RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 CCNCP24863 283 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 NFKBIAP25963 317 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 CD86P42081 329 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 ARHGAP25P42331 645 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 MAGEA1P43355 309 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 PEX5P50542 639 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 BLKP51451 505 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 ZNF75DP51815 510 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 RP1P56715 2156 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 KIAA1024LP59773 190 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 ELOCQ15369 112 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 C6orf132Q5T0Z8 1188 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 LRRC66Q68CR7 880 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 ESRP1Q6NXG1 681 aaKnown RBP9.69□□□□□ -0.86
USP54-207ENST00000451492 PNCKQ6P2M8 343 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 FOXR1Q6PIV2 292 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 RFLNAQ6ZTI6 216 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 KDELC2Q7Z4H8 507 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 HEATR4Q86WZ0 1026 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 GKN2Q86XP6 184 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 CCDC50Q8IVM0 306 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 TEX26Q8N6G2 289 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 OR56A4Q8NGH8 313 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 ATL2Q8NHH9 583 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 HNRNPLLQ8WVV9 542 aaKnown RBP9.69□□□□□ -0.86
USP54-207ENST00000451492 GLMNQ92990 594 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 HAUS1Q96CS2 278 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 FAF2Q96CS3 445 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 HDAC11Q96DB2 347 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 COQ10AQ96MF6 247 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 TDRD1Q9BXT4 1180 aaKnown RBP9.69□□□□□ -0.86
USP54-207ENST00000451492 CYP4F12Q9HCS2 524 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 FGF22Q9HCT0 170 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 GPR34Q9UPC5 381 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 CSNK1G3Q9Y6M4 447 aa9.69□□□□□ -0.86
USP54-207ENST00000451492 DSPP15924 2871 aaKnown RBP9.69□□□□□ -0.86
USP54-207ENST00000451492 KIF26BQ2KJY2 2108 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 A0A1W2PQ67 120 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 PRSS38A1L453 326 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 SOWAHDA6NJG2 315 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 C3orf70A6NLC5 250 aaPredicted RBP9.68□□□□□ -0.86
USP54-207ENST00000451492 LMO7DNF2Z398 122 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 BRINP1O60477 761 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 CSO75390 466 aaKnown RBP9.68□□□□□ -0.86
USP54-207ENST00000451492 MTA2O94776 668 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 CAPNS1P04632 268 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 KRT10P13645 584 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 E2F1Q01094 437 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 NIPAL4Q0D2K0 466 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 GALNT3Q14435 633 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 IHHQ14623 411 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 AGERQ15109 404 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 PCSK7Q16549 785 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 C3orf38Q5JPI3 329 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 MFSD7Q6UXD7 560 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 Q6ZVL8 140 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 TAF8Q7Z7C8 310 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 TRIM74Q86UV6 250 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 LRRC49Q8IUZ0 686 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 SFTPA2Q8IWL1 248 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 RHOT1Q8IXI2 618 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 NDUFAF2Q8N183 169 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 FSTL5Q8N475 847 aaPredicted RBP9.68□□□□□ -0.86
USP54-207ENST00000451492 FAM181AQ8N9Y4 354 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 CCL4L1Q8NHW4 92 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 TPCN2Q8NHX9 752 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 PTCD2Q8WV60 388 aaKnown RBP9.68□□□□□ -0.86
USP54-207ENST00000451492 PIH1D2Q8WWB5 315 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 MAML1Q92585 1016 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 DTD2Q96FN9 168 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 AGAP3Q96P47 875 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 DEPDC7Q96QD5 511 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 RBM15Q96T37 977 aaKnown RBP eCLIP9.68□□□□□ -0.86
USP54-207ENST00000451492 CCDC3Q9BQI4 270 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 BOCQ9BWV1 1114 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 BRD8Q9H0E9 1235 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 TMEM168Q9H0V1 697 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 CARS2Q9HA77 564 aaKnown RBP9.68□□□□□ -0.86
USP54-207ENST00000451492 PCDH9Q9HC56 1237 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 HAUS2Q9NVX0 235 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 DDX56Q9NY93 547 aaKnown RBP9.68□□□□□ -0.86
USP54-207ENST00000451492 SALL4Q9UJQ4 1053 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 PADI4Q9UM07 663 aa9.68□□□□□ -0.86
USP54-207ENST00000451492 ARHGEF17Q96PE2 2063 aaPredicted RBP9.67□□□□□ -0.86
USP54-207ENST00000451492 A0A0J9YYE9 177 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 C1orf232A0A0U1RR37 186 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 EME2A4GXA9 379 aaPredicted RBP9.67□□□□□ -0.86
USP54-207ENST00000451492 CFAP69A5D8W1 941 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 CAPN8A6NHC0 703 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 TPP1O14773 563 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 PPP1R12AO14974 1030 aaPredicted RBP9.67□□□□□ -0.86
USP54-207ENST00000451492 INPP4BO15327 924 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 FZD6O60353 706 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 USP12O75317 370 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 CLDN7O95471 211 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 TRBC1P01850 177 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 MPOP05164 745 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 GP1BAP07359 652 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 PIRTP0C851 137 aa9.67□□□□□ -0.86
USP54-207ENST00000451492 MYCLP1P12525 358 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms