RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 ALG6Q9Y672 507 aa21.73■■□□□ 1.07
C9orf3-208ENST00000451893 A0A1W2PQ67 120 aa21.72■■□□□ 1.07
C9orf3-208ENST00000451893 A8MX80 341 aa21.72■■□□□ 1.07
C9orf3-208ENST00000451893 LMO7DNF2Z398 122 aa21.72■■□□□ 1.07
C9orf3-208ENST00000451893 USP12O75317 370 aa21.72■■□□□ 1.07
C9orf3-208ENST00000451893 TNFP01375 233 aa21.72■■□□□ 1.07
C9orf3-208ENST00000451893 TSHRP16473 764 aa21.72■■□□□ 1.07
C9orf3-208ENST00000451893 KELP23276 732 aa21.72■■□□□ 1.07
C9orf3-208ENST00000451893 HK3P52790 923 aa21.72■■□□□ 1.07
C9orf3-208ENST00000451893 CKAP4Q07065 602 aaKnown RBP21.72■■□□□ 1.07
C9orf3-208ENST00000451893 ITKQ08881 620 aa21.72■■□□□ 1.07
C9orf3-208ENST00000451893 MTM1Q13496 603 aa21.72■■□□□ 1.07
C9orf3-208ENST00000451893 DENND2CQ68D51 928 aa21.72■■□□□ 1.07
C9orf3-208ENST00000451893 CYP4V2Q6ZWL3 525 aaPredicted RBP21.72■■□□□ 1.07
C9orf3-208ENST00000451893 POLNQ7Z5Q5 900 aa21.72■■□□□ 1.07
C9orf3-208ENST00000451893 TEKT4Q8WW24 435 aa21.72■■□□□ 1.07
C9orf3-208ENST00000451893 VOPP1Q96AW1 172 aa21.72■■□□□ 1.07
C9orf3-208ENST00000451893 HES6Q96HZ4 224 aa21.72■■□□□ 1.07
C9orf3-208ENST00000451893 WDR92Q96MX6 357 aa21.72■■□□□ 1.07
C9orf3-208ENST00000451893 CSPG4P5Q96PW8 444 aa21.72■■□□□ 1.07
C9orf3-208ENST00000451893 PSKH2Q96QS6 385 aa21.72■■□□□ 1.07
C9orf3-208ENST00000451893 PCDHB1Q9Y5F3 818 aa21.72■■□□□ 1.07
C9orf3-208ENST00000451893 CHD6Q8TD26 2715 aa21.71■■□□□ 1.07
C9orf3-208ENST00000451893 DMXL2Q8TDJ6 3036 aa21.71■■□□□ 1.07
C9orf3-208ENST00000451893 GOLGA6CA6NDK9 693 aa21.71■■□□□ 1.07
C9orf3-208ENST00000451893 GOLGA6BA6NDN3 693 aa21.71■■□□□ 1.07
C9orf3-208ENST00000451893 GCATO75600 419 aa21.71■■□□□ 1.07
C9orf3-208ENST00000451893 RECQL5O94762 991 aaPredicted RBP21.71■■□□□ 1.07
C9orf3-208ENST00000451893 FTCDO95954 541 aa21.71■■□□□ 1.07
C9orf3-208ENST00000451893 CPP00450 1065 aa21.71■■□□□ 1.07
C9orf3-208ENST00000451893 GOLGA6DP0CG33 693 aa21.71■■□□□ 1.07
C9orf3-208ENST00000451893 MAN1A1P33908 653 aa21.71■■□□□ 1.07
C9orf3-208ENST00000451893 SRP54P61011 504 aaKnown RBP21.71■■□□□ 1.07
C9orf3-208ENST00000451893 GABREP78334 506 aa21.71■■□□□ 1.07
C9orf3-208ENST00000451893 SLC10A7Q0GE19 358 aa21.71■■□□□ 1.07
C9orf3-208ENST00000451893 MARC1Q5VT66 337 aa21.71■■□□□ 1.07
C9orf3-208ENST00000451893 ZSWIM9Q86XI8 627 aa21.71■■□□□ 1.07
C9orf3-208ENST00000451893 LSMEM2Q8N112 164 aa21.71■■□□□ 1.07
C9orf3-208ENST00000451893 FGF11Q92914 225 aa21.71■■□□□ 1.07
C9orf3-208ENST00000451893 OSBPL9Q96SU4 736 aa21.71■■□□□ 1.07
C9orf3-208ENST00000451893 PCDH18Q9HCL0 1135 aa21.71■■□□□ 1.07
C9orf3-208ENST00000451893 GOLGA6AQ9NYA3 693 aa21.71■■□□□ 1.07
C9orf3-208ENST00000451893 A0A087WV48 116 aa21.7■■□□□ 1.06
C9orf3-208ENST00000451893 EME2A4GXA9 379 aaPredicted RBP21.7■■□□□ 1.06
C9orf3-208ENST00000451893 CFAP69A5D8W1 941 aa21.7■■□□□ 1.06
C9orf3-208ENST00000451893 YY2O15391 372 aa21.7■■□□□ 1.06
C9orf3-208ENST00000451893 MPOP05164 745 aa21.7■■□□□ 1.06
C9orf3-208ENST00000451893 CYP2A6P11509 494 aaPredicted RBP21.7■■□□□ 1.06
C9orf3-208ENST00000451893 KRT10P13645 584 aa21.7■■□□□ 1.06
C9orf3-208ENST00000451893 TCF4P15884 667 aa21.7■■□□□ 1.06
C9orf3-208ENST00000451893 MMP13P45452 471 aa21.7■■□□□ 1.06
C9orf3-208ENST00000451893 MESDQ14696 234 aa21.7■■□□□ 1.06
C9orf3-208ENST00000451893 RBM44Q6ZP01 1051 aaKnown RBP21.7■■□□□ 1.06
C9orf3-208ENST00000451893 DPPA4Q7L190 304 aa21.7■■□□□ 1.06
C9orf3-208ENST00000451893 TP53INP2Q8IXH6 220 aa21.7■■□□□ 1.06
C9orf3-208ENST00000451893 NDUFAF2Q8N183 169 aa21.7■■□□□ 1.06
C9orf3-208ENST00000451893 UBL4BQ8N7F7 174 aa21.7■■□□□ 1.06
C9orf3-208ENST00000451893 NIPA2Q8N8Q9 360 aa21.7■■□□□ 1.06
C9orf3-208ENST00000451893 PCDH19Q8TAB3 1148 aa21.7■■□□□ 1.06
C9orf3-208ENST00000451893 LGMNQ99538 433 aa21.7■■□□□ 1.06
C9orf3-208ENST00000451893 PADI4Q9UM07 663 aa21.7■■□□□ 1.06
C9orf3-208ENST00000451893 GPR34Q9UPC5 381 aa21.7■■□□□ 1.06
C9orf3-208ENST00000451893 PCDHGC4Q9Y5F7 938 aa21.7■■□□□ 1.06
C9orf3-208ENST00000451893 LY6G6EA0A0G2JKS1 128 aa21.69■■□□□ 1.06
C9orf3-208ENST00000451893 TTC24A2A3L6 582 aaPredicted RBP21.69■■□□□ 1.06
C9orf3-208ENST00000451893 SOCS5O75159 536 aa21.69■■□□□ 1.06
C9orf3-208ENST00000451893 PROSCO94903 275 aa21.69■■□□□ 1.06
C9orf3-208ENST00000451893 PAFAH1B1P43034 410 aa21.69■■□□□ 1.06
C9orf3-208ENST00000451893 ARHGEF7Q14155 803 aa21.69■■□□□ 1.06
C9orf3-208ENST00000451893 SPIDRQ14159 915 aa21.69■■□□□ 1.06
C9orf3-208ENST00000451893 ALG11Q2TAA5 492 aa21.69■■□□□ 1.06
C9orf3-208ENST00000451893 LIPIQ6XZB0 460 aa21.69■■□□□ 1.06
C9orf3-208ENST00000451893 SLC35F3Q8IY50 421 aa21.69■■□□□ 1.06
C9orf3-208ENST00000451893 ARL10Q8N8L6 244 aa21.69■■□□□ 1.06
C9orf3-208ENST00000451893 KCTD6Q8NC69 237 aa21.69■■□□□ 1.06
C9orf3-208ENST00000451893 WDR48Q8TAF3 677 aa21.69■■□□□ 1.06
C9orf3-208ENST00000451893 ECHDC3Q96DC8 303 aa21.69■■□□□ 1.06
C9orf3-208ENST00000451893 NUS1Q96E22 293 aa21.69■■□□□ 1.06
C9orf3-208ENST00000451893 NUDCD1Q96RS6 583 aa21.69■■□□□ 1.06
C9orf3-208ENST00000451893 BOCQ9BWV1 1114 aa21.69■■□□□ 1.06
C9orf3-208ENST00000451893 WDR26Q9H7D7 661 aa21.69■■□□□ 1.06
C9orf3-208ENST00000451893 ETNK2Q9NVF9 386 aa21.69■■□□□ 1.06
C9orf3-208ENST00000451893 TTLL3Q9Y4R7 772 aa21.69■■□□□ 1.06
C9orf3-208ENST00000451893 U3KQA8 63 aa21.69■■□□□ 1.06
C9orf3-208ENST00000451893 FREM2Q5SZK8 3169 aa21.69■■□□□ 1.06
C9orf3-208ENST00000451893 CCDC66A2RUB6 948 aa21.68■■□□□ 1.06
C9orf3-208ENST00000451893 PDE2AO00408 941 aaPredicted RBP21.68■■□□□ 1.06
C9orf3-208ENST00000451893 TLX3O43711 291 aaPredicted RBP21.68■■□□□ 1.06
C9orf3-208ENST00000451893 TGM2P21980 687 aa21.68■■□□□ 1.06
C9orf3-208ENST00000451893 CTNNA2P26232 953 aa21.68■■□□□ 1.06
C9orf3-208ENST00000451893 EIF2S3P41091 472 aaKnown RBP21.68■■□□□ 1.06
C9orf3-208ENST00000451893 MAXP61244 160 aa21.68■■□□□ 1.06
C9orf3-208ENST00000451893 AGERQ15109 404 aa21.68■■□□□ 1.06
C9orf3-208ENST00000451893 TBC1D25Q3MII6 688 aa21.68■■□□□ 1.06
C9orf3-208ENST00000451893 C3orf38Q5JPI3 329 aa21.68■■□□□ 1.06
C9orf3-208ENST00000451893 CDCP2Q5VXM1 449 aa21.68■■□□□ 1.06
C9orf3-208ENST00000451893 FOXR1Q6PIV2 292 aa21.68■■□□□ 1.06
C9orf3-208ENST00000451893 TAF8Q7Z7C8 310 aa21.68■■□□□ 1.06
C9orf3-208ENST00000451893 MAP7D3Q8IWC1 876 aa21.68■■□□□ 1.06
C9orf3-208ENST00000451893 SDR16C5Q8N3Y7 309 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms