888 699 aa19.97■□□□□ 0.79
COL9A3-202ENST00000452372 IGFALSP35858 605 aa19.97■□□□□ 0.79
COL9A3-202ENST00000452372 PFN3P60673 137 aa19.97■□□□□ 0.79
COL9A3-202ENST00000452372 CDK18Q07002 472 aa19.97■□□□□ 0.79
COL9A3-202ENST00000452372 ARHGEF7Q14155 803 aa19.97■□□□□ 0.79
COL9A3-202ENST00000452372 ACOX1Q15067 660 aa19.97■□□□□ 0.79
COL9A3-202ENST00000452372 QPCTQ16769 361 aa19.97■□□□□ 0.79
COL9A3-202ENST00000452372 CRTC1Q6UUV9 634 aa19.97■□□□□ 0.79
COL9A3-202ENST00000452372 PTAR1Q7Z6K3 402 aaPredicted RBP19.97■□□□□ 0.79
COL9A3-202ENST00000452372 TSPAN33Q86UF1 283 aa19.97■□□□□ 0.79
COL9A3-202ENST00000452372 SLC22A18ASQ8N1D0 253 aa19.97■□□□□ 0.79
COL9A3-202ENST00000452372 OXR1Q8N573 874 aa19.97■□□□□ 0.79
COL9A3-202ENST00000452372 SETD7Q8WTS6 366 aaKnown RBP19.97■□□□□ 0.79
COL9A3-202ENST00000452372 COQ10AQ96MF6 247 aa19.97■□□□□ 0.79
COL9A3-202ENST00000452372 SMIM14Q96QK8 99 aa19.97■□□□□ 0.79
COL9A3-202ENST00000452372 LYSMD1Q96S90 227 aa19.97■□□□□ 0.79
COL9A3-202ENST00000452372 MLPHQ9BV36 600 aaPredicted RBP19.97■□□□□ 0.79
COL9A3-202ENST00000452372 TRMT1Q9NXH9 659 aaKnown RBP19.97■□□□□ 0.79
COL9A3-202ENST00000452372 FAM153AQ9UHL3 310 aa19.97■□□□□ 0.79
COL9A3-202ENST00000452372 DNPEPQ9ULA0 475 aa19.97■□□□□ 0.79
COL9A3-202ENST00000452372 BTBD3Q9Y2F9 522 aa19.97■□□□□ 0.79
COL9A3-202ENST00000452372 ARID1BQ8NFD5 2236 aaPredicted RBP19.96■□□□□ 0.79
COL9A3-202ENST00000452372 CAPN8A6NHC0 703 aa19.96■□□□□ 0.79
COL9A3-202ENST00000452372 SRRM3A6NNA2 597 aaPredicted RBP19.96■□□□□ 0.79
COL9A3-202ENST00000452372 PMPCBO75439 489 aa19.96■□□□□ 0.79
COL9A3-202ENST00000452372 STK10O94804 968 aaKnown RBP19.96■□□□□ 0.79
COL9A3-202ENST00000452372 DKK1O94907 266 aa19.96■□□□□ 0.79
COL9A3-202ENST00000452372 RXRGP48443 463 aa19.96■□□□□ 0.79
COL9A3-202ENST00000452372 YPEL5P62699 121 aa19.96■□□□□ 0.79
COL9A3-202ENST00000452372 IRF4Q15306 451 aa19.96■□□□□ 0.79
COL9A3-202ENST00000452372 PCSK7Q16549 785 aa19.96■□□□□ 0.79
COL9A3-202ENST00000452372 ANKRD20A2Q5SQ80 823 aa19.96■□□□□ 0.79
COL9A3-202ENST00000452372 ANKRD20A1Q5TYW2 823 aa19.96■□□□□ 0.79
COL9A3-202ENST00000452372 ANKRD20A3Q5VUR7 823 aa19.96■□□□□ 0.79
COL9A3-202ENST00000452372 ITPRIPL1Q6GPH6 555 aa19.96■□□□□ 0.79
COL9A3-202ENST00000452372 IFT43Q96FT9 208 aa19.96■□□□□ 0.79
COL9A3-202ENST00000452372 FRMD8P1Q9BZ68 369 aaPredicted RBP19.96■□□□□ 0.79
COL9A3-202ENST00000452372 UBP1Q9NZI7 540 aa19.96■□□□□ 0.79
COL9A3-202ENST00000452372 ACACAQ13085 2346 aa19.96■□□□□ 0.79
COL9A3-202ENST00000452372 APC2O95996 2303 aa19.95■□□□□ 0.78
COL9A3-202ENST00000452372 C5orf60A6NFR6 353 aa19.95■□□□□ 0.78
COL9A3-202ENST00000452372 PCDHGA12O60330 932 aa19.95■□□□□ 0.78
COL9A3-202ENST00000452372 EPOP01588 193 aa19.95■□□□□ 0.78
COL9A3-202ENST00000452372 ZNF30P17039 623 aa19.95■□□□□ 0.78
COL9A3-202ENST00000452372 ARRB1P49407 418 aaPredicted RBP19.95■□□□□ 0.78
COL9A3-202ENST00000452372 CCT8P50990 548 aa19.95■□□□□ 0.78
COL9A3-202ENST00000452372 PTSQ03393 145 aa19.95■□□□□ 0.78
COL9A3-202ENST00000452372 MPP3Q13368 585 aa19.95■□□□□ 0.78
COL9A3-202ENST00000452372 SUZ12Q15022 739 aaKnown RBP19.95■□□□□ 0.78
COL9A3-202ENST00000452372 SHBQ15464 509 aa19.95■□□□□ 0.78
COL9A3-202ENST00000452372 ZNF569Q5MCW4 686 aa19.95■□□□□ 0.78
COL9A3-202ENST00000452372 LRRC66Q68CR7 880 aa19.95■□□□□ 0.78
COL9A3-202ENST00000452372 DENND2CQ68D51 928 aa19.95■□□□□ 0.78
COL9A3-202ENST00000452372 KDELC1Q6UW63 502 aa19.95■□□□□ 0.78
COL9A3-202ENST00000452372 KDELC2Q7Z4H8 507 aa19.95■□□□□ 0.78
COL9A3-202ENST00000452372 HSD11B1LQ7Z5J1 315 aa19.95■□□□□ 0.78
COL9A3-202ENST00000452372 OXNAD1Q96HP4 312 aaPredicted RBP19.95■□□□□ 0.78
COL9A3-202ENST00000452372 SPATA13Q96N96 652 aa19.95■□□□□ 0.78
COL9A3-202ENST00000452372 GBA3Q9H227 469 aa19.95■□□□□ 0.78
COL9A3-202ENST00000452372 RSPH14Q9UHP6 348 aa19.95■□□□□ 0.78
COL9A3-202ENST00000452372 SPTY2D1-AS1A0A0U1RR47 76 aa19.94■□□□□ 0.78
COL9A3-202ENST00000452372 LOC285095A0A1B0GVY8 99 aa19.94■□□□□ 0.78
COL9A3-202ENST00000452372 YKT6O15498 198 aa19.94■□□□□ 0.78
COL9A3-202ENST00000452372 KIF5CO60282 957 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms